RNA–Protein interactions for RNA: ENST00000508841.1

GYPB-210, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 5

Gene GYPB, Length 610 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-210ENST00000508841 UBE3DQ7Z6J8 389 aa9.2□□□□□ -0.94
GYPB-210ENST00000508841 COX4I2Q96KJ9 171 aa9.2□□□□□ -0.94
GYPB-210ENST00000508841 C7orf69Q9H7B7 122 aa9.2□□□□□ -0.94
GYPB-210ENST00000508841 PRDM10Q9NQV6 1147 aa9.2□□□□□ -0.94
GYPB-210ENST00000508841 DNAJA2O60884 412 aa9.19□□□□□ -0.94
GYPB-210ENST00000508841 ETFBP38117 255 aa9.19□□□□□ -0.94
GYPB-210ENST00000508841 ETV3P41162 512 aa9.19□□□□□ -0.94
GYPB-210ENST00000508841 DHX38Q92620 1227 aaKnown RBP9.19□□□□□ -0.94
GYPB-210ENST00000508841 ANTXR1Q9H6X2 564 aa9.19□□□□□ -0.94
GYPB-210ENST00000508841 C1GALT1Q9NS00 363 aa9.19□□□□□ -0.94
GYPB-210ENST00000508841 ACTR10Q9NZ32 417 aa9.19□□□□□ -0.94
GYPB-210ENST00000508841 UPK3BL1B0FP48 263 aa9.18□□□□□ -0.94
GYPB-210ENST00000508841 UPK3BL2E5RIL1 263 aa9.18□□□□□ -0.94
GYPB-210ENST00000508841 GBP1P32455 592 aa9.18□□□□□ -0.94
GYPB-210ENST00000508841 CPSF6Q16630 551 aaKnown RBP eCLIP9.18□□□□□ -0.94
GYPB-210ENST00000508841 RNF43Q68DV7 783 aa9.18□□□□□ -0.94
GYPB-210ENST00000508841 ANKS3Q6ZW76 656 aa9.18□□□□□ -0.94
GYPB-210ENST00000508841 DHRS1Q96LJ7 313 aa9.18□□□□□ -0.94
GYPB-210ENST00000508841 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.18□□□□□ -0.94
GYPB-210ENST00000508841 SMAD7O15105 426 aaKnown RBP9.17□□□□□ -0.94
GYPB-210ENST00000508841 CYP7A1P22680 504 aa9.17□□□□□ -0.94
GYPB-210ENST00000508841 CYP27C1Q4G0S4 372 aa9.17□□□□□ -0.94
GYPB-210ENST00000508841 PRSS36Q5K4E3 855 aa9.17□□□□□ -0.94
GYPB-210ENST00000508841 LETMD1Q6P1Q0 360 aa9.17□□□□□ -0.94
GYPB-210ENST00000508841 ZAR1Q86SH2 424 aa9.17□□□□□ -0.94
GYPB-210ENST00000508841 KRTAP19-1Q8IUB9 90 aa9.17□□□□□ -0.94
GYPB-210ENST00000508841 TBC1D32Q96NH3 1257 aa9.17□□□□□ -0.94
GYPB-210ENST00000508841 MIPEPQ99797 713 aa9.17□□□□□ -0.94
GYPB-210ENST00000508841 DPH2Q9BQC3 489 aaPredicted RBP9.17□□□□□ -0.94
GYPB-210ENST00000508841 DBNDD2Q9BQY9 259 aa9.17□□□□□ -0.94
GYPB-210ENST00000508841 METTL22Q9BUU2 404 aaPredicted RBP9.17□□□□□ -0.94
GYPB-210ENST00000508841 TRIM55Q9BYV6 548 aa9.17□□□□□ -0.94
GYPB-210ENST00000508841 PHAXQ9H814 394 aaKnown RBP9.17□□□□□ -0.94
GYPB-210ENST00000508841 LGR6Q9HBX8 967 aa9.17□□□□□ -0.94
GYPB-210ENST00000508841 HMX2A2RU54 273 aa9.16□□□□□ -0.94
GYPB-210ENST00000508841 U2SURPO15042 1029 aaKnown RBP9.16□□□□□ -0.94
GYPB-210ENST00000508841 DYNC1LI2O43237 492 aaPredicted RBP9.16□□□□□ -0.94
GYPB-210ENST00000508841 CDK5R2Q13319 367 aa9.16□□□□□ -0.94
GYPB-210ENST00000508841 PPP2R5EQ16537 467 aa9.16□□□□□ -0.94
GYPB-210ENST00000508841 BBS9Q3SYG4 887 aa9.16□□□□□ -0.94
GYPB-210ENST00000508841 CEP131Q9UPN4 1083 aa9.16□□□□□ -0.94
GYPB-210ENST00000508841 NFIAQ12857 509 aa9.15□□□□□ -0.94
GYPB-210ENST00000508841 OGFOD3Q6PK18 319 aa9.15□□□□□ -0.94
GYPB-210ENST00000508841 TTC6Q86TZ1 520 aa9.15□□□□□ -0.94
GYPB-210ENST00000508841 TOP6BLQ8N6T0 577 aa9.15□□□□□ -0.94
GYPB-210ENST00000508841 FAM169BQ8N8A8 192 aa9.15□□□□□ -0.94
GYPB-210ENST00000508841 SMARCC1Q92922 1105 aaPredicted RBP9.15□□□□□ -0.94
GYPB-210ENST00000508841 SLC9A7Q96T83 725 aa9.15□□□□□ -0.94
GYPB-210ENST00000508841 KIF2CQ99661 725 aa9.15□□□□□ -0.94
GYPB-210ENST00000508841 DUSP23Q9BVJ7 150 aa9.15□□□□□ -0.94
GYPB-210ENST00000508841 GTF2IRD1Q9UHL9 959 aa9.15□□□□□ -0.94
GYPB-210ENST00000508841 KRTAP4-8A0A0G2JLE6 195 aa9.14□□□□□ -0.95
GYPB-210ENST00000508841 A0A1W2PQH9 124 aa9.14□□□□□ -0.95
GYPB-210ENST00000508841 SLITRK5O94991 958 aa9.14□□□□□ -0.95
GYPB-210ENST00000508841 RNF4P78317 190 aa9.14□□□□□ -0.95
GYPB-210ENST00000508841 RAB33AQ14088 237 aa9.14□□□□□ -0.95
GYPB-210ENST00000508841 FXNQ16595 210 aa9.14□□□□□ -0.95
GYPB-210ENST00000508841 UNC5AQ6ZN44 842 aa9.14□□□□□ -0.95
GYPB-210ENST00000508841 RUFY4Q6ZNE9 571 aa9.14□□□□□ -0.95
GYPB-210ENST00000508841 XAGE3Q8WTP9 111 aa9.14□□□□□ -0.95
GYPB-210ENST00000508841 GOLGA2P5Q9HBQ8 144 aa9.14□□□□□ -0.95
GYPB-210ENST00000508841 SIRPGQ9P1W8 387 aa9.14□□□□□ -0.95
GYPB-210ENST00000508841 KLF4O43474 513 aa9.13□□□□□ -0.95
GYPB-210ENST00000508841 CLEC3AO75596 197 aa9.13□□□□□ -0.95
GYPB-210ENST00000508841 IGLV1-40P01703 118 aa9.13□□□□□ -0.95
GYPB-210ENST00000508841 FAM87AP0C7U9 286 aa9.13□□□□□ -0.95
GYPB-210ENST00000508841 ACRP10323 421 aa9.13□□□□□ -0.95
GYPB-210ENST00000508841 DUSP27Q5VZP5 1158 aa9.13□□□□□ -0.95
GYPB-210ENST00000508841 DNAJB8Q8NHS0 232 aa9.13□□□□□ -0.95
GYPB-210ENST00000508841 BAHD1Q8TBE0 780 aaPredicted RBP9.13□□□□□ -0.95
GYPB-210ENST00000508841 HNRNPLLQ8WVV9 542 aaKnown RBP9.13□□□□□ -0.95
GYPB-210ENST00000508841 GATA6Q92908 595 aa9.13□□□□□ -0.95
GYPB-210ENST00000508841 DNAJC2Q99543 621 aaKnown RBP9.13□□□□□ -0.95
GYPB-210ENST00000508841 ASPNQ9BXN1 380 aa9.13□□□□□ -0.95
GYPB-210ENST00000508841 TPX2Q9ULW0 747 aaKnown RBP9.13□□□□□ -0.95
GYPB-210ENST00000508841 MAPK8IP1Q9UQF2 711 aa9.13□□□□□ -0.95
GYPB-210ENST00000508841 IGF2BP3O00425 579 aaKnown RBP eCLIP9.12□□□□□ -0.95
GYPB-210ENST00000508841 UBOX5O94941 541 aa9.12□□□□□ -0.95
GYPB-210ENST00000508841 FSTP19883 344 aa9.12□□□□□ -0.95
GYPB-210ENST00000508841 PPP1R13LQ8WUF5 828 aa9.12□□□□□ -0.95
GYPB-210ENST00000508841 RNF141Q8WVD5 230 aa9.12□□□□□ -0.95
GYPB-210ENST00000508841 PRDM5Q9NQX1 630 aaPredicted RBP9.12□□□□□ -0.95
GYPB-210ENST00000508841 ATG3Q9NT62 314 aa9.12□□□□□ -0.95
GYPB-210ENST00000508841 KIR3DL1P43629 444 aa9.11□□□□□ -0.95
GYPB-210ENST00000508841 LRP8Q14114 963 aa9.11□□□□□ -0.95
GYPB-210ENST00000508841 NCAPHQ15003 741 aa9.11□□□□□ -0.95
GYPB-210ENST00000508841 C22orf34Q6ZV56 151 aa9.11□□□□□ -0.95
GYPB-210ENST00000508841 MKL1Q969V6 931 aa9.11□□□□□ -0.95
GYPB-210ENST00000508841 MFSD14AQ96MC6 490 aa9.11□□□□□ -0.95
GYPB-210ENST00000508841 SLC6A18Q96N87 628 aa9.11□□□□□ -0.95
GYPB-210ENST00000508841 SUCOQ9UBS9 1254 aaKnown RBP9.11□□□□□ -0.95
GYPB-210ENST00000508841 IGSF3O75054 1194 aa9.1□□□□□ -0.95
GYPB-210ENST00000508841 EOMESO95936 686 aa9.1□□□□□ -0.95
GYPB-210ENST00000508841 POLR2BP30876 1174 aaKnown RBP9.1□□□□□ -0.95
GYPB-210ENST00000508841 ADMP35318 185 aa9.1□□□□□ -0.95
GYPB-210ENST00000508841 PMS1P54277 932 aaKnown RBP9.1□□□□□ -0.95
GYPB-210ENST00000508841 SFRP5Q5T4F7 317 aa9.1□□□□□ -0.95
GYPB-210ENST00000508841 PMFBP1Q8TBY8 1022 aa9.1□□□□□ -0.95
GYPB-210ENST00000508841 FBXL18Q96ME1 805 aa9.1□□□□□ -0.95
GYPB-210ENST00000508841 KREMEN1Q96MU8 473 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms