RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 FAM84BQ96KN1 310 aaPredicted RBP10.9□□□□□ -0.66
COL4A3BP-206ENST00000508809 TEPSINQ96N21 525 aa10.9□□□□□ -0.66
COL4A3BP-206ENST00000508809 VEZTQ9HBM0 779 aa10.9□□□□□ -0.66
COL4A3BP-206ENST00000508809 GDPD2Q9HCC8 539 aa10.9□□□□□ -0.66
COL4A3BP-206ENST00000508809 SZT2Q5T011 3432 aa10.89□□□□□ -0.67
COL4A3BP-206ENST00000508809 CEP290O15078 2479 aa10.89□□□□□ -0.67
COL4A3BP-206ENST00000508809 F6X3S4 739 aa10.89□□□□□ -0.67
COL4A3BP-206ENST00000508809 GRM8O00222 908 aa10.89□□□□□ -0.67
COL4A3BP-206ENST00000508809 TNFAIP1Q13829 316 aa10.89□□□□□ -0.67
COL4A3BP-206ENST00000508809 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.89□□□□□ -0.67
COL4A3BP-206ENST00000508809 TRIM46Q7Z4K8 759 aa10.89□□□□□ -0.67
COL4A3BP-206ENST00000508809 MEIOBQ8N635 442 aa10.89□□□□□ -0.67
COL4A3BP-206ENST00000508809 CD99L2Q8TCZ2 262 aa10.89□□□□□ -0.67
COL4A3BP-206ENST00000508809 ZNF594Q96JF6 807 aaPredicted RBP10.89□□□□□ -0.67
COL4A3BP-206ENST00000508809 TSEN34Q9BSV6 310 aaKnown RBP10.89□□□□□ -0.67
COL4A3BP-206ENST00000508809 EFCC1Q9HA90 598 aa10.89□□□□□ -0.67
COL4A3BP-206ENST00000508809 ZNF70Q9UC06 446 aaPredicted RBP10.89□□□□□ -0.67
COL4A3BP-206ENST00000508809 CHMP3Q9Y3E7 222 aa10.89□□□□□ -0.67
COL4A3BP-206ENST00000508809 OTOFQ9HC10 1997 aa10.88□□□□□ -0.67
COL4A3BP-206ENST00000508809 ESPNB1AK53 854 aa10.88□□□□□ -0.67
COL4A3BP-206ENST00000508809 PLIN1O60240 522 aa10.88□□□□□ -0.67
COL4A3BP-206ENST00000508809 BMP2P12643 396 aa10.88□□□□□ -0.67
COL4A3BP-206ENST00000508809 HIBADHP31937 336 aaKnown RBP10.88□□□□□ -0.67
COL4A3BP-206ENST00000508809 RBM5P52756 815 aaKnown RBP eCLIP10.88□□□□□ -0.67
COL4A3BP-206ENST00000508809 EXOSC9Q06265 439 aaKnown RBP10.88□□□□□ -0.67
COL4A3BP-206ENST00000508809 HABP4Q5JVS0 413 aaKnown RBP10.88□□□□□ -0.67
COL4A3BP-206ENST00000508809 MFSD14BQ5SR56 506 aa10.88□□□□□ -0.67
COL4A3BP-206ENST00000508809 DZIP1LQ8IYY4 767 aaKnown RBP10.88□□□□□ -0.67
COL4A3BP-206ENST00000508809 OPTNQ96CV9 577 aa10.88□□□□□ -0.67
COL4A3BP-206ENST00000508809 CNNM1Q9NRU3 951 aa10.88□□□□□ -0.67
COL4A3BP-206ENST00000508809 TTF2Q9UNY4 1162 aaKnown RBP10.88□□□□□ -0.67
COL4A3BP-206ENST00000508809 JAG2Q9Y219 1238 aa10.88□□□□□ -0.67
COL4A3BP-206ENST00000508809 RIPOR2Q9Y4F9 1068 aa10.88□□□□□ -0.67
COL4A3BP-206ENST00000508809 GPR37L1O60883 481 aa10.87□□□□□ -0.67
COL4A3BP-206ENST00000508809 ALDH1L1O75891 902 aa10.87□□□□□ -0.67
COL4A3BP-206ENST00000508809 HDLBPQ00341 1268 aaKnown RBP10.87□□□□□ -0.67
COL4A3BP-206ENST00000508809 FBXO33Q7Z6M2 555 aa10.87□□□□□ -0.67
COL4A3BP-206ENST00000508809 LINC00528Q8N1L1 170 aa10.87□□□□□ -0.67
COL4A3BP-206ENST00000508809 BRI3BPQ8WY22 251 aa10.87□□□□□ -0.67
COL4A3BP-206ENST00000508809 KAZALD1Q96I82 304 aa10.87□□□□□ -0.67
COL4A3BP-206ENST00000508809 ZFP42Q96MM3 310 aa10.87□□□□□ -0.67
COL4A3BP-206ENST00000508809 PURBQ96QR8 312 aaKnown RBP10.87□□□□□ -0.67
COL4A3BP-206ENST00000508809 MRIQ9BWK5 157 aa10.87□□□□□ -0.67
COL4A3BP-206ENST00000508809 TDRD3Q9H7E2 651 aaKnown RBP10.87□□□□□ -0.67
COL4A3BP-206ENST00000508809 ELP3Q9H9T3 547 aa10.87□□□□□ -0.67
COL4A3BP-206ENST00000508809 EN2P19622 333 aaPredicted RBP10.86□□□□□ -0.67
COL4A3BP-206ENST00000508809 GYG1P46976 350 aa10.86□□□□□ -0.67
COL4A3BP-206ENST00000508809 TAF7LQ5H9L4 462 aa10.86□□□□□ -0.67
COL4A3BP-206ENST00000508809 C6orf118Q5T5N4 469 aa10.86□□□□□ -0.67
COL4A3BP-206ENST00000508809 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.86□□□□□ -0.67
COL4A3BP-206ENST00000508809 ZNF333Q96JL9 665 aa10.86□□□□□ -0.67
COL4A3BP-206ENST00000508809 PUS3Q9BZE2 481 aaKnown RBP10.86□□□□□ -0.67
COL4A3BP-206ENST00000508809 TMEM39BQ9GZU3 492 aa10.86□□□□□ -0.67
COL4A3BP-206ENST00000508809 C9orf78Q9NZ63 289 aaPredicted RBP10.86□□□□□ -0.67
COL4A3BP-206ENST00000508809 UTYO14607 1347 aa10.85□□□□□ -0.67
COL4A3BP-206ENST00000508809 ARAP2Q8WZ64 1704 aa10.85□□□□□ -0.67
COL4A3BP-206ENST00000508809 ERVH48-1M5A8F1 160 aa10.85□□□□□ -0.67
COL4A3BP-206ENST00000508809 CRKP46108 304 aa10.85□□□□□ -0.67
COL4A3BP-206ENST00000508809 TNNI2P48788 182 aa10.85□□□□□ -0.67
COL4A3BP-206ENST00000508809 GTF2A2P52657 109 aa10.85□□□□□ -0.67
COL4A3BP-206ENST00000508809 VGLL4Q14135 290 aa10.85□□□□□ -0.67
COL4A3BP-206ENST00000508809 ARHGEF6Q15052 776 aa10.85□□□□□ -0.67
COL4A3BP-206ENST00000508809 GRIK5Q16478 980 aa10.85□□□□□ -0.67
COL4A3BP-206ENST00000508809 ZFYVE28Q9HCC9 887 aa10.85□□□□□ -0.67
COL4A3BP-206ENST00000508809 RANBP2P49792 3224 aaKnown RBP10.85□□□□□ -0.67
COL4A3BP-206ENST00000508809 CCL15-CCL14A0A0B4J2E2 113 aa10.84□□□□□ -0.67
COL4A3BP-206ENST00000508809 TCP10L2B9ZVM9 353 aa10.84□□□□□ -0.67
COL4A3BP-206ENST00000508809 TAF1CQ15572 869 aaPredicted RBP10.84□□□□□ -0.67
COL4A3BP-206ENST00000508809 CCL15Q16663 113 aa10.84□□□□□ -0.67
COL4A3BP-206ENST00000508809 FKBP1CQ5VVH2 108 aa10.84□□□□□ -0.67
COL4A3BP-206ENST00000508809 NBPF11Q86T75 865 aa10.84□□□□□ -0.67
COL4A3BP-206ENST00000508809 FAM43AQ8N2R8 423 aa10.84□□□□□ -0.67
COL4A3BP-206ENST00000508809 TBC1D22AQ8WUA7 517 aa10.84□□□□□ -0.67
COL4A3BP-206ENST00000508809 SUCLG2Q96I99 432 aa10.84□□□□□ -0.67
COL4A3BP-206ENST00000508809 SRCIN1Q9C0H9 1055 aa10.84□□□□□ -0.67
COL4A3BP-206ENST00000508809 ZCCHC17Q9NP64 241 aaKnown RBP10.84□□□□□ -0.67
COL4A3BP-206ENST00000508809 MROH5Q6ZUA9 1318 aa10.84□□□□□ -0.67
COL4A3BP-206ENST00000508809 TLR2O60603 784 aa10.83□□□□□ -0.68
COL4A3BP-206ENST00000508809 NBPF7P0C2Y1 421 aaPredicted RBP10.83□□□□□ -0.68
COL4A3BP-206ENST00000508809 SNRPBP14678 240 aaKnown RBP10.83□□□□□ -0.68
COL4A3BP-206ENST00000508809 RABL6Q3YEC7 729 aaPredicted RBP10.83□□□□□ -0.68
COL4A3BP-206ENST00000508809 APOBEC3HQ6NTF7 200 aaKnown RBP10.83□□□□□ -0.68
COL4A3BP-206ENST00000508809 Q6ZVU0 165 aa10.83□□□□□ -0.68
COL4A3BP-206ENST00000508809 FAM83AQ86UY5 434 aa10.83□□□□□ -0.68
COL4A3BP-206ENST00000508809 ERO1BQ86YB8 467 aa10.83□□□□□ -0.68
COL4A3BP-206ENST00000508809 VGLL2Q8N8G2 317 aa10.83□□□□□ -0.68
COL4A3BP-206ENST00000508809 ZDHHC15Q96MV8 337 aa10.83□□□□□ -0.68
COL4A3BP-206ENST00000508809 SUGT1Q9Y2Z0 365 aa10.83□□□□□ -0.68
COL4A3BP-206ENST00000508809 CSADQ9Y600 493 aa10.83□□□□□ -0.68
COL4A3BP-206ENST00000508809 PTCH2Q9Y6C5 1203 aa10.83□□□□□ -0.68
COL4A3BP-206ENST00000508809 TRIOBPQ9H2D6 2365 aa10.83□□□□□ -0.68
COL4A3BP-206ENST00000508809 PDE8BO95263 885 aa10.82□□□□□ -0.68
COL4A3BP-206ENST00000508809 GNRH1P01148 92 aa10.82□□□□□ -0.68
COL4A3BP-206ENST00000508809 SOX11P35716 441 aa10.82□□□□□ -0.68
COL4A3BP-206ENST00000508809 CBLBQ13191 982 aa10.82□□□□□ -0.68
COL4A3BP-206ENST00000508809 IRF5Q13568 498 aa10.82□□□□□ -0.68
COL4A3BP-206ENST00000508809 SLC9C1Q4G0N8 1177 aa10.82□□□□□ -0.68
COL4A3BP-206ENST00000508809 LRRC24Q50LG9 513 aa10.82□□□□□ -0.68
COL4A3BP-206ENST00000508809 TMPRSS4Q9NRS4 437 aa10.82□□□□□ -0.68
COL4A3BP-206ENST00000508809 SNCAIPQ9Y6H5 919 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms