RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 UBAC1Q9BSL1 405 aa12.09□□□□□ -0.47
HTT-204ENST00000508321 KCNH4Q9UQ05 1017 aa12.09□□□□□ -0.47
HTT-204ENST00000508321 B4E1Z4 1266 aa12.08□□□□□ -0.48
HTT-204ENST00000508321 CXCL11O14625 94 aa12.08□□□□□ -0.48
HTT-204ENST00000508321 KDM4AO75164 1064 aa12.08□□□□□ -0.48
HTT-204ENST00000508321 TTLL1O95922 423 aa12.08□□□□□ -0.48
HTT-204ENST00000508321 SLURP2P0DP57 97 aa12.08□□□□□ -0.48
HTT-204ENST00000508321 GUCY1A2P33402 732 aa12.08□□□□□ -0.48
HTT-204ENST00000508321 MCM5P33992 734 aa12.08□□□□□ -0.48
HTT-204ENST00000508321 NOVP48745 357 aa12.08□□□□□ -0.48
HTT-204ENST00000508321 GTF2A2P52657 109 aa12.08□□□□□ -0.48
HTT-204ENST00000508321 RAB3GAP1Q15042 981 aa12.08□□□□□ -0.48
HTT-204ENST00000508321 DEFB115Q30KQ5 88 aa12.08□□□□□ -0.48
HTT-204ENST00000508321 SPRYD7Q5W111 196 aa12.08□□□□□ -0.48
HTT-204ENST00000508321 STOX1Q6ZVD7 989 aa12.08□□□□□ -0.48
HTT-204ENST00000508321 MB21D2Q8IYB1 491 aaPredicted RBP12.08□□□□□ -0.48
HTT-204ENST00000508321 OTUD5Q96G74 571 aa12.08□□□□□ -0.48
HTT-204ENST00000508321 TTC14Q96N46 770 aa12.08□□□□□ -0.48
HTT-204ENST00000508321 BACH2Q9BYV9 841 aa12.08□□□□□ -0.48
HTT-204ENST00000508321 NYAP2Q9P242 653 aa12.08□□□□□ -0.48
HTT-204ENST00000508321 ERICH2A1L162 156 aa12.07□□□□□ -0.48
HTT-204ENST00000508321 MANSC4A6NHS7 340 aaPredicted RBP12.07□□□□□ -0.48
HTT-204ENST00000508321 C19orf81C9J6K1 198 aa12.07□□□□□ -0.48
HTT-204ENST00000508321 RBM25P49756 843 aaKnown RBP12.07□□□□□ -0.48
HTT-204ENST00000508321 SREBF2Q12772 1141 aa12.07□□□□□ -0.48
HTT-204ENST00000508321 SNAPC2Q13487 334 aa12.07□□□□□ -0.48
HTT-204ENST00000508321 SEPT2Q15019 361 aa12.07□□□□□ -0.48
HTT-204ENST00000508321 PAXIP1Q6ZW49 1069 aaPredicted RBP12.07□□□□□ -0.48
HTT-204ENST00000508321 DGKHQ86XP1 1220 aa12.07□□□□□ -0.48
HTT-204ENST00000508321 STK11IPQ8N1F8 1099 aa12.07□□□□□ -0.48
HTT-204ENST00000508321 PROCA1Q8NCQ7 364 aaPredicted RBP12.07□□□□□ -0.48
HTT-204ENST00000508321 CEP95Q96GE4 821 aa12.07□□□□□ -0.48
HTT-204ENST00000508321 CAPNS2Q96L46 248 aa12.07□□□□□ -0.48
HTT-204ENST00000508321 NEK1Q96PY6 1258 aa12.07□□□□□ -0.48
HTT-204ENST00000508321 FEZ1Q99689 392 aa12.07□□□□□ -0.48
HTT-204ENST00000508321 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.07□□□□□ -0.48
HTT-204ENST00000508321 TM6SF1Q9BZW5 370 aa12.07□□□□□ -0.48
HTT-204ENST00000508321 KIAA1683Q9H0B3 1180 aa12.07□□□□□ -0.48
HTT-204ENST00000508321 MTMR4Q9NYA4 1195 aa12.07□□□□□ -0.48
HTT-204ENST00000508321 AFG3L2Q9Y4W6 797 aa12.07□□□□□ -0.48
HTT-204ENST00000508321 SNX14Q9Y5W7 946 aa12.07□□□□□ -0.48
HTT-204ENST00000508321 TACC3Q9Y6A5 838 aa12.07□□□□□ -0.48
HTT-204ENST00000508321 ZHX2Q9Y6X8 837 aa12.07□□□□□ -0.48
HTT-204ENST00000508321 A0A0G2JLL6 359 aaPredicted RBP12.06□□□□□ -0.48
HTT-204ENST00000508321 FAM155AB1AL88 458 aaPredicted RBP12.06□□□□□ -0.48
HTT-204ENST00000508321 USP17L10C9JJH3 530 aa12.06□□□□□ -0.48
HTT-204ENST00000508321 IRF6O14896 467 aa12.06□□□□□ -0.48
HTT-204ENST00000508321 CETPP11597 493 aa12.06□□□□□ -0.48
HTT-204ENST00000508321 BACE1P56817 501 aa12.06□□□□□ -0.48
HTT-204ENST00000508321 INHBEP58166 350 aa12.06□□□□□ -0.48
HTT-204ENST00000508321 SH3D19Q5HYK7 790 aa12.06□□□□□ -0.48
HTT-204ENST00000508321 FAM47AQ5JRC9 791 aa12.06□□□□□ -0.48
HTT-204ENST00000508321 FASTKD5Q7L8L6 764 aaKnown RBP12.06□□□□□ -0.48
HTT-204ENST00000508321 PRRT2Q7Z6L0 340 aaPredicted RBP12.06□□□□□ -0.48
HTT-204ENST00000508321 RASEFQ8IZ41 740 aa12.06□□□□□ -0.48
HTT-204ENST00000508321 GMCL1P1Q8NEA9 526 aa12.06□□□□□ -0.48
HTT-204ENST00000508321 LPAR1Q92633 364 aa12.06□□□□□ -0.48
HTT-204ENST00000508321 TMEM87BQ96K49 555 aa12.06□□□□□ -0.48
HTT-204ENST00000508321 C12orf42Q96LP6 360 aa12.06□□□□□ -0.48
HTT-204ENST00000508321 ZSCAN10Q96SZ4 725 aaPredicted RBP12.06□□□□□ -0.48
HTT-204ENST00000508321 GOPCQ9HD26 462 aa12.06□□□□□ -0.48
HTT-204ENST00000508321 ZCCHC17Q9NP64 241 aaKnown RBP12.06□□□□□ -0.48
HTT-204ENST00000508321 PARP14Q460N5 1801 aa12.06□□□□□ -0.48
HTT-204ENST00000508321 TNKSO95271 1327 aa12.06□□□□□ -0.48
HTT-204ENST00000508321 TRIM75PA6NK02 468 aa12.05□□□□□ -0.48
HTT-204ENST00000508321 MAP2K2P36507 400 aa12.05□□□□□ -0.48
HTT-204ENST00000508321 JAG1P78504 1218 aa12.05□□□□□ -0.48
HTT-204ENST00000508321 MTMR2Q13614 643 aa12.05□□□□□ -0.48
HTT-204ENST00000508321 BLOC1S2Q6QNY1 142 aa12.05□□□□□ -0.48
HTT-204ENST00000508321 USP17L2Q6R6M4 530 aa12.05□□□□□ -0.48
HTT-204ENST00000508321 DHX32Q7L7V1 743 aaKnown RBP12.05□□□□□ -0.48
HTT-204ENST00000508321 ANKS1AQ92625 1134 aa12.05□□□□□ -0.48
HTT-204ENST00000508321 MKL1Q969V6 931 aa12.05□□□□□ -0.48
HTT-204ENST00000508321 JAKMIP1Q96N16 626 aaKnown RBP12.05□□□□□ -0.48
HTT-204ENST00000508321 C22orf23Q9BZE7 217 aa12.05□□□□□ -0.48
HTT-204ENST00000508321 TMOD4Q9NZQ9 345 aa12.05□□□□□ -0.48
HTT-204ENST00000508321 ZSWIM5Q9P217 1185 aa12.05□□□□□ -0.48
HTT-204ENST00000508321 STX8Q9UNK0 236 aa12.05□□□□□ -0.48
HTT-204ENST00000508321 SLC45A1Q9Y2W3 748 aa12.05□□□□□ -0.48
HTT-204ENST00000508321 TMX2Q9Y320 296 aa12.05□□□□□ -0.48
HTT-204ENST00000508321 TAF6LQ9Y6J9 622 aa12.05□□□□□ -0.48
HTT-204ENST00000508321 PCNTO95613 3336 aa12.04□□□□□ -0.48
HTT-204ENST00000508321 TESPA1A2RU30 521 aaPredicted RBP12.04□□□□□ -0.48
HTT-204ENST00000508321 PRC1O43663 620 aa12.04□□□□□ -0.48
HTT-204ENST00000508321 SEC24BO95487 1268 aa12.04□□□□□ -0.48
HTT-204ENST00000508321 TOP1P11387 765 aaKnown RBP12.04□□□□□ -0.48
HTT-204ENST00000508321 EEF2P13639 858 aaKnown RBP12.04□□□□□ -0.48
HTT-204ENST00000508321 CASTP20810 708 aaKnown RBP12.04□□□□□ -0.48
HTT-204ENST00000508321 GJA5P36382 358 aa12.04□□□□□ -0.48
HTT-204ENST00000508321 SPP2Q13103 211 aa12.04□□□□□ -0.48
HTT-204ENST00000508321 PABPC4Q13310 644 aaKnown RBP eCLIP12.04□□□□□ -0.48
HTT-204ENST00000508321 SHROOM1Q2M3G4 852 aaPredicted RBP12.04□□□□□ -0.48
HTT-204ENST00000508321 OTUD7BQ6GQQ9 843 aa12.04□□□□□ -0.48
HTT-204ENST00000508321 CYP4F22Q6NT55 531 aa12.04□□□□□ -0.48
HTT-204ENST00000508321 TNS4Q8IZW8 715 aa12.04□□□□□ -0.48
HTT-204ENST00000508321 TMTC2Q8N394 836 aa12.04□□□□□ -0.48
HTT-204ENST00000508321 FBXL16Q8N461 479 aa12.04□□□□□ -0.48
HTT-204ENST00000508321 ENAHQ8N8S7 591 aaPredicted RBP12.04□□□□□ -0.48
HTT-204ENST00000508321 VCPKMTQ9H867 229 aa12.04□□□□□ -0.48
HTT-204ENST00000508321 INCENPQ9NQS7 918 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms