RNA–Protein interactions for RNA: ENST00000509293.1

SPOCK1-206, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 4

Gene SPOCK1, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-206ENST00000509293 ARMC9Q7Z3E5 817 aa16.81■□□□□ 0.28
SPOCK1-206ENST00000509293 SCYL3Q8IZE3 742 aa16.81■□□□□ 0.28
SPOCK1-206ENST00000509293 RBM46Q8TBY0 533 aaKnown RBP16.81■□□□□ 0.28
SPOCK1-206ENST00000509293 BRF1Q92994 677 aa16.81■□□□□ 0.28
SPOCK1-206ENST00000509293 MKL1Q969V6 931 aa16.81■□□□□ 0.28
SPOCK1-206ENST00000509293 CEP95Q96GE4 821 aa16.81■□□□□ 0.28
SPOCK1-206ENST00000509293 ZSCAN31Q96LW9 406 aaPredicted RBP16.81■□□□□ 0.28
SPOCK1-206ENST00000509293 WRNIP1Q96S55 665 aa16.81■□□□□ 0.28
SPOCK1-206ENST00000509293 LIMCH1Q9UPQ0 1083 aa16.81■□□□□ 0.28
SPOCK1-206ENST00000509293 NMT2O60551 498 aa16.8■□□□□ 0.28
SPOCK1-206ENST00000509293 GDF11O95390 407 aa16.8■□□□□ 0.28
SPOCK1-206ENST00000509293 INPP5BP32019 993 aa16.8■□□□□ 0.28
SPOCK1-206ENST00000509293 JAG1P78504 1218 aa16.8■□□□□ 0.28
SPOCK1-206ENST00000509293 MAP3K9P80192 1104 aa16.8■□□□□ 0.28
SPOCK1-206ENST00000509293 SEPT2Q15019 361 aa16.8■□□□□ 0.28
SPOCK1-206ENST00000509293 IFIT1BQ5T764 474 aaKnown RBP16.8■□□□□ 0.28
SPOCK1-206ENST00000509293 SMC1BQ8NDV3 1235 aa16.8■□□□□ 0.28
SPOCK1-206ENST00000509293 ZNF274Q96GC6 653 aaPredicted RBP16.8■□□□□ 0.28
SPOCK1-206ENST00000509293 ZKSCAN3Q9BRR0 538 aa16.8■□□□□ 0.28
SPOCK1-206ENST00000509293 LRRC2Q9BYS8 371 aa16.8■□□□□ 0.28
SPOCK1-206ENST00000509293 TBC1D2Q9BYX2 928 aa16.8■□□□□ 0.28
SPOCK1-206ENST00000509293 TRAF5O00463 557 aa16.79■□□□□ 0.28
SPOCK1-206ENST00000509293 TOMM70O94826 608 aa16.79■□□□□ 0.28
SPOCK1-206ENST00000509293 CD2BP2O95400 341 aaKnown RBP16.79■□□□□ 0.28
SPOCK1-206ENST00000509293 TOP1P11387 765 aaKnown RBP16.79■□□□□ 0.28
SPOCK1-206ENST00000509293 ICA1Q05084 483 aa16.79■□□□□ 0.28
SPOCK1-206ENST00000509293 LDLRAD1Q5T700 205 aa16.79■□□□□ 0.28
SPOCK1-206ENST00000509293 ANKRD13AQ8IZ07 590 aa16.79■□□□□ 0.28
SPOCK1-206ENST00000509293 GPHNQ9NQX3 736 aaPredicted RBP16.79■□□□□ 0.28
SPOCK1-206ENST00000509293 SH2B1Q9NRF2 756 aaPredicted RBP16.79■□□□□ 0.28
SPOCK1-206ENST00000509293 CCDC69A6NI79 296 aa16.78■□□□□ 0.28
SPOCK1-206ENST00000509293 USP17L5A8MUK1 530 aa16.78■□□□□ 0.28
