RNA–Protein interactions for RNA: ENST00000511303.5

SGCA-207, Transcript of sarcoglycan alpha, humanhuman

TSL 3

Gene SGCA, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-207ENST00000511303 DDNO94850 711 aaPredicted RBP13.9□□□□□ -0.18
SGCA-207ENST00000511303 CTDNEP1O95476 244 aa13.9□□□□□ -0.18
SGCA-207ENST00000511303 BRD1O95696 1058 aa13.9□□□□□ -0.18
SGCA-207ENST00000511303 TTLL1O95922 423 aa13.9□□□□□ -0.18
SGCA-207ENST00000511303 SYT1P21579 422 aa13.9□□□□□ -0.18
SGCA-207ENST00000511303 SMARCA1P28370 1054 aa13.9□□□□□ -0.18
SGCA-207ENST00000511303 NTRK3Q16288 839 aa13.9□□□□□ -0.18
SGCA-207ENST00000511303 TMEM179Q6ZVK1 233 aa13.9□□□□□ -0.18
SGCA-207ENST00000511303 MICU3Q86XE3 530 aa13.9□□□□□ -0.18
SGCA-207ENST00000511303 PNMA1Q8ND90 353 aa13.9□□□□□ -0.18
SGCA-207ENST00000511303 ZC3H15Q8WU90 426 aaKnown RBP13.9□□□□□ -0.18
SGCA-207ENST00000511303 WASF1Q92558 559 aa13.9□□□□□ -0.18
SGCA-207ENST00000511303 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.9□□□□□ -0.18
SGCA-207ENST00000511303 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.9□□□□□ -0.18
SGCA-207ENST00000511303 NCOA5Q9HCD5 579 aaKnown RBP13.9□□□□□ -0.18
SGCA-207ENST00000511303 CABP5Q9NP86 173 aa13.9□□□□□ -0.18
SGCA-207ENST00000511303 FAM217BQ9NTX9 383 aaPredicted RBP13.9□□□□□ -0.18
SGCA-207ENST00000511303 NYAP2Q9P242 653 aa13.9□□□□□ -0.18
SGCA-207ENST00000511303 HACL1Q9UJ83 578 aa13.9□□□□□ -0.18
SGCA-207ENST00000511303 LAMB1P07942 1786 aa13.9□□□□□ -0.18
SGCA-207ENST00000511303 GOLGB1Q14789 3259 aaKnown RBP13.9□□□□□ -0.18
SGCA-207ENST00000511303 SHTN1A0MZ66 631 aa13.89□□□□□ -0.19
SGCA-207ENST00000511303 PTPDC1A2A3K4 754 aa13.89□□□□□ -0.19
SGCA-207ENST00000511303 GLTPD2A6NH11 291 aa13.89□□□□□ -0.19
SGCA-207ENST00000511303 STX6O43752 255 aa13.89□□□□□ -0.19
SGCA-207ENST00000511303 AKR1B1P15121 316 aa13.89□□□□□ -0.19
SGCA-207ENST00000511303 ADD1P35611 737 aaKnown RBP13.89□□□□□ -0.19
SGCA-207ENST00000511303 EPS15P42566 896 aa13.89□□□□□ -0.19
SGCA-207ENST00000511303 USP50Q70EL3 339 aaPredicted RBP13.89□□□□□ -0.19
SGCA-207ENST00000511303 CTCFLQ8NI51 663 aaPredicted RBP13.89□□□□□ -0.19
SGCA-207ENST00000511303 CEP95Q96GE4 821 aa13.89□□□□□ -0.19
SGCA-207ENST00000511303 TMEM47Q9BQJ4 181 aa13.89□□□□□ -0.19
SGCA-207ENST00000511303 DEFB129Q9H1M3 183 aa13.89□□□□□ -0.19
SGCA-207ENST00000511303 DNAJC18Q9H819 358 aa13.89□□□□□ -0.19
SGCA-207ENST00000511303 RBM27Q9P2N5 1060 aaKnown RBP13.89□□□□□ -0.19
SGCA-207ENST00000511303 STX8Q9UNK0 236 aa13.89□□□□□ -0.19
SGCA-207ENST00000511303 ATP6V1DQ9Y5K8 247 aa13.89□□□□□ -0.19
SGCA-207ENST00000511303 MYH1P12882 1939 aa13.89□□□□□ -0.19
SGCA-207ENST00000511303 CDK5RAP2Q96SN8 1893 aa13.89□□□□□ -0.19
SGCA-207ENST00000511303 STK36Q9NRP7 1315 aa13.89□□□□□ -0.19
SGCA-207ENST00000511303 NMT2O60551 498 aa13.88□□□□□ -0.19
SGCA-207ENST00000511303 EGFRP00533 1210 aa13.88□□□□□ -0.19
SGCA-207ENST00000511303 CDC27P30260 824 aa13.88□□□□□ -0.19
SGCA-207ENST00000511303 SSRP1Q08945 709 aaKnown RBP13.88□□□□□ -0.19
SGCA-207ENST00000511303 ABCB5Q2M3G0 1257 aa13.88□□□□□ -0.19
SGCA-207ENST00000511303 TRIM22Q8IYM9 498 aa13.88□□□□□ -0.19
SGCA-207ENST00000511303 TEPSINQ96N21 525 aa13.88□□□□□ -0.19
SGCA-207ENST00000511303 TMEM39BQ9GZU3 492 aa13.88□□□□□ -0.19
SGCA-207ENST00000511303 ORC3Q9UBD5 711 aaPredicted RBP13.88□□□□□ -0.19
SGCA-207ENST00000511303 ECM29Q5VYK3 1845 aa13.87□□□□□ -0.19
SGCA-207ENST00000511303 SBF1O95248 1867 aa13.87□□□□□ -0.19
SGCA-207ENST00000511303 IQCA1LA6NCM1 817 aa13.87□□□□□ -0.19
SGCA-207ENST00000511303 DCAF8L1A6NGE4 600 aa13.87□□□□□ -0.19
SGCA-207ENST00000511303 FMNL1O95466 1100 aaPredicted RBP13.87□□□□□ -0.19
SGCA-207ENST00000511303 ZSCAN22P10073 491 aaPredicted RBP13.87□□□□□ -0.19
SGCA-207ENST00000511303 SUPT20HL1Q3ZLR7 823 aa13.87□□□□□ -0.19
SGCA-207ENST00000511303 DCAF15Q66K64 600 aa13.87□□□□□ -0.19
SGCA-207ENST00000511303 FAM177A1Q8N128 213 aaPredicted RBP13.87□□□□□ -0.19
SGCA-207ENST00000511303 NUP133Q8WUM0 1156 aa13.87□□□□□ -0.19
SGCA-207ENST00000511303 GBP4Q96PP9 640 aa13.87□□□□□ -0.19
SGCA-207ENST00000511303 RNF26Q9BY78 433 aaPredicted RBP13.87□□□□□ -0.19
SGCA-207ENST00000511303 MPHOSPH10O00566 681 aaKnown RBP13.86□□□□□ -0.19
SGCA-207ENST00000511303 PRPF3O43395 683 aaKnown RBP13.86□□□□□ -0.19
SGCA-207ENST00000511303 JAK2O60674 1132 aa13.86□□□□□ -0.19
SGCA-207ENST00000511303 DEXIO95424 95 aa13.86□□□□□ -0.19
SGCA-207ENST00000511303 FDPSP14324 419 aaKnown RBP13.86□□□□□ -0.19
SGCA-207ENST00000511303 HIRAP54198 1017 aaPredicted RBP13.86□□□□□ -0.19
SGCA-207ENST00000511303 AKAP17AQ02040 695 aaKnown RBP13.86□□□□□ -0.19
SGCA-207ENST00000511303 GRM4Q14833 912 aa13.86□□□□□ -0.19
SGCA-207ENST00000511303 ANGEL2Q5VTE6 544 aaKnown RBP13.86□□□□□ -0.19
SGCA-207ENST00000511303 TRPM4Q8TD43 1214 aa13.86□□□□□ -0.19
SGCA-207ENST00000511303 CLIP2Q9UDT6 1046 aa13.86□□□□□ -0.19
SGCA-207ENST00000511303 MTMR6Q9Y217 621 aa13.86□□□□□ -0.19
SGCA-207ENST00000511303 ZDHHC9Q9Y397 364 aa13.86□□□□□ -0.19
SGCA-207ENST00000511303 PALM3A6NDB9 673 aaPredicted RBP13.85□□□□□ -0.19
SGCA-207ENST00000511303 H3BQV1 296 aa13.85□□□□□ -0.19
SGCA-207ENST00000511303 CTNND1O60716 968 aaKnown RBP13.85□□□□□ -0.19
SGCA-207ENST00000511303 ASNSP08243 561 aa13.85□□□□□ -0.19
SGCA-207ENST00000511303 SNHG28P0DPA3 235 aa13.85□□□□□ -0.19
SGCA-207ENST00000511303 PTMSP20962 102 aa13.85□□□□□ -0.19
SGCA-207ENST00000511303 CAP2P40123 477 aa13.85□□□□□ -0.19
SGCA-207ENST00000511303 FUT2Q10981 343 aa13.85□□□□□ -0.19
SGCA-207ENST00000511303 ASPRV1Q53RT3 343 aa13.85□□□□□ -0.19
SGCA-207ENST00000511303 IFFO2Q5TF58 517 aa13.85□□□□□ -0.19
SGCA-207ENST00000511303 TMTC3Q6ZXV5 915 aa13.85□□□□□ -0.19
SGCA-207ENST00000511303 PNMA8AQ86V59 439 aaPredicted RBP13.85□□□□□ -0.19
SGCA-207ENST00000511303 TNPO1Q92973 898 aaKnown RBP13.85□□□□□ -0.19
SGCA-207ENST00000511303 DCPSQ96C86 337 aaKnown RBP13.85□□□□□ -0.19
SGCA-207ENST00000511303 DDX11Q96FC9 970 aa13.85□□□□□ -0.19
SGCA-207ENST00000511303 MYL10Q9BUA6 226 aa13.85□□□□□ -0.19
SGCA-207ENST00000511303 ZSCAN16Q9H4T2 348 aaPredicted RBP13.85□□□□□ -0.19
SGCA-207ENST00000511303 ADAMTSL1Q8N6G6 1762 aa13.85□□□□□ -0.19
SGCA-207ENST00000511303 PHF20L1A8MW92 1017 aa13.84□□□□□ -0.19
SGCA-207ENST00000511303 PARP1P09874 1014 aaKnown RBP13.84□□□□□ -0.19
SGCA-207ENST00000511303 XBP1P17861 261 aa13.84□□□□□ -0.19
SGCA-207ENST00000511303 RXRAP19793 462 aa13.84□□□□□ -0.19
SGCA-207ENST00000511303 GPATCH4Q5T3I0 446 aaKnown RBP13.84□□□□□ -0.19
SGCA-207ENST00000511303 NBPF11Q86T75 865 aa13.84□□□□□ -0.19
SGCA-207ENST00000511303 CCDC144CPQ8IYA2 1237 aa13.84□□□□□ -0.19
SGCA-207ENST00000511303 FBXO18Q8NFZ0 1043 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms