RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 RELL1Q8IUW5 271 aa6.58□□□□□ -1.36
NEK1-204ENST00000509912 ZC3H12CQ9C0D7 883 aaKnown RBP6.58□□□□□ -1.36
NEK1-204ENST00000509912 BABAM1Q9NWV8 329 aa6.58□□□□□ -1.36
NEK1-204ENST00000509912 KHNYNO15037 678 aaKnown RBP6.57□□□□□ -1.36
NEK1-204ENST00000509912 HOXC9P31274 260 aa6.57□□□□□ -1.36
NEK1-204ENST00000509912 NFX1Q12986 1120 aaKnown RBP6.57□□□□□ -1.36
NEK1-204ENST00000509912 IER5Q5VY09 327 aa6.57□□□□□ -1.36
NEK1-204ENST00000509912 XKR5Q6UX68 686 aa6.57□□□□□ -1.36
NEK1-204ENST00000509912 SH3TC2Q8TF17 1288 aa6.57□□□□□ -1.36
NEK1-204ENST00000509912 BHMTQ93088 406 aa6.57□□□□□ -1.36
NEK1-204ENST00000509912 RHOVQ96L33 236 aa6.57□□□□□ -1.36
NEK1-204ENST00000509912 STK32BQ9NY57 414 aa6.57□□□□□ -1.36
NEK1-204ENST00000509912 ZDHHC3Q9NYG2 299 aa6.57□□□□□ -1.36
NEK1-204ENST00000509912 GPN3Q9UHW5 284 aaPredicted RBP6.57□□□□□ -1.36
NEK1-204ENST00000509912 DNMT3LQ9UJW3 386 aa6.57□□□□□ -1.36
NEK1-204ENST00000509912 CD2APQ9Y5K6 639 aa6.57□□□□□ -1.36
NEK1-204ENST00000509912 IGSF1Q8N6C5 1336 aa6.57□□□□□ -1.36
NEK1-204ENST00000509912 SCN7AQ01118 1682 aa6.57□□□□□ -1.36
NEK1-204ENST00000509912 ESYT3A0FGR9 886 aa6.57□□□□□ -1.36
NEK1-204ENST00000509912 TTLL8A6PVC2 850 aa6.57□□□□□ -1.36
NEK1-204ENST00000509912 PHF20L1A8MW92 1017 aa6.57□□□□□ -1.36
NEK1-204ENST00000509912 KLF4O43474 513 aa6.57□□□□□ -1.36
NEK1-204ENST00000509912 HTATSF1O43719 755 aaKnown RBP6.57□□□□□ -1.36
NEK1-204ENST00000509912 LIG3P49916 1009 aa6.57□□□□□ -1.36
NEK1-204ENST00000509912 CHMP4BP1P59074 171 aa6.57□□□□□ -1.36
NEK1-204ENST00000509912 TTBK2Q6IQ55 1244 aa6.57□□□□□ -1.36
NEK1-204ENST00000509912 MARCH10Q8NA82 808 aaPredicted RBP6.57□□□□□ -1.36
NEK1-204ENST00000509912 CARD11Q9BXL7 1154 aa6.57□□□□□ -1.36
NEK1-204ENST00000509912 FAM126AQ9BYI3 521 aaPredicted RBP6.57□□□□□ -1.36
NEK1-204ENST00000509912 TOR4AQ9NXH8 423 aa6.57□□□□□ -1.36
NEK1-204ENST00000509912 CNTNAP4Q9C0A0 1308 aa6.57□□□□□ -1.36
NEK1-204ENST00000509912 LAMB4A4D0S4 1761 aa6.57□□□□□ -1.36
NEK1-204ENST00000509912 RAB33AQ14088 237 aa6.57□□□□□ -1.36
NEK1-204ENST00000509912 RASGRP4Q8TDF6 673 aa6.57□□□□□ -1.36
NEK1-204ENST00000509912 LEMD3Q9Y2U8 911 aa6.57□□□□□ -1.36
NEK1-204ENST00000509912 RGPD2P0DJD1 1756 aa6.56□□□□□ -1.36
NEK1-204ENST00000509912 CD33P20138 364 aa6.56□□□□□ -1.36
NEK1-204ENST00000509912 PTPN11Q06124 597 aaPredicted RBP6.56□□□□□ -1.36
NEK1-204ENST00000509912 NOL8Q76FK4 1167 aaKnown RBP6.56□□□□□ -1.36
NEK1-204ENST00000509912 GRIN3AQ8TCU5 1115 aa6.56□□□□□ -1.36
NEK1-204ENST00000509912 STK35Q8TDR2 534 aa6.56□□□□□ -1.36
NEK1-204ENST00000509912 COG3Q96JB2 828 aa6.56□□□□□ -1.36
NEK1-204ENST00000509912 KDM6AO15550 1401 aaPredicted RBP6.56□□□□□ -1.36
NEK1-204ENST00000509912 C4AP0C0L4 1744 aa6.56□□□□□ -1.36
NEK1-204ENST00000509912 NEFLP07196 543 aa6.56□□□□□ -1.36
NEK1-204ENST00000509912 GARTP22102 1010 aa6.56□□□□□ -1.36
NEK1-204ENST00000509912 VEGFBP49765 207 aa6.56□□□□□ -1.36
NEK1-204ENST00000509912 SLC15A2Q16348 729 aa6.56□□□□□ -1.36
NEK1-204ENST00000509912 VIRMAQ69YN4 1812 aaKnown RBP6.56□□□□□ -1.36
NEK1-204ENST00000509912 SHDQ96IW2 340 aa6.56□□□□□ -1.36
NEK1-204ENST00000509912 SLC30A3Q99726 388 aa6.56□□□□□ -1.36
NEK1-204ENST00000509912 TNRC6CQ9HCJ0 1690 aaKnown RBP6.56□□□□□ -1.36
NEK1-204ENST00000509912 FAM86C1Q9NVL1 165 aa6.56□□□□□ -1.36
NEK1-204ENST00000509912 FYB1O15117 783 aa6.55□□□□□ -1.36
NEK1-204ENST00000509912 CANXP27824 592 aaKnown RBP6.55□□□□□ -1.36
NEK1-204ENST00000509912 SPATC1Q76KD6 591 aa6.55□□□□□ -1.36
NEK1-204ENST00000509912 SENP3-EIF4A1A0A087X0R7 540 aa6.55□□□□□ -1.36
NEK1-204ENST00000509912 A0A1B0GTH6 734 aa6.55□□□□□ -1.36
NEK1-204ENST00000509912 UPP2O95045 317 aa6.55□□□□□ -1.36
NEK1-204ENST00000509912 PCNX4Q63HM2 1172 aa6.55□□□□□ -1.36
NEK1-204ENST00000509912 ZFP42Q96MM3 310 aa6.55□□□□□ -1.36
NEK1-204ENST00000509912 NOC4LQ9BVI4 516 aaKnown RBP6.55□□□□□ -1.36
NEK1-204ENST00000509912 TMEM238LA0A1B0GVL6 79 aa6.54□□□□□ -1.36
NEK1-204ENST00000509912 GPR25O00155 361 aa6.54□□□□□ -1.36
NEK1-204ENST00000509912 U2SURPO15042 1029 aaKnown RBP6.54□□□□□ -1.36
NEK1-204ENST00000509912 RPLP1P05386 114 aaKnown RBP6.54□□□□□ -1.36
NEK1-204ENST00000509912 ABHD17AQ96GS6 310 aa6.54□□□□□ -1.36
NEK1-204ENST00000509912 MEGF6O75095 1541 aa6.54□□□□□ -1.36
NEK1-204ENST00000509912 EDN3P14138 238 aa6.54□□□□□ -1.36
NEK1-204ENST00000509912 TXNRD1Q16881 649 aa6.54□□□□□ -1.36
NEK1-204ENST00000509912 MRPL14Q6P1L8 145 aaKnown RBP6.54□□□□□ -1.36
NEK1-204ENST00000509912 ANKRD24Q8TF21 1146 aa6.54□□□□□ -1.36
NEK1-204ENST00000509912 ARMC5Q96C12 935 aa6.54□□□□□ -1.36
NEK1-204ENST00000509912 FRMD6Q96NE9 622 aa6.54□□□□□ -1.36
NEK1-204ENST00000509912 MUC3BQ9H195 1237 aa6.54□□□□□ -1.36
NEK1-204ENST00000509912 DZANK1Q9NVP4 752 aa6.54□□□□□ -1.36
NEK1-204ENST00000509912 ANKIB1Q9P2G1 1089 aa6.54□□□□□ -1.36
NEK1-204ENST00000509912 COL4A3BPQ9Y5P4 624 aa6.54□□□□□ -1.36
NEK1-204ENST00000509912 ZBTB7AO95365 584 aa6.54□□□□□ -1.36
NEK1-204ENST00000509912 SRRTQ9BXP5 876 aaKnown RBP6.54□□□□□ -1.36
NEK1-204ENST00000509912 SRCIN1Q9C0H9 1055 aa6.54□□□□□ -1.36
NEK1-204ENST00000509912 RASSF4Q9H2L5 321 aa6.54□□□□□ -1.36
NEK1-204ENST00000509912 SUPT16HQ9Y5B9 1047 aaKnown RBP6.54□□□□□ -1.36
NEK1-204ENST00000509912 CEMIPQ8WUJ3 1361 aa6.53□□□□□ -1.36
NEK1-204ENST00000509912 EPB42P16452 691 aa6.53□□□□□ -1.36
NEK1-204ENST00000509912 GPC1P35052 558 aa6.53□□□□□ -1.36
NEK1-204ENST00000509912 CCNJLQ8IV13 435 aa6.53□□□□□ -1.36
NEK1-204ENST00000509912 PNMA5Q96PV4 448 aa6.53□□□□□ -1.36
NEK1-204ENST00000509912 FERD3LQ96RJ6 166 aa6.53□□□□□ -1.36
NEK1-204ENST00000509912 GSX2Q9BZM3 304 aa6.53□□□□□ -1.36
NEK1-204ENST00000509912 CBX8Q9HC52 389 aa6.53□□□□□ -1.36
NEK1-204ENST00000509912 BRMS1Q9HCU9 246 aa6.53□□□□□ -1.36
NEK1-204ENST00000509912 SEC31BQ9NQW1 1179 aa6.53□□□□□ -1.36
NEK1-204ENST00000509912 R3HCC1Q9Y3T6 440 aaKnown RBP6.53□□□□□ -1.36
NEK1-204ENST00000509912 SOS1Q07889 1333 aaPredicted RBP6.53□□□□□ -1.36
NEK1-204ENST00000509912 SPATA31C2B4DYI2 1134 aa6.53□□□□□ -1.36
NEK1-204ENST00000509912 PARNO95453 639 aaKnown RBP6.53□□□□□ -1.36
NEK1-204ENST00000509912 PTF1AQ7RTS3 328 aa6.53□□□□□ -1.36
NEK1-204ENST00000509912 RSRP1Q9BUV0 290 aa6.53□□□□□ -1.36
NEK1-204ENST00000509912 LACRTQ9GZZ8 138 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms