RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 SDSP20132 328 aa18.99■□□□□ 0.63
DDX41-214ENST00000512334 OSBPP22059 807 aa18.99■□□□□ 0.63
DDX41-214ENST00000512334 KIF22Q14807 665 aa18.99■□□□□ 0.63
DDX41-214ENST00000512334 CCDC17Q96LX7 622 aa18.99■□□□□ 0.63
DDX41-214ENST00000512334 MKNK2Q9HBH9 465 aa18.99■□□□□ 0.63
DDX41-214ENST00000512334 DIAPH3Q9NSV4 1193 aa18.99■□□□□ 0.63
DDX41-214ENST00000512334 ADGRA2Q96PE1 1338 aa18.99■□□□□ 0.63
DDX41-214ENST00000512334 ARHGEF6Q15052 776 aa18.98■□□□□ 0.63
DDX41-214ENST00000512334 PKN2Q16513 984 aaKnown RBP18.98■□□□□ 0.63
DDX41-214ENST00000512334 TTC22Q5TAA0 569 aa18.98■□□□□ 0.63
DDX41-214ENST00000512334 OTOP1Q7RTM1 612 aa18.98■□□□□ 0.63
DDX41-214ENST00000512334 ACER1Q8TDN7 264 aa18.98■□□□□ 0.63
DDX41-214ENST00000512334 EFCC1Q9HA90 598 aa18.98■□□□□ 0.63
DDX41-214ENST00000512334 ROBO3Q96MS0 1386 aa18.97■□□□□ 0.63
DDX41-214ENST00000512334 HIP1O00291 1037 aa18.97■□□□□ 0.63
DDX41-214ENST00000512334 USP14P54578 494 aa18.97■□□□□ 0.63
DDX41-214ENST00000512334 IRX3P78415 501 aaPredicted RBP18.97■□□□□ 0.63
DDX41-214ENST00000512334 LACTBP83111 547 aaPredicted RBP18.97■□□□□ 0.63
DDX41-214ENST00000512334 VPS53Q5VIR6 699 aa18.97■□□□□ 0.63
DDX41-214ENST00000512334 CWC27Q6UX04 472 aaKnown RBP18.97■□□□□ 0.63
DDX41-214ENST00000512334 ASCC2Q9H1I8 757 aaPredicted RBP18.97■□□□□ 0.63
DDX41-214ENST00000512334 ZNF287Q9HBT7 754 aa18.97■□□□□ 0.63
DDX41-214ENST00000512334 EMILIN3Q9NT22 766 aa18.97■□□□□ 0.63
DDX41-214ENST00000512334 SLC3A2P08195 630 aaKnown RBP18.96■□□□□ 0.63
DDX41-214ENST00000512334 GSPT1P15170 499 aaKnown RBP18.96■□□□□ 0.63
DDX41-214ENST00000512334 ICA1Q05084 483 aa18.96■□□□□ 0.63
DDX41-214ENST00000512334 PPARAQ07869 468 aa18.96■□□□□ 0.63
DDX41-214ENST00000512334 CENPQQ7L2Z9 268 aaPredicted RBP18.96■□□□□ 0.63
DDX41-214ENST00000512334 ZNF589Q86UQ0 364 aaPredicted RBP18.96■□□□□ 0.63
DDX41-214ENST00000512334 CLEC10AQ8IUN9 316 aa18.96■□□□□ 0.63
DDX41-214ENST00000512334 ARHGAP39Q9C0H5 1083 aa18.96■□□□□ 0.63
DDX41-214ENST00000512334 KIAA1683Q9H0B3 1180 aa18.96■□□□□ 0.63
DDX41-214ENST00000512334 ARHGEF10LQ9HCE6 1279 aa18.96■□□□□ 0.63
DDX41-214ENST00000512334 CCDC171Q6TFL3 1326 aa18.96■□□□□ 0.63
DDX41-214ENST00000512334 FOXP2O15409 715 aa18.95■□□□□ 0.62
DDX41-214ENST00000512334 PRDM1O75626 825 aa18.95■□□□□ 0.62
DDX41-214ENST00000512334 CENPBP07199 599 aaPredicted RBP18.95■□□□□ 0.62
DDX41-214ENST00000512334 BCRP11274 1271 aa18.95■□□□□ 0.62
DDX41-214ENST00000512334 MFAP1P55081 439 aaKnown RBP18.95■□□□□ 0.62
DDX41-214ENST00000512334 CAP1Q01518 475 aa18.95■□□□□ 0.62
DDX41-214ENST00000512334 ATP2B2Q01814 1243 aa18.95■□□□□ 0.62
DDX41-214ENST00000512334 FBXO46Q6PJ61 603 aaPredicted RBP18.95■□□□□ 0.62
DDX41-214ENST00000512334 ZNF444Q8N0Y2 327 aaPredicted RBP18.95■□□□□ 0.62
DDX41-214ENST00000512334 ANKRD13CQ8N6S4 541 aa18.95■□□□□ 0.62
DDX41-214ENST00000512334 A0A1W2PRG0 241 aa18.94■□□□□ 0.62
DDX41-214ENST00000512334 CCDC85CA6NKD9 419 aa18.94■□□□□ 0.62
DDX41-214ENST00000512334 RASA1P20936 1047 aa18.94■□□□□ 0.62
DDX41-214ENST00000512334 HOXA7P31268 230 aaPredicted RBP18.94■□□□□ 0.62
DDX41-214ENST00000512334 PDE4BQ07343 736 aa18.94■□□□□ 0.62
DDX41-214ENST00000512334 C12orf42Q96LP6 360 aa18.94■□□□□ 0.62
DDX41-214ENST00000512334 ZSWIM8A7E2V4 1837 aa18.93■□□□□ 0.62
DDX41-214ENST00000512334 FMNL1O95466 1100 aaPredicted RBP18.93■□□□□ 0.62
DDX41-214ENST00000512334 HSPD1P10809 573 aaKnown RBP18.93■□□□□ 0.62
DDX41-214ENST00000512334 VCAM1P19320 739 aa18.93■□□□□ 0.62
DDX41-214ENST00000512334 PSMC4P43686 418 aa18.93■□□□□ 0.62
DDX41-214ENST00000512334 CTDSPL2Q05D32 466 aa18.93■□□□□ 0.62
DDX41-214ENST00000512334 CCDC136Q96JN2 1154 aa18.93■□□□□ 0.62
DDX41-214ENST00000512334 SH2D4AQ9H788 454 aa18.93■□□□□ 0.62
DDX41-214ENST00000512334 KANSL2Q9H9L4 492 aa18.93■□□□□ 0.62
DDX41-214ENST00000512334 HPS5Q9UPZ3 1129 aa18.93■□□□□ 0.62
DDX41-214ENST00000512334 USP17L15C9J2P7 530 aa18.92■□□□□ 0.62
DDX41-214ENST00000512334 USP17L13C9JLJ4 530 aa18.92■□□□□ 0.62
DDX41-214ENST00000512334 USP17L11C9JVI0 530 aa18.92■□□□□ 0.62
DDX41-214ENST00000512334 USP17L18D6R9N7 530 aa18.92■□□□□ 0.62
DDX41-214ENST00000512334 USP17L22D6RA61 530 aa18.92■□□□□ 0.62
DDX41-214ENST00000512334 USP17L17D6RBQ6 530 aa18.92■□□□□ 0.62
DDX41-214ENST00000512334 USP17L19D6RCP7 530 aa18.92■□□□□ 0.62
DDX41-214ENST00000512334 USP17L20D6RJB6 530 aa18.92■□□□□ 0.62
DDX41-214ENST00000512334 EEF2P13639 858 aaKnown RBP18.92■□□□□ 0.62
DDX41-214ENST00000512334 GCLCP48506 637 aaPredicted RBP18.92■□□□□ 0.62
DDX41-214ENST00000512334 USP17L24Q0WX57 530 aa18.92■□□□□ 0.62
DDX41-214ENST00000512334 ALX1Q15699 326 aa18.92■□□□□ 0.62
DDX41-214ENST00000512334 P2RX7Q99572 595 aaKnown RBP18.92■□□□□ 0.62
DDX41-214ENST00000512334 PTPN22Q9Y2R2 807 aa18.92■□□□□ 0.62
DDX41-214ENST00000512334 FGAP02671 866 aa18.91■□□□□ 0.62
DDX41-214ENST00000512334 FCGRTP55899 365 aa18.91■□□□□ 0.62
DDX41-214ENST00000512334 HERVK_113P62684 666 aa18.91■□□□□ 0.62
DDX41-214ENST00000512334 FAM110CQ1W6H9 321 aa18.91■□□□□ 0.62
DDX41-214ENST00000512334 RPAP3Q9H6T3 665 aaPredicted RBP18.91■□□□□ 0.62
DDX41-214ENST00000512334 RAD21O60216 631 aa18.9■□□□□ 0.62
DDX41-214ENST00000512334 GNRH1P01148 92 aa18.9■□□□□ 0.62
DDX41-214ENST00000512334 TSPY3P0CV98 308 aa18.9■□□□□ 0.62
DDX41-214ENST00000512334 TSPY8P0CW00 308 aa18.9■□□□□ 0.62
DDX41-214ENST00000512334 CTGFP29279 349 aa18.9■□□□□ 0.62
DDX41-214ENST00000512334 SIAH1Q8IUQ4 282 aa18.9■□□□□ 0.62
DDX41-214ENST00000512334 SPICE1Q8N0Z3 855 aa18.9■□□□□ 0.62
DDX41-214ENST00000512334 TRIM47Q96LD4 638 aa18.9■□□□□ 0.62
DDX41-214ENST00000512334 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.9■□□□□ 0.62
DDX41-214ENST00000512334 VCPKMTQ9H867 229 aa18.9■□□□□ 0.62
DDX41-214ENST00000512334 TMX2Q9Y320 296 aa18.9■□□□□ 0.62
DDX41-214ENST00000512334 HOXD10P28358 340 aa18.89■□□□□ 0.61
DDX41-214ENST00000512334 FAM47AQ5JRC9 791 aa18.89■□□□□ 0.61
DDX41-214ENST00000512334 CATSPERGQ6ZRH7 1159 aa18.89■□□□□ 0.61
DDX41-214ENST00000512334 GTF3C2Q8WUA4 911 aaPredicted RBP18.89■□□□□ 0.61
DDX41-214ENST00000512334 LPAR1Q92633 364 aa18.89■□□□□ 0.61
DDX41-214ENST00000512334 PAGR1Q9BTK6 254 aa18.89■□□□□ 0.61
DDX41-214ENST00000512334 TANGO6Q9C0B7 1094 aa18.89■□□□□ 0.61
DDX41-214ENST00000512334 TOMM22Q9NS69 142 aa18.89■□□□□ 0.61
DDX41-214ENST00000512334 ANAPC4Q9UJX5 808 aa18.89■□□□□ 0.61
DDX41-214ENST00000512334 GREB1LQ9C091 1923 aaPredicted RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms