RNA–Protein interactions for RNA: ENST00000511092.5

CLCN3-207, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-207ENST00000511092 WASF2Q9Y6W5 498 aa8.29□□□□□ -1.08
CLCN3-207ENST00000511092 TENM4Q6N022 2769 aa8.28□□□□□ -1.08
CLCN3-207ENST00000511092 SIPA1L3O60292 1781 aaPredicted RBP8.28□□□□□ -1.08
CLCN3-207ENST00000511092 SMG1Q96Q15 3661 aaKnown RBP8.28□□□□□ -1.08
CLCN3-207ENST00000511092 RFXAPO00287 272 aa8.28□□□□□ -1.08
CLCN3-207ENST00000511092 CLEC4GQ6UXB4 293 aa8.28□□□□□ -1.08
CLCN3-207ENST00000511092 CCDC129Q6ZRS4 1044 aa8.28□□□□□ -1.08
CLCN3-207ENST00000511092 LRRN4Q8WUT4 740 aa8.28□□□□□ -1.08
CLCN3-207ENST00000511092 FOXJ1Q92949 421 aa8.28□□□□□ -1.08
CLCN3-207ENST00000511092 MXD3Q9BW11 206 aa8.28□□□□□ -1.08
CLCN3-207ENST00000511092 LGR6Q9HBX8 967 aa8.28□□□□□ -1.08
CLCN3-207ENST00000511092 ATP11BQ9Y2G3 1177 aa8.28□□□□□ -1.08
CLCN3-207ENST00000511092 TRIM43BA6NCK2 446 aa8.27□□□□□ -1.09
CLCN3-207ENST00000511092 PPP1R12BO60237 982 aaPredicted RBP8.27□□□□□ -1.09
CLCN3-207ENST00000511092 PRKCSHP14314 528 aaPredicted RBP8.27□□□□□ -1.09
CLCN3-207ENST00000511092 IRF5Q13568 498 aa8.27□□□□□ -1.09
CLCN3-207ENST00000511092 PUM1Q14671 1186 aaKnown RBP eCLIP8.27□□□□□ -1.09
CLCN3-207ENST00000511092 LCE2AQ5TA79 106 aaPredicted RBP8.27□□□□□ -1.09
CLCN3-207ENST00000511092 NBPF12Q5TAG4 269 aaPredicted RBP8.27□□□□□ -1.09
CLCN3-207ENST00000511092 BPHLQ86WA6 291 aaPredicted RBP8.27□□□□□ -1.09
CLCN3-207ENST00000511092 ANKRD13AQ8IZ07 590 aa8.27□□□□□ -1.09
CLCN3-207ENST00000511092 AGBL3Q8NEM8 1001 aa8.27□□□□□ -1.09
CLCN3-207ENST00000511092 TRIM43Q96BQ3 446 aaPredicted RBP8.27□□□□□ -1.09
CLCN3-207ENST00000511092 SENP6Q9GZR1 1112 aaPredicted RBP8.27□□□□□ -1.09
CLCN3-207ENST00000511092 HMX1Q9NP08 348 aaPredicted RBP8.27□□□□□ -1.09
CLCN3-207ENST00000511092 POLLQ9UGP5 575 aa8.27□□□□□ -1.09
CLCN3-207ENST00000511092 ZNF652Q9Y2D9 606 aa8.27□□□□□ -1.09
CLCN3-207ENST00000511092 MTCH2Q9Y6C9 303 aa8.27□□□□□ -1.09
CLCN3-207ENST00000511092 PPM1GO15355 546 aaPredicted RBP8.26□□□□□ -1.09
CLCN3-207ENST00000511092 RFC5P40937 340 aa8.26□□□□□ -1.09
CLCN3-207ENST00000511092 COL9A3Q14050 684 aaPredicted RBP8.26□□□□□ -1.09
CLCN3-207ENST00000511092 C1orf141Q5JVX7 400 aa8.26□□□□□ -1.09
CLCN3-207ENST00000511092 APOBEC3FQ8IUX4 373 aaKnown RBP8.26□□□□□ -1.09
CLCN3-207ENST00000511092 FAM174AQ8TBP5 190 aa8.26□□□□□ -1.09
CLCN3-207ENST00000511092 PRRX2Q99811 253 aa8.26□□□□□ -1.09
CLCN3-207ENST00000511092 DEFB129Q9H1M3 183 aa8.26□□□□□ -1.09
CLCN3-207ENST00000511092 SENP2Q9HC62 589 aa8.26□□□□□ -1.09
CLCN3-207ENST00000511092 PDLIM7Q9NR12 457 aa8.26□□□□□ -1.09
CLCN3-207ENST00000511092 YBX2Q9Y2T7 364 aaKnown RBP8.26□□□□□ -1.09
CLCN3-207ENST00000511092 CEP295Q9C0D2 2601 aa8.26□□□□□ -1.09
CLCN3-207ENST00000511092 ARAP2Q8WZ64 1704 aa8.26□□□□□ -1.09
CLCN3-207ENST00000511092 LOC400499M0QZD8 3231 aa8.25□□□□□ -1.09
CLCN3-207ENST00000511092 WDHD1O75717 1129 aaPredicted RBP8.25□□□□□ -1.09
CLCN3-207ENST00000511092 BCRP11274 1271 aa8.25□□□□□ -1.09
CLCN3-207ENST00000511092 IREB2P48200 963 aaKnown RBP8.25□□□□□ -1.09
CLCN3-207ENST00000511092 PLEKHO1Q53GL0 409 aaPredicted RBP8.25□□□□□ -1.09
CLCN3-207ENST00000511092 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.25□□□□□ -1.09
CLCN3-207ENST00000511092 FRMD5Q7Z6J6 570 aa8.25□□□□□ -1.09
CLCN3-207ENST00000511092 CRACR2BQ8N4Y2 399 aaPredicted RBP8.25□□□□□ -1.09
CLCN3-207ENST00000511092 UBN2Q6ZU65 1347 aa8.25□□□□□ -1.09
CLCN3-207ENST00000511092 HEG1Q9ULI3 1381 aa8.24□□□□□ -1.09
CLCN3-207ENST00000511092 IGF2RP11717 2491 aa8.24□□□□□ -1.09
CLCN3-207ENST00000511092 HMGCRP04035 888 aa8.24□□□□□ -1.09
CLCN3-207ENST00000511092 NBL1P41271 181 aa8.24□□□□□ -1.09
CLCN3-207ENST00000511092 VGLL4Q14135 290 aa8.24□□□□□ -1.09
CLCN3-207ENST00000511092 ARID5BQ14865 1188 aa8.24□□□□□ -1.09
CLCN3-207ENST00000511092 NR6A1Q15406 480 aa8.24□□□□□ -1.09
CLCN3-207ENST00000511092 CDCA8Q53HL2 280 aa8.24□□□□□ -1.09
CLCN3-207ENST00000511092 TREML4Q6UXN2 200 aa8.24□□□□□ -1.09
CLCN3-207ENST00000511092 KIAA2013Q8IYS2 634 aa8.24□□□□□ -1.09
CLCN3-207ENST00000511092 KIFC2Q96AC6 838 aa8.24□□□□□ -1.09
CLCN3-207ENST00000511092 ZCCHC17Q9NP64 241 aaKnown RBP8.24□□□□□ -1.09
CLCN3-207ENST00000511092 BSDC1Q9NW68 430 aaPredicted RBP8.24□□□□□ -1.09
CLCN3-207ENST00000511092 DLL3Q9NYJ7 618 aa8.24□□□□□ -1.09
CLCN3-207ENST00000511092 MUTYHQ9UIF7 546 aa8.24□□□□□ -1.09
CLCN3-207ENST00000511092 GAKO14976 1311 aa8.24□□□□□ -1.09
CLCN3-207ENST00000511092 ABCA12Q86UK0 2595 aa8.23□□□□□ -1.09
CLCN3-207ENST00000511092 EPOPA6NHQ4 379 aa8.23□□□□□ -1.09
CLCN3-207ENST00000511092 UNCXA6NJT0 531 aa8.23□□□□□ -1.09
CLCN3-207ENST00000511092 PBXIP1Q96AQ6 731 aa8.23□□□□□ -1.09
CLCN3-207ENST00000511092 CARD14Q9BXL6 1004 aa8.23□□□□□ -1.09
CLCN3-207ENST00000511092 DAGLAQ9Y4D2 1042 aa8.23□□□□□ -1.09
CLCN3-207ENST00000511092 AOX1Q06278 1338 aa8.23□□□□□ -1.09
CLCN3-207ENST00000511092 ITPR1Q14643 2758 aa8.22□□□□□ -1.09
CLCN3-207ENST00000511092 DSPP15924 2871 aaKnown RBP8.22□□□□□ -1.09
CLCN3-207ENST00000511092 OTOGLQ3ZCN5 2332 aa8.22□□□□□ -1.09
CLCN3-207ENST00000511092 MAGEB6P1A0A0J9YX57 407 aa8.22□□□□□ -1.09
CLCN3-207ENST00000511092 PDHXO00330 501 aa8.22□□□□□ -1.09
CLCN3-207ENST00000511092 TNPO2O14787 897 aaKnown RBP8.22□□□□□ -1.09
CLCN3-207ENST00000511092 ADRB1P08588 477 aa8.22□□□□□ -1.09
CLCN3-207ENST00000511092 CETPP11597 493 aa8.22□□□□□ -1.09
CLCN3-207ENST00000511092 GPTP24298 496 aa8.22□□□□□ -1.09
CLCN3-207ENST00000511092 GPSM2P81274 684 aa8.22□□□□□ -1.09
CLCN3-207ENST00000511092 TRIM60Q495X7 471 aa8.22□□□□□ -1.09
CLCN3-207ENST00000511092 TMEM259Q4ZIN3 620 aa8.22□□□□□ -1.09
CLCN3-207ENST00000511092 C4orf48Q5BLP8 95 aa8.22□□□□□ -1.09
CLCN3-207ENST00000511092 NPM2Q86SE8 214 aaKnown RBP8.22□□□□□ -1.09
CLCN3-207ENST00000511092 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.22□□□□□ -1.09
CLCN3-207ENST00000511092 GPKOWQ92917 476 aaPredicted RBP eCLIP8.22□□□□□ -1.09
CLCN3-207ENST00000511092 NYXQ9GZU5 481 aa8.22□□□□□ -1.09
CLCN3-207ENST00000511092 FKBPLQ9UIM3 349 aa8.22□□□□□ -1.09
CLCN3-207ENST00000511092 ITPR3Q14573 2671 aa8.22□□□□□ -1.09
CLCN3-207ENST00000511092 PHIPQ8WWQ0 1821 aa8.22□□□□□ -1.09
CLCN3-207ENST00000511092 TMEM221A6NGB7 291 aa8.21□□□□□ -1.1
CLCN3-207ENST00000511092 M0R296 226 aa8.21□□□□□ -1.1
CLCN3-207ENST00000511092 CYP2C8P10632 490 aa8.21□□□□□ -1.1
CLCN3-207ENST00000511092 EIF4A2Q14240 407 aaKnown RBP8.21□□□□□ -1.1
CLCN3-207ENST00000511092 SUSD4Q5VX71 490 aa8.21□□□□□ -1.1
CLCN3-207ENST00000511092 NBPF10Q6P3W6 841 aaKnown RBP8.21□□□□□ -1.1
CLCN3-207ENST00000511092 AEBP1Q8IUX7 1158 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms