RNA–Protein interactions for RNA: ENST00000509431.1

HMGCR-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 421 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-208ENST00000509431 TOX2Q96NM4 488 aa17■□□□□ 0.31
HMGCR-208ENST00000509431 KCNH6Q9H252 994 aa17■□□□□ 0.31
HMGCR-208ENST00000509431 SLC28A3Q9HAS3 691 aa17■□□□□ 0.31
HMGCR-208ENST00000509431 GINM1Q9NU53 330 aa17■□□□□ 0.31
HMGCR-208ENST00000509431 COG5Q9UP83 839 aa17■□□□□ 0.31
HMGCR-208ENST00000509431 LRRC37A2A6NM11 1700 aa16.99■□□□□ 0.31
HMGCR-208ENST00000509431 FAM86C2PA6NEL3 165 aa16.99■□□□□ 0.31
HMGCR-208ENST00000509431 GRXCR1A8MXD5 290 aa16.99■□□□□ 0.31
HMGCR-208ENST00000509431 PI4K2BG5E9Z4 385 aa16.99■□□□□ 0.31
HMGCR-208ENST00000509431 ZBTB22O15209 634 aa16.99■□□□□ 0.31
HMGCR-208ENST00000509431 PQBP1O60828 265 aaKnown RBP16.99■□□□□ 0.31
HMGCR-208ENST00000509431 TIMP1P01033 207 aa16.99■□□□□ 0.31
HMGCR-208ENST00000509431 SKIV2LQ15477 1246 aaKnown RBP16.99■□□□□ 0.31
HMGCR-208ENST00000509431 TMEM240Q5SV17 173 aa16.99■□□□□ 0.31
HMGCR-208ENST00000509431 ANO1Q5XXA6 986 aa16.99■□□□□ 0.31
HMGCR-208ENST00000509431 ZNF236Q9UL36 1845 aa16.98■□□□□ 0.31
HMGCR-208ENST00000509431 DCDC2CA8MYV0 355 aa16.98■□□□□ 0.31
HMGCR-208ENST00000509431 RRP1BQ14684 758 aaKnown RBP16.98■□□□□ 0.31
HMGCR-208ENST00000509431 MFSD5Q6N075 450 aa16.98■□□□□ 0.31
HMGCR-208ENST00000509431 PSRC1Q6PGN9 363 aaPredicted RBP16.98■□□□□ 0.31
HMGCR-208ENST00000509431 ANKRD33Q7Z3H0 272 aa16.98■□□□□ 0.31
HMGCR-208ENST00000509431 NDUFB9Q9Y6M9 179 aa16.98■□□□□ 0.31
HMGCR-208ENST00000509431 TLL1O43897 1013 aa16.97■□□□□ 0.31
HMGCR-208ENST00000509431 CNMDO75829 334 aa16.97■□□□□ 0.31
HMGCR-208ENST00000509431 NHLH1Q02575 133 aa16.97■□□□□ 0.31
HMGCR-208ENST00000509431 USP17L2Q6R6M4 530 aa16.97■□□□□ 0.31
HMGCR-208ENST00000509431 DPP9Q86TI2 863 aa16.97■□□□□ 0.31
HMGCR-208ENST00000509431 MICALL1Q8N3F8 863 aa16.97■□□□□ 0.31
HMGCR-208ENST00000509431 MTIF3Q9H2K0 278 aaKnown RBP16.97■□□□□ 0.31
HMGCR-208ENST00000509431 BICC1Q9H694 974 aaKnown RBP16.97■□□□□ 0.31
HMGCR-208ENST00000509431 CACNA1AO00555 2505 aa16.97■□□□□ 0.31
HMGCR-208ENST00000509431 MROH7-TTC4A0A0A0MT08 1334 aa16.96■□□□□ 0.31
HMGCR-208ENST00000509431 GPR75-ASB3A0A0A6YYF3 556 aa16.96■□□□□ 0.31
HMGCR-208ENST00000509431 RHBDL3P58872 404 aa16.96■□□□□ 0.31
HMGCR-208ENST00000509431 FAAP100Q0VG06 881 aa16.96■□□□□ 0.31
HMGCR-208ENST00000509431 FAM47AQ5JRC9 791 aa16.96■□□□□ 0.31
HMGCR-208ENST00000509431 SPTY2D1Q68D10 685 aaPredicted RBP16.96■□□□□ 0.31
HMGCR-208ENST00000509431 RNF180Q86T96 592 aa16.96■□□□□ 0.31
HMGCR-208ENST00000509431 SRCIN1Q9C0H9 1055 aa16.96■□□□□ 0.31
HMGCR-208ENST00000509431 NKX2-4Q9H2Z4 354 aa16.96■□□□□ 0.31
HMGCR-208ENST00000509431 SLC5A4Q9NY91 659 aa16.96■□□□□ 0.31
HMGCR-208ENST00000509431 CHD9Q3L8U1 2897 aa16.95■□□□□ 0.3
HMGCR-208ENST00000509431 GBF1Q92538 1859 aa16.95■□□□□ 0.3
HMGCR-208ENST00000509431 USP17L15C9J2P7 530 aa16.95■□□□□ 0.3
HMGCR-208ENST00000509431 USP17L13C9JLJ4 530 aa16.95■□□□□ 0.3
HMGCR-208ENST00000509431 USP17L11C9JVI0 530 aa16.95■□□□□ 0.3
HMGCR-208ENST00000509431 USP17L18D6R9N7 530 aa16.95■□□□□ 0.3
HMGCR-208ENST00000509431 USP17L22D6RA61 530 aa16.95■□□□□ 0.3
HMGCR-208ENST00000509431 USP17L17D6RBQ6 530 aa16.95■□□□□ 0.3
HMGCR-208ENST00000509431 USP17L19D6RCP7 530 aa16.95■□□□□ 0.3
HMGCR-208ENST00000509431 USP17L20D6RJB6 530 aa16.95■□□□□ 0.3
HMGCR-208ENST00000509431 STRNO43815 780 aa16.95■□□□□ 0.3
HMGCR-208ENST00000509431 USP17L24Q0WX57 530 aa16.95■□□□□ 0.3
HMGCR-208ENST00000509431 NCBP3Q53F19 620 aaKnown RBP16.95■□□□□ 0.3
HMGCR-208ENST00000509431 LBX2Q6XYB7 198 aa16.95■□□□□ 0.3
HMGCR-208ENST00000509431 SMCHD1A6NHR9 2005 aa16.95■□□□□ 0.3
HMGCR-208ENST00000509431 ZNF521Q96K83 1311 aa16.95■□□□□ 0.3
HMGCR-208ENST00000509431 A0A1W2PQ45 241 aaPredicted RBP16.94■□□□□ 0.3
HMGCR-208ENST00000509431 A0A1W2PQY0 241 aa16.94■□□□□ 0.3
HMGCR-208ENST00000509431 POU3F3P20264 500 aaPredicted RBP16.94■□□□□ 0.3
HMGCR-208ENST00000509431 C16orf59Q7L2K0 433 aa16.94■□□□□ 0.3
HMGCR-208ENST00000509431 TMEM199Q8N511 208 aa16.94■□□□□ 0.3
HMGCR-208ENST00000509431 KHSRPQ92945 711 aaKnown RBP eCLIP16.94■□□□□ 0.31e-8■■□□□ 14.1
HMGCR-208ENST00000509431 XPNPEP3Q9NQH7 507 aa16.94■□□□□ 0.3
HMGCR-208ENST00000509431 PI4KBQ9UBF8 816 aa16.94■□□□□ 0.3
HMGCR-208ENST00000509431 TBX21Q9UL17 535 aa16.94■□□□□ 0.3
HMGCR-208ENST00000509431 PRRC2BQ5JSZ5 2229 aaKnown RBP16.94■□□□□ 0.3
HMGCR-208ENST00000509431 PDS5AQ29RF7 1337 aaKnown RBP16.94■□□□□ 0.3
HMGCR-208ENST00000509431 GTPBP6O43824 516 aaPredicted RBP16.93■□□□□ 0.3
HMGCR-208ENST00000509431 NBPF7P0C2Y1 421 aaPredicted RBP16.93■□□□□ 0.3
HMGCR-208ENST00000509431 RARBP10826 455 aa16.93■□□□□ 0.3
HMGCR-208ENST00000509431 ANKRD44Q8N8A2 993 aa16.93■□□□□ 0.3
HMGCR-208ENST00000509431 C12orf42Q96LP6 360 aa16.93■□□□□ 0.3
HMGCR-208ENST00000509431 DHX36Q9H2U1 1008 aaKnown RBP16.93■□□□□ 0.3
HMGCR-208ENST00000509431 EMILIN3Q9NT22 766 aa16.93■□□□□ 0.3
HMGCR-208ENST00000509431 NRBP1Q9UHY1 535 aa16.93■□□□□ 0.3
HMGCR-208ENST00000509431 MROH7Q68CQ1 1323 aa16.93■□□□□ 0.3
HMGCR-208ENST00000509431 XIRP2A4UGR9 3374 aa16.92■□□□□ 0.3
HMGCR-208ENST00000509431 EYA2O00167 538 aa16.92■□□□□ 0.3
HMGCR-208ENST00000509431 ADORA2AP29274 412 aa16.92■□□□□ 0.3
HMGCR-208ENST00000509431 FOXK2Q01167 660 aa16.92■□□□□ 0.3
HMGCR-208ENST00000509431 ZNF365Q70YC5 407 aa16.92■□□□□ 0.3
HMGCR-208ENST00000509431 KLHDC4Q8TBB5 520 aa16.92■□□□□ 0.3
HMGCR-208ENST00000509431 NUP133Q8WUM0 1156 aa16.92■□□□□ 0.3
HMGCR-208ENST00000509431 TSEN34Q9BSV6 310 aaKnown RBP16.92■□□□□ 0.3
HMGCR-208ENST00000509431 ABCF2Q9UG63 623 aa16.92■□□□□ 0.3
HMGCR-208ENST00000509431 ATP2B3Q16720 1220 aa16.91■□□□□ 0.3
HMGCR-208ENST00000509431 PPP2R2DQ66LE6 453 aa16.91■□□□□ 0.3
HMGCR-208ENST00000509431 STARD7Q9NQZ5 370 aa16.91■□□□□ 0.3
HMGCR-208ENST00000509431 YBX2Q9Y2T7 364 aaKnown RBP16.91■□□□□ 0.3
HMGCR-208ENST00000509431 CHD7Q9P2D1 2997 aa16.9■□□□□ 0.3
HMGCR-208ENST00000509431 VAMP4O75379 141 aa16.9■□□□□ 0.3
HMGCR-208ENST00000509431 LDHCP07864 332 aa16.9■□□□□ 0.3
HMGCR-208ENST00000509431 CSF2RAP15509 400 aa16.9■□□□□ 0.3
HMGCR-208ENST00000509431 PHKA1P46020 1223 aa16.9■□□□□ 0.3
HMGCR-208ENST00000509431 SLC4A10Q6U841 1118 aa16.9■□□□□ 0.3
HMGCR-208ENST00000509431 CATSPERGQ6ZRH7 1159 aa16.9■□□□□ 0.3
HMGCR-208ENST00000509431 HLA-CQ95604 372 aa16.9■□□□□ 0.3
HMGCR-208ENST00000509431 BTBD7Q9P203 1132 aa16.9■□□□□ 0.3
HMGCR-208ENST00000509431 ZBTB21Q9ULJ3 1066 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 147.3 ms