SPOCK1-206ENST00000509293 BECN1Q14457 450 aa16.78■□□□□ 0.28
SPOCK1-206ENST00000509293 PPP2R5BQ15173 497 aa16.78■□□□□ 0.28
SPOCK1-206ENST00000509293 APOA5Q6Q788 366 aa16.78■□□□□ 0.28
SPOCK1-206ENST00000509293 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.78■□□□□ 0.28
SPOCK1-206ENST00000509293 SIAH1Q8IUQ4 282 aa16.78■□□□□ 0.28
SPOCK1-206ENST00000509293 HSCBQ8IWL3 235 aa16.78■□□□□ 0.28
SPOCK1-206ENST00000509293 ZNF784Q8NCA9 323 aaPredicted RBP16.78■□□□□ 0.28
SPOCK1-206ENST00000509293 CHMP4CQ96CF2 233 aa16.78■□□□□ 0.28
SPOCK1-206ENST00000509293 MAP3K14Q99558 947 aa16.78■□□□□ 0.28
SPOCK1-206ENST00000509293 KAT14Q9H8E8 782 aa16.78■□□□□ 0.28
SPOCK1-206ENST00000509293 PICK1Q9NRD5 415 aa16.78■□□□□ 0.28
SPOCK1-206ENST00000509293 TPCN1Q9ULQ1 816 aa16.78■□□□□ 0.28
SPOCK1-206ENST00000509293 STX8Q9UNK0 236 aa16.78■□□□□ 0.28
SPOCK1-206ENST00000509293 PAPPA2Q9BXP8 1791 aa16.78■□□□□ 0.28
SPOCK1-206ENST00000509293 NID2Q14112 1375 aa16.77■□□□□ 0.28
SPOCK1-206ENST00000509293 PASKQ96RG2 1323 aa16.77■□□□□ 0.28
SPOCK1-206ENST00000509293 K7ELQ4 463 aaPredicted RBP16.77■□□□□ 0.28
SPOCK1-206ENST00000509293 DDAH1O94760 285 aa16.77■□□□□ 0.28
SPOCK1-206ENST00000509293 CALM1P0DP23 149 aa16.77■□□□□ 0.28
SPOCK1-206ENST00000509293 CALM2P0DP24 149 aa16.77■□□□□ 0.28
SPOCK1-206ENST00000509293 CALM3P0DP25 149 aa16.77■□□□□ 0.28
SPOCK1-206ENST00000509293 PTPRAP18433 802 aa16.77■□□□□ 0.28
SPOCK1-206ENST00000509293 APOBRQ0VD83 1088 aa16.77■□□□□ 0.28
SPOCK1-206ENST00000509293 RAB3GAP1Q15042 981 aa16.77■□□□□ 0.28
SPOCK1-206ENST00000509293 SHROOM1Q2M3G4 852 aaPredicted RBP16.77■□□□□ 0.28
SPOCK1-206ENST00000509293 SYNE3Q6ZMZ3 975 aa16.77■□□□□ 0.28
SPOCK1-206ENST00000509293 NFXL1Q6ZNB6 911 aa16.77■□□□□ 0.28
SPOCK1-206ENST00000509293 CATIPQ7Z7H3 387 aa16.77■□□□□ 0.28
SPOCK1-206ENST00000509293 TMEM47Q9BQJ4 181 aa16.77■□□□□ 0.28
SPOCK1-206ENST00000509293 WDR18Q9BV38 432 aa16.77■□□□□ 0.28
SPOCK1-206ENST00000509293 SH2D4AQ9H788 454 aa16.77■□□□□ 0.28
SPOCK1-206ENST00000509293 SENP2Q9HC62 589 aa16.77■□□□□ 0.28
SPOCK1-206ENST00000509293 ARHGEF10LQ9HCE6 1279 aa16.77■□□□□ 0.28
SPOCK1-206ENST00000509293 GBA2Q9HCG7 927 aaPredicted RBP16.77■□□□□ 0.28
SPOCK1-206ENST00000509293 CLIP2Q9UDT6 1046 aa16.77■□□□□ 0.28
SPOCK1-206ENST00000509293 BRPF3Q9ULD4 1205 aa16.77■□□□□ 0.28
SPOCK1-206ENST00000509293 CSADQ9Y600 493 aa16.77■□□□□ 0.28
SPOCK1-206ENST00000509293 SLC12A7Q9Y666 1083 aa16.77■□□□□ 0.28
SPOCK1-206ENST00000509293 DOCK1Q14185 1865 aa16.76■□□□□ 0.27
SPOCK1-206ENST00000509293 KLF18A0A0U1RQI7 1052 aa16.76■□□□□ 0.27
SPOCK1-206ENST00000509293 EEF2P13639 858 aaKnown RBP16.76■□□□□ 0.27
SPOCK1-206ENST00000509293 PDIA3P30101 505 aaKnown RBP16.76■□□□□ 0.27
SPOCK1-206ENST00000509293 TROAPQ12815 778 aa16.76■□□□□ 0.27
SPOCK1-206ENST00000509293 FSTL1Q12841 308 aa16.76■□□□□ 0.27
SPOCK1-206ENST00000509293 VGLL4Q14135 290 aa16.76■□□□□ 0.27
SPOCK1-206ENST00000509293 ZNF654Q8IZM8 581 aa16.76■□□□□ 0.27
SPOCK1-206ENST00000509293 C2orf69Q8N8R5 385 aa16.76■□□□□ 0.27
SPOCK1-206ENST00000509293 PNMA1Q8ND90 353 aa16.76■□□□□ 0.27
SPOCK1-206ENST00000509293 ZKSCAN4Q969J2 545 aaPredicted RBP16.76■□□□□ 0.27
SPOCK1-206ENST00000509293 AS3MTQ9HBK9 375 aa16.76■□□□□ 0.27
SPOCK1-206ENST00000509293 TMX2Q9Y320 296 aa16.76■□□□□ 0.27
SPOCK1-206ENST00000509293 SNCAIPQ9Y6H5 919 aa16.76■□□□□ 0.27
SPOCK1-206ENST00000509293 ZBTB43O43298 467 aa16.75■□□□□ 0.27
SPOCK1-206ENST00000509293 PFKFB2O60825 505 aa16.75■□□□□ 0.27
SPOCK1-206ENST00000509293 CELF2O95319 508 aaKnown RBP16.75■□□□□ 0.27
SPOCK1-206ENST00000509293 PRKG1Q13976 671 aa16.75■□□□□ 0.27
SPOCK1-206ENST00000509293 TTLL12Q14166 644 aaPredicted RBP16.75■□□□□ 0.27
SPOCK1-206ENST00000509293 GMCL1P1Q8NEA9 526 aa16.75■□□□□ 0.27
SPOCK1-206ENST00000509293 TMX3Q96JJ7 454 aa16.75■□□□□ 0.27
SPOCK1-206ENST00000509293 HPS5Q9UPZ3 1129 aa16.75■□□□□ 0.27
SPOCK1-206ENST00000509293 PPATQ06203 517 aa16.74■□□□□ 0.27
SPOCK1-206ENST00000509293 FMR1Q06787 632 aaKnown RBP eCLIP16.74■□□□□ 0.27
SPOCK1-206ENST00000509293 ME3Q16798 604 aa16.74■□□□□ 0.27
SPOCK1-206ENST00000509293 CST9Q5W186 159 aa16.74■□□□□ 0.27
SPOCK1-206ENST00000509293 ERO1BQ86YB8 467 aa16.74■□□□□ 0.27
SPOCK1-206ENST00000509293 CLEC10AQ8IUN9 316 aa16.74■□□□□ 0.27
SPOCK1-206ENST00000509293 KIAA1683Q9H0B3 1180 aa16.74■□□□□ 0.27
SPOCK1-206ENST00000509293 SLKQ9H2G2 1235 aaPredicted RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms