RNA–Protein interactions for RNA: ENST00000509743.6

SSBP2-213, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 4

Gene SSBP2, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-213ENST00000509743 GOLPH3LQ9H4A5 285 aa9.06□□□□□ -0.96
SSBP2-213ENST00000509743 SH3GLB2Q9NR46 395 aa9.06□□□□□ -0.96
SSBP2-213ENST00000509743 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.06□□□□□ -0.96
SSBP2-213ENST00000509743 IL17RBQ9NRM6 502 aa9.06□□□□□ -0.96
SSBP2-213ENST00000509743 SWAP70Q9UH65 585 aa9.06□□□□□ -0.96
SSBP2-213ENST00000509743 PLIN4Q96Q06 1357 aa9.06□□□□□ -0.96
SSBP2-213ENST00000509743 ANKRD31Q8N7Z5 1873 aa9.06□□□□□ -0.96
SSBP2-213ENST00000509743 SNED1Q8TER0 1413 aa9.05□□□□□ -0.96
SSBP2-213ENST00000509743 COL11A2P13942 1736 aaPredicted RBP9.05□□□□□ -0.96
SSBP2-213ENST00000509743 USP17L3A6NCW0 530 aa9.05□□□□□ -0.96
SSBP2-213ENST00000509743 USP17L4A6NCW7 530 aa9.05□□□□□ -0.96
SSBP2-213ENST00000509743 BTBD18B2RXH4 712 aa9.05□□□□□ -0.96
SSBP2-213ENST00000509743 ECE2O60344 883 aa9.05□□□□□ -0.96
SSBP2-213ENST00000509743 CUTAO60888 179 aa9.05□□□□□ -0.96
SSBP2-213ENST00000509743 NPM3O75607 178 aaKnown RBP9.05□□□□□ -0.96
SSBP2-213ENST00000509743 HLA-DOAP06340 250 aa9.05□□□□□ -0.96
SSBP2-213ENST00000509743 SCG2P13521 617 aa9.05□□□□□ -0.96
SSBP2-213ENST00000509743 CALML3P27482 149 aa9.05□□□□□ -0.96
SSBP2-213ENST00000509743 CHRNA5P30532 468 aa9.05□□□□□ -0.96
SSBP2-213ENST00000509743 TYRO3Q06418 890 aa9.05□□□□□ -0.96
SSBP2-213ENST00000509743 PTPAQ15257 358 aa9.05□□□□□ -0.96
SSBP2-213ENST00000509743 PKN1Q16512 942 aa9.05□□□□□ -0.96
SSBP2-213ENST00000509743 CAMK4Q16566 473 aa9.05□□□□□ -0.96
SSBP2-213ENST00000509743 SLC4A8Q2Y0W8 1093 aa9.05□□□□□ -0.96
SSBP2-213ENST00000509743 HS1BP3Q53T59 392 aa9.05□□□□□ -0.96
SSBP2-213ENST00000509743 DACT2Q5SW24 774 aa9.05□□□□□ -0.96
SSBP2-213ENST00000509743 USP17L1Q7RTZ2 530 aa9.05□□□□□ -0.96
SSBP2-213ENST00000509743 CMTR1Q8N1G2 835 aaKnown RBP9.05□□□□□ -0.96
SSBP2-213ENST00000509743 CCDC82Q8N4S0 544 aa9.05□□□□□ -0.96
SSBP2-213ENST00000509743 FAM200AQ8TCP9 573 aa9.05□□□□□ -0.96
SSBP2-213ENST00000509743 C7orf43Q8WVR3 580 aa9.05□□□□□ -0.96
SSBP2-213ENST00000509743 ZDHHC15Q96MV8 337 aa9.05□□□□□ -0.96
SSBP2-213ENST00000509743 PHF20Q9BVI0 1012 aa9.05□□□□□ -0.96
SSBP2-213ENST00000509743 EHD4Q9H223 541 aa9.05□□□□□ -0.96
SSBP2-213ENST00000509743 USP40Q9NVE5 1235 aa9.05□□□□□ -0.96
SSBP2-213ENST00000509743 NOL7Q9UMY1 257 aaKnown RBP9.05□□□□□ -0.96
SSBP2-213ENST00000509743 V9GY48 417 aaPredicted RBP9.05□□□□□ -0.96
SSBP2-213ENST00000509743 MYO5AQ9Y4I1 1855 aaKnown RBP9.04□□□□□ -0.96
SSBP2-213ENST00000509743 LAMB1P07942 1786 aa9.04□□□□□ -0.96
SSBP2-213ENST00000509743 FAM237AA0A1B0GTK4 181 aa9.04□□□□□ -0.96
SSBP2-213ENST00000509743 F8W031 263 aaPredicted RBP9.04□□□□□ -0.96
SSBP2-213ENST00000509743 UBE2Q2LH0YL09 131 aa9.04□□□□□ -0.96
SSBP2-213ENST00000509743 WDHD1O75717 1129 aaPredicted RBP9.04□□□□□ -0.96
SSBP2-213ENST00000509743 TOP1P11387 765 aaKnown RBP9.04□□□□□ -0.96
SSBP2-213ENST00000509743 SMARCA1P28370 1054 aa9.04□□□□□ -0.96
SSBP2-213ENST00000509743 CRKP46108 304 aa9.04□□□□□ -0.96
SSBP2-213ENST00000509743 NOVP48745 357 aa9.04□□□□□ -0.96
SSBP2-213ENST00000509743 GABPAQ06546 454 aa9.04□□□□□ -0.96
SSBP2-213ENST00000509743 SNW1Q13573 536 aaKnown RBP9.04□□□□□ -0.96
SSBP2-213ENST00000509743 PFKFB3Q16875 520 aaPredicted RBP9.04□□□□□ -0.96
SSBP2-213ENST00000509743 CCDC93Q567U6 631 aa9.04□□□□□ -0.96
SSBP2-213ENST00000509743 AXDND1Q5T1B0 1012 aaPredicted RBP9.04□□□□□ -0.96
SSBP2-213ENST00000509743 SOGA3Q5TF21 947 aa9.04□□□□□ -0.96
SSBP2-213ENST00000509743 GALNT17Q6IS24 598 aa9.04□□□□□ -0.96
SSBP2-213ENST00000509743 APOBEC3HQ6NTF7 200 aaKnown RBP9.04□□□□□ -0.96
SSBP2-213ENST00000509743 CDC42EP5Q6NZY7 148 aa9.04□□□□□ -0.96
SSBP2-213ENST00000509743 RTKN2Q8IZC4 609 aa9.04□□□□□ -0.96
SSBP2-213ENST00000509743 FMR1NBQ8N0W7 255 aaPredicted RBP9.04□□□□□ -0.96
SSBP2-213ENST00000509743 FAM43AQ8N2R8 423 aa9.04□□□□□ -0.96
SSBP2-213ENST00000509743 SRBD1Q8N5C6 995 aaKnown RBP9.04□□□□□ -0.96
SSBP2-213ENST00000509743 TTLL6Q8N841 843 aa9.04□□□□□ -0.96
SSBP2-213ENST00000509743 KRI1Q8N9T8 703 aaKnown RBP9.04□□□□□ -0.96
SSBP2-213ENST00000509743 SLC44A5Q8NCS7 719 aa9.04□□□□□ -0.96
SSBP2-213ENST00000509743 TIGD1Q96MW7 591 aa9.04□□□□□ -0.96
SSBP2-213ENST00000509743 PSMD1Q99460 953 aa9.04□□□□□ -0.96
SSBP2-213ENST00000509743 OSBPL5Q9H0X9 879 aaPredicted RBP9.04□□□□□ -0.96
SSBP2-213ENST00000509743 VPS33BQ9H267 617 aa9.04□□□□□ -0.96
SSBP2-213ENST00000509743 DHX36Q9H2U1 1008 aaKnown RBP9.04□□□□□ -0.96
SSBP2-213ENST00000509743 DBNDD1Q9H9R9 158 aa9.04□□□□□ -0.96
SSBP2-213ENST00000509743 SERPINB13Q9UIV8 391 aa9.04□□□□□ -0.96
SSBP2-213ENST00000509743 SERPINA10Q9UK55 444 aa9.04□□□□□ -0.96
SSBP2-213ENST00000509743 STX8Q9UNK0 236 aa9.04□□□□□ -0.96
SSBP2-213ENST00000509743 KCNJ14Q9UNX9 436 aa9.04□□□□□ -0.96
SSBP2-213ENST00000509743 QSER1Q2KHR3 1735 aa9.04□□□□□ -0.96
SSBP2-213ENST00000509743 DDX60LQ5H9U9 1706 aaKnown RBP9.03□□□□□ -0.96
SSBP2-213ENST00000509743 TRIM75PA6NK02 468 aa9.03□□□□□ -0.96
SSBP2-213ENST00000509743 TRAPPC10P48553 1259 aa9.03□□□□□ -0.96
SSBP2-213ENST00000509743 SCNN1DP51172 638 aa9.03□□□□□ -0.96
SSBP2-213ENST00000509743 PICALMQ13492 652 aa9.03□□□□□ -0.96
SSBP2-213ENST00000509743 STX1AQ16623 288 aa9.03□□□□□ -0.96
SSBP2-213ENST00000509743 CCDC125Q86Z20 511 aa9.03□□□□□ -0.96
SSBP2-213ENST00000509743 CKAP2LQ8IYA6 745 aa9.03□□□□□ -0.96
SSBP2-213ENST00000509743 CCDC148Q8NFR7 591 aa9.03□□□□□ -0.96
SSBP2-213ENST00000509743 CCDC17Q96LX7 622 aa9.03□□□□□ -0.96
SSBP2-213ENST00000509743 TMEM47Q9BQJ4 181 aa9.03□□□□□ -0.96
SSBP2-213ENST00000509743 SPZ1Q9BXG8 430 aa9.03□□□□□ -0.96
SSBP2-213ENST00000509743 IDI2Q9BXS1 227 aa9.03□□□□□ -0.96
SSBP2-213ENST00000509743 VPS54Q9P1Q0 977 aa9.03□□□□□ -0.96
SSBP2-213ENST00000509743 MAD2L2Q9UI95 211 aa9.03□□□□□ -0.96
SSBP2-213ENST00000509743 MRVI1Q9Y6F6 885 aa9.03□□□□□ -0.96
SSBP2-213ENST00000509743 MYH13Q9UKX3 1938 aa9.02□□□□□ -0.97
SSBP2-213ENST00000509743 PALM3A6NDB9 673 aaPredicted RBP9.02□□□□□ -0.97
SSBP2-213ENST00000509743 hCG_1984214I3L0E3 225 aa9.02□□□□□ -0.97
SSBP2-213ENST00000509743 PPIP5K2O43314 1243 aa9.02□□□□□ -0.97
SSBP2-213ENST00000509743 PARP1P09874 1014 aaKnown RBP9.02□□□□□ -0.97
SSBP2-213ENST00000509743 PFKFB1P16118 471 aa9.02□□□□□ -0.97
SSBP2-213ENST00000509743 MARCKSP29966 332 aaPredicted RBP9.02□□□□□ -0.97
SSBP2-213ENST00000509743 NDUFA8P51970 172 aa9.02□□□□□ -0.97
SSBP2-213ENST00000509743 NLRP5P59047 1200 aa9.02□□□□□ -0.97
SSBP2-213ENST00000509743 NR5A1Q13285 461 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms