RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 COG5Q9UP83 839 aa13.56□□□□□ -0.24
SNF8-207ENST00000509995 TIMP1P01033 207 aa13.55□□□□□ -0.24
SNF8-207ENST00000509995 FGFR2P21802 821 aa13.55□□□□□ -0.24
SNF8-207ENST00000509995 FAAP100Q0VG06 881 aa13.55□□□□□ -0.24
SNF8-207ENST00000509995 PPIGQ13427 754 aaKnown RBP eCLIP13.55□□□□□ -0.243e-7■■□□□ 12
SNF8-207ENST00000509995 FBXL18Q96ME1 805 aa13.55□□□□□ -0.24
SNF8-207ENST00000509995 KCNH6Q9H252 994 aa13.55□□□□□ -0.24
SNF8-207ENST00000509995 YBX2Q9Y2T7 364 aaKnown RBP13.55□□□□□ -0.24
SNF8-207ENST00000509995 IVNS1ABPQ9Y6Y0 642 aa13.55□□□□□ -0.24
SNF8-207ENST00000509995 SALL1Q9NSC2 1324 aa13.55□□□□□ -0.24
SNF8-207ENST00000509995 SIPA1L1O43166 1804 aa13.55□□□□□ -0.24
SNF8-207ENST00000509995 A0A0G2JMZ2 1700 aa13.54□□□□□ -0.24
SNF8-207ENST00000509995 CNMDO75829 334 aa13.54□□□□□ -0.24
SNF8-207ENST00000509995 NCBP3Q53F19 620 aaKnown RBP13.54□□□□□ -0.24
SNF8-207ENST00000509995 OLFML2BQ68BL8 750 aa13.54□□□□□ -0.24
SNF8-207ENST00000509995 MFSD5Q6N075 450 aa13.54□□□□□ -0.24
SNF8-207ENST00000509995 PSRC1Q6PGN9 363 aaPredicted RBP13.54□□□□□ -0.24
SNF8-207ENST00000509995 ANKRD33Q7Z3H0 272 aa13.54□□□□□ -0.24
SNF8-207ENST00000509995 CD320Q9NPF0 282 aa13.54□□□□□ -0.24
SNF8-207ENST00000509995 RABGAP1Q9Y3P9 1069 aa13.54□□□□□ -0.24
SNF8-207ENST00000509995 A0A1W2PQ45 241 aaPredicted RBP13.53□□□□□ -0.24
SNF8-207ENST00000509995 A0A1W2PQY0 241 aa13.53□□□□□ -0.24
SNF8-207ENST00000509995 C19orf81C9J6K1 198 aa13.53□□□□□ -0.24
SNF8-207ENST00000509995 F6X3S4 739 aa13.53□□□□□ -0.24
SNF8-207ENST00000509995 FOXK2Q01167 660 aa13.53□□□□□ -0.24
SNF8-207ENST00000509995 WDR43Q15061 677 aaKnown RBP eCLIP13.53□□□□□ -0.24
SNF8-207ENST00000509995 TWISTNBQ3B726 338 aaPredicted RBP13.53□□□□□ -0.24
SNF8-207ENST00000509995 TOX2Q96NM4 488 aa13.53□□□□□ -0.24
SNF8-207ENST00000509995 UIMC1Q96RL1 719 aa13.53□□□□□ -0.24
SNF8-207ENST00000509995 TBX21Q9UL17 535 aa13.53□□□□□ -0.24
SNF8-207ENST00000509995 DCDC2CA8MYV0 355 aa13.52□□□□□ -0.25
SNF8-207ENST00000509995 USP17L10C9JJH3 530 aa13.52□□□□□ -0.25
SNF8-207ENST00000509995 BTDP43251 543 aa13.52□□□□□ -0.25
SNF8-207ENST00000509995 PPP2R2DQ66LE6 453 aa13.52□□□□□ -0.25
SNF8-207ENST00000509995 ZNF365Q70YC5 407 aa13.52□□□□□ -0.25
SNF8-207ENST00000509995 TSR2Q969E8 191 aaKnown RBP13.52□□□□□ -0.25
SNF8-207ENST00000509995 KAZALD1Q96I82 304 aa13.52□□□□□ -0.25
SNF8-207ENST00000509995 SUCLG2Q96I99 432 aa13.52□□□□□ -0.25
SNF8-207ENST00000509995 C9orf78Q9NZ63 289 aaPredicted RBP13.52□□□□□ -0.25
SNF8-207ENST00000509995 ZNF521Q96K83 1311 aa13.52□□□□□ -0.25
SNF8-207ENST00000509995 MYO15AQ9UKN7 3530 aa13.51□□□□□ -0.25
SNF8-207ENST00000509995 NPM3O75607 178 aaKnown RBP13.51□□□□□ -0.25
SNF8-207ENST00000509995 ASNSP08243 561 aa13.51□□□□□ -0.25
SNF8-207ENST00000509995 SLC5A1P13866 664 aa13.51□□□□□ -0.25
SNF8-207ENST00000509995 CSF2RAP15509 400 aa13.51□□□□□ -0.25
SNF8-207ENST00000509995 XPNPEP3Q9NQH7 507 aa13.51□□□□□ -0.25
SNF8-207ENST00000509995 ADAMTS8Q9UP79 889 aa13.51□□□□□ -0.25
SNF8-207ENST00000509995 MTCH2Q9Y6C9 303 aa13.51□□□□□ -0.25
SNF8-207ENST00000509995 SPTBN4Q9H254 2564 aa13.51□□□□□ -0.25
SNF8-207ENST00000509995 DCHS1Q96JQ0 3298 aa13.5□□□□□ -0.25
SNF8-207ENST00000509995 GTPBP6O43824 516 aaPredicted RBP13.5□□□□□ -0.25
SNF8-207ENST00000509995 ST18O60284 1047 aa13.5□□□□□ -0.25
SNF8-207ENST00000509995 ACRP10323 421 aa13.5□□□□□ -0.25
SNF8-207ENST00000509995 POU3F3P20264 500 aaPredicted RBP13.5□□□□□ -0.25
SNF8-207ENST00000509995 RHBDL3P58872 404 aa13.5□□□□□ -0.25
SNF8-207ENST00000509995 CSPP1Q1MSJ5 1256 aa13.5□□□□□ -0.25
SNF8-207ENST00000509995 RNF180Q86T96 592 aa13.5□□□□□ -0.25
SNF8-207ENST00000509995 DPP9Q86TI2 863 aa13.5□□□□□ -0.25
SNF8-207ENST00000509995 DZIP1Q86YF9 867 aaKnown RBP13.5□□□□□ -0.25
SNF8-207ENST00000509995 LPIN2Q92539 896 aa13.5□□□□□ -0.25
SNF8-207ENST00000509995 HLA-CQ95604 372 aa13.5□□□□□ -0.25
SNF8-207ENST00000509995 HERC5Q9UII4 1024 aaKnown RBP13.5□□□□□ -0.25
SNF8-207ENST00000509995 MROH7-TTC4A0A0A0MT08 1334 aa13.49□□□□□ -0.25
SNF8-207ENST00000509995 RARBP10826 455 aa13.49□□□□□ -0.25
SNF8-207ENST00000509995 ADORA2AP29274 412 aa13.49□□□□□ -0.25
SNF8-207ENST00000509995 RABL6Q3YEC7 729 aaPredicted RBP13.49□□□□□ -0.25
SNF8-207ENST00000509995 PRAMEF19Q5SWL8 479 aa13.49□□□□□ -0.25
SNF8-207ENST00000509995 SLF2Q8IX21 1173 aa13.49□□□□□ -0.25
SNF8-207ENST00000509995 TMEM199Q8N511 208 aa13.49□□□□□ -0.25
SNF8-207ENST00000509995 ZGPATQ8N5A5 531 aaKnown RBP13.49□□□□□ -0.25
SNF8-207ENST00000509995 FAM163AQ96GL9 167 aaPredicted RBP13.49□□□□□ -0.25
SNF8-207ENST00000509995 MTIF3Q9H2K0 278 aaKnown RBP13.49□□□□□ -0.25
SNF8-207ENST00000509995 EMILIN3Q9NT22 766 aa13.49□□□□□ -0.25
SNF8-207ENST00000509995 TRIOO75962 3097 aa13.48□□□□□ -0.25
SNF8-207ENST00000509995 ROBO3Q96MS0 1386 aa13.48□□□□□ -0.25
SNF8-207ENST00000509995 APBB1O00213 710 aa13.48□□□□□ -0.25
SNF8-207ENST00000509995 APAF1O14727 1248 aa13.48□□□□□ -0.25
SNF8-207ENST00000509995 PGK1P00558 417 aa13.48□□□□□ -0.25
SNF8-207ENST00000509995 JAG1P78504 1218 aa13.48□□□□□ -0.25
SNF8-207ENST00000509995 RALBP1Q15311 655 aa13.48□□□□□ -0.25
SNF8-207ENST00000509995 KLHDC4Q8TBB5 520 aa13.48□□□□□ -0.25
SNF8-207ENST00000509995 BICC1Q9H694 974 aaKnown RBP13.48□□□□□ -0.25
SNF8-207ENST00000509995 STARD7Q9NQZ5 370 aa13.48□□□□□ -0.25
SNF8-207ENST00000509995 GNL3LQ9NVN8 582 aaKnown RBP13.48□□□□□ -0.25
SNF8-207ENST00000509995 BTBD7Q9P203 1132 aa13.48□□□□□ -0.25
SNF8-207ENST00000509995 DENND2AQ9ULE3 1009 aa13.48□□□□□ -0.25
SNF8-207ENST00000509995 MROH7Q68CQ1 1323 aa13.47□□□□□ -0.25
SNF8-207ENST00000509995 SEMA3EO15041 775 aa13.47□□□□□ -0.25
SNF8-207ENST00000509995 RABGGTBP53611 331 aa13.47□□□□□ -0.25
SNF8-207ENST00000509995 SHROOM1Q2M3G4 852 aaPredicted RBP13.47□□□□□ -0.25
SNF8-207ENST00000509995 USP17L2Q6R6M4 530 aa13.47□□□□□ -0.25
SNF8-207ENST00000509995 LBX2Q6XYB7 198 aa13.47□□□□□ -0.25
SNF8-207ENST00000509995 PHOX2BQ99453 314 aa13.47□□□□□ -0.25
SNF8-207ENST00000509995 GPR75-ASB3A0A0A6YYF3 556 aa13.46□□□□□ -0.25
SNF8-207ENST00000509995 USP17L15C9J2P7 530 aa13.46□□□□□ -0.25
SNF8-207ENST00000509995 USP17L13C9JLJ4 530 aa13.46□□□□□ -0.25
SNF8-207ENST00000509995 USP17L11C9JVI0 530 aa13.46□□□□□ -0.25
SNF8-207ENST00000509995 USP17L18D6R9N7 530 aa13.46□□□□□ -0.25
SNF8-207ENST00000509995 USP17L22D6RA61 530 aa13.46□□□□□ -0.25
SNF8-207ENST00000509995 USP17L17D6RBQ6 530 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms