RNA–Protein interactions for RNA: ENST00000508459.5

HMGCLL1-208, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-208ENST00000508459 ENAHQ8N8S7 591 aaPredicted RBP16.85■□□□□ 0.29
HMGCLL1-208ENST00000508459 RGS22Q8NE09 1264 aa16.85■□□□□ 0.29
HMGCLL1-208ENST00000508459 CTCFLQ8NI51 663 aaPredicted RBP16.85■□□□□ 0.29
HMGCLL1-208ENST00000508459 LY9Q9HBG7 655 aa16.85■□□□□ 0.29
HMGCLL1-208ENST00000508459 MTMR4Q9NYA4 1195 aa16.85■□□□□ 0.29
HMGCLL1-208ENST00000508459 STX8Q9UNK0 236 aa16.85■□□□□ 0.29
HMGCLL1-208ENST00000508459 CSADQ9Y600 493 aa16.85■□□□□ 0.29
HMGCLL1-208ENST00000508459 KLF18A0A0U1RQI7 1052 aa16.84■□□□□ 0.29
HMGCLL1-208ENST00000508459 PDCP20941 246 aa16.84■□□□□ 0.29
HMGCLL1-208ENST00000508459 NOVP48745 357 aa16.84■□□□□ 0.29
HMGCLL1-208ENST00000508459 METAP2P50579 478 aaKnown RBP eCLIP16.84■□□□□ 0.29
HMGCLL1-208ENST00000508459 ANTXR2P58335 489 aa16.84■□□□□ 0.29
HMGCLL1-208ENST00000508459 TOB2Q14106 344 aaPredicted RBP16.84■□□□□ 0.29
HMGCLL1-208ENST00000508459 SEC23AQ15436 765 aa16.84■□□□□ 0.29
HMGCLL1-208ENST00000508459 APOA5Q6Q788 366 aa16.84■□□□□ 0.29
HMGCLL1-208ENST00000508459 CYB5R4Q7L1T6 521 aa16.84■□□□□ 0.29
HMGCLL1-208ENST00000508459 STK11IPQ8N1F8 1099 aa16.84■□□□□ 0.29
HMGCLL1-208ENST00000508459 TMX3Q96JJ7 454 aa16.84■□□□□ 0.29
HMGCLL1-208ENST00000508459 RRAGCQ9HB90 399 aa16.84■□□□□ 0.29
HMGCLL1-208ENST00000508459 GPBP1L1Q9HC44 474 aaPredicted RBP16.84■□□□□ 0.29
HMGCLL1-208ENST00000508459 ZNF112Q9UJU3 913 aa16.84■□□□□ 0.29
HMGCLL1-208ENST00000508459 TAF6LQ9Y6J9 622 aa16.84■□□□□ 0.29
HMGCLL1-208ENST00000508459 NID2Q14112 1375 aa16.84■□□□□ 0.29
HMGCLL1-208ENST00000508459 GOLGA8BA8MQT2 603 aa16.83■□□□□ 0.28
HMGCLL1-208ENST00000508459 PFKFB2O60825 505 aa16.83■□□□□ 0.28
HMGCLL1-208ENST00000508459 ICA1Q05084 483 aa16.83■□□□□ 0.28
HMGCLL1-208ENST00000508459 SLC4A8Q2Y0W8 1093 aa16.83■□□□□ 0.28
HMGCLL1-208ENST00000508459 FAM47AQ5JRC9 791 aa16.83■□□□□ 0.28
HMGCLL1-208ENST00000508459 NOL9Q5SY16 702 aaKnown RBP16.83■□□□□ 0.28
HMGCLL1-208ENST00000508459 CHRDL2Q6WN34 429 aa16.83■□□□□ 0.28
HMGCLL1-208ENST00000508459 ZNF654Q8IZM8 581 aa16.83■□□□□ 0.28
HMGCLL1-208ENST00000508459 WASF1Q92558 559 aa16.83■□□□□ 0.28
HMGCLL1-208ENST00000508459 MKL1Q969V6 931 aa16.83■□□□□ 0.28
HMGCLL1-208ENST00000508459 GOPCQ9HD26 462 aa16.83■□□□□ 0.28
HMGCLL1-208ENST00000508459 NAP1L2Q9ULW6 460 aaPredicted RBP16.83■□□□□ 0.28
HMGCLL1-208ENST00000508459 IGKV6D-41A0A0C4DH26 115 aa16.82■□□□□ 0.28
HMGCLL1-208ENST00000508459 SMARCA1P28370 1054 aa16.82■□□□□ 0.28
HMGCLL1-208ENST00000508459 USP14P54578 494 aa16.82■□□□□ 0.28
HMGCLL1-208ENST00000508459 TRAF1Q13077 416 aa16.82■□□□□ 0.28
HMGCLL1-208ENST00000508459 CUL4AQ13619 759 aa16.82■□□□□ 0.28
HMGCLL1-208ENST00000508459 GPATCH4Q5T3I0 446 aaKnown RBP16.82■□□□□ 0.28
HMGCLL1-208ENST00000508459 TRIM22Q8IYM9 498 aa16.82■□□□□ 0.28
HMGCLL1-208ENST00000508459 FAM177A1Q8N128 213 aaPredicted RBP16.82■□□□□ 0.28
HMGCLL1-208ENST00000508459 SLC44A5Q8NCS7 719 aa16.82■□□□□ 0.28
HMGCLL1-208ENST00000508459 PNMA1Q8ND90 353 aa16.82■□□□□ 0.28
HMGCLL1-208ENST00000508459 RBM46Q8TBY0 533 aaKnown RBP16.82■□□□□ 0.28
HMGCLL1-208ENST00000508459 ZBTB21Q9ULJ3 1066 aa16.82■□□□□ 0.28
HMGCLL1-208ENST00000508459 SIPA1L1O43166 1804 aa16.82■□□□□ 0.28
HMGCLL1-208ENST00000508459 USP17L5A8MUK1 530 aa16.81■□□□□ 0.28
HMGCLL1-208ENST00000508459 POTECB2RU33 542 aa16.81■□□□□ 0.28
HMGCLL1-208ENST00000508459 CPA1P15085 419 aa16.81■□□□□ 0.28
HMGCLL1-208ENST00000508459 AKR1B1P15121 316 aa16.81■□□□□ 0.28
HMGCLL1-208ENST00000508459 PDIA3P30101 505 aaKnown RBP16.81■□□□□ 0.28
HMGCLL1-208ENST00000508459 AKAP17AQ02040 695 aaKnown RBP16.81■□□□□ 0.28
HMGCLL1-208ENST00000508459 ASPRV1Q53RT3 343 aa16.81■□□□□ 0.28
HMGCLL1-208ENST00000508459 NBPF12Q5TAG4 269 aaPredicted RBP16.81■□□□□ 0.28
HMGCLL1-208ENST00000508459 CHADLQ6NUI6 762 aa16.81■□□□□ 0.28
HMGCLL1-208ENST00000508459 ANKRD13AQ8IZ07 590 aa16.81■□□□□ 0.28
HMGCLL1-208ENST00000508459 SCYL3Q8IZE3 742 aa16.81■□□□□ 0.28
HMGCLL1-208ENST00000508459 GMCL1P1Q8NEA9 526 aa16.81■□□□□ 0.28
HMGCLL1-208ENST00000508459 GTF3C6Q969F1 213 aa16.81■□□□□ 0.28
HMGCLL1-208ENST00000508459 CEP95Q96GE4 821 aa16.81■□□□□ 0.28
HMGCLL1-208ENST00000508459 WRNIP1Q96S55 665 aa16.81■□□□□ 0.28
HMGCLL1-208ENST00000508459 DNAJC18Q9H819 358 aa16.81■□□□□ 0.28
HMGCLL1-208ENST00000508459 GREB1LQ9C091 1923 aaPredicted RBP16.8■□□□□ 0.28
HMGCLL1-208ENST00000508459 GOLGA8AA7E2F4 631 aa16.8■□□□□ 0.28
HMGCLL1-208ENST00000508459 GH2P01242 217 aa16.8■□□□□ 0.28
HMGCLL1-208ENST00000508459 MAP3K9P80192 1104 aa16.8■□□□□ 0.28
HMGCLL1-208ENST00000508459 APOBRQ0VD83 1088 aa16.8■□□□□ 0.28
HMGCLL1-208ENST00000508459 RAB3GAP1Q15042 981 aa16.8■□□□□ 0.28
HMGCLL1-208ENST00000508459 MAP3K11Q16584 847 aa16.8■□□□□ 0.28
HMGCLL1-208ENST00000508459 RTN1Q16799 776 aa16.8■□□□□ 0.28
HMGCLL1-208ENST00000508459 CHST3Q7LGC8 479 aa16.8■□□□□ 0.28
HMGCLL1-208ENST00000508459 FANCBQ8NB91 859 aa16.8■□□□□ 0.28
HMGCLL1-208ENST00000508459 DCAF4Q8WV16 495 aa16.8■□□□□ 0.28
HMGCLL1-208ENST00000508459 LPAR1Q92633 364 aa16.8■□□□□ 0.28
HMGCLL1-208ENST00000508459 KLRG1Q96E93 195 aa16.8■□□□□ 0.28
HMGCLL1-208ENST00000508459 CDCA5Q96FF9 252 aa16.8■□□□□ 0.28
HMGCLL1-208ENST00000508459 PNMA2Q9UL42 364 aa16.8■□□□□ 0.28
HMGCLL1-208ENST00000508459 TPCN1Q9ULQ1 816 aa16.8■□□□□ 0.28
HMGCLL1-208ENST00000508459 SMC3Q9UQE7 1217 aa16.8■□□□□ 0.28
HMGCLL1-208ENST00000508459 POLR2AP24928 1970 aaKnown RBP16.8■□□□□ 0.28
HMGCLL1-208ENST00000508459 PHF20L1A8MW92 1017 aa16.79■□□□□ 0.28
HMGCLL1-208ENST00000508459 C19orf81C9J6K1 198 aa16.79■□□□□ 0.28
HMGCLL1-208ENST00000508459 XBP1P17861 261 aa16.79■□□□□ 0.28
HMGCLL1-208ENST00000508459 TTLL12Q14166 644 aaPredicted RBP16.79■□□□□ 0.28
HMGCLL1-208ENST00000508459 MIGA2Q7L4E1 593 aa16.79■□□□□ 0.28
HMGCLL1-208ENST00000508459 C2orf69Q8N8R5 385 aa16.79■□□□□ 0.28
HMGCLL1-208ENST00000508459 TCEANC2Q96MN5 208 aa16.79■□□□□ 0.28
HMGCLL1-208ENST00000508459 TMEM47Q9BQJ4 181 aa16.79■□□□□ 0.28
HMGCLL1-208ENST00000508459 ZKSCAN3Q9BRR0 538 aa16.79■□□□□ 0.28
HMGCLL1-208ENST00000508459 LRRC2Q9BYS8 371 aa16.79■□□□□ 0.28
HMGCLL1-208ENST00000508459 INCENPQ9NQS7 918 aa16.79■□□□□ 0.28
HMGCLL1-208ENST00000508459 IL17RBQ9NRM6 502 aa16.79■□□□□ 0.28
HMGCLL1-208ENST00000508459 CLIP2Q9UDT6 1046 aa16.79■□□□□ 0.28
HMGCLL1-208ENST00000508459 CIZ1Q9ULV3 898 aaPredicted RBP16.79■□□□□ 0.28
HMGCLL1-208ENST00000508459 DOCK1Q14185 1865 aa16.78■□□□□ 0.28
HMGCLL1-208ENST00000508459 ASTN2O75129 1339 aaPredicted RBP16.78■□□□□ 0.28
HMGCLL1-208ENST00000508459 PARP1P09874 1014 aaKnown RBP16.78■□□□□ 0.28
HMGCLL1-208ENST00000508459 ME3Q16798 604 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms