RNA–Protein interactions for RNA: ENST00000508308.1

HMGN1P16-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 16, humanhuman

BASIC

Gene HMGN1P16, Length 283 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P16-201ENST00000508308 A0A0C4DFX4 3053 aa7.87□□□□□ -1.15
HMGN1P16-201ENST00000508308 DDX60LQ5H9U9 1706 aaKnown RBP7.87□□□□□ -1.15
HMGN1P16-201ENST00000508308 BAG3O95817 575 aa7.87□□□□□ -1.15
HMGN1P16-201ENST00000508308 CYP7A1P22680 504 aa7.87□□□□□ -1.15
HMGN1P16-201ENST00000508308 HOXA7P31268 230 aaPredicted RBP7.87□□□□□ -1.15
HMGN1P16-201ENST00000508308 GCLCP48506 637 aaPredicted RBP7.87□□□□□ -1.15
HMGN1P16-201ENST00000508308 LSM11P83369 360 aaKnown RBP eCLIP7.87□□□□□ -1.15
HMGN1P16-201ENST00000508308 FTSJ3Q8IY81 847 aaKnown RBP7.87□□□□□ -1.15
HMGN1P16-201ENST00000508308 P2RX7Q99572 595 aaKnown RBP7.87□□□□□ -1.15
HMGN1P16-201ENST00000508308 TBC1D2Q9BYX2 928 aa7.87□□□□□ -1.15
HMGN1P16-201ENST00000508308 CRISPLD2Q9H0B8 497 aa7.87□□□□□ -1.15
HMGN1P16-201ENST00000508308 RBPJLQ9UBG7 517 aa7.87□□□□□ -1.15
HMGN1P16-201ENST00000508308 MORF4L1Q9UBU8 362 aa7.87□□□□□ -1.15
HMGN1P16-201ENST00000508308 ZBTB21Q9ULJ3 1066 aa7.87□□□□□ -1.15
HMGN1P16-201ENST00000508308 ZBED9Q6R2W3 1325 aa7.86□□□□□ -1.15
HMGN1P16-201ENST00000508308 IGSF3O75054 1194 aa7.86□□□□□ -1.15
HMGN1P16-201ENST00000508308 IDH1O75874 414 aaKnown RBP7.86□□□□□ -1.15
HMGN1P16-201ENST00000508308 ASNSP08243 561 aa7.86□□□□□ -1.15
HMGN1P16-201ENST00000508308 HERVK_113P62684 666 aa7.86□□□□□ -1.15
HMGN1P16-201ENST00000508308 UBXN2AP68543 259 aa7.86□□□□□ -1.15
HMGN1P16-201ENST00000508308 Q3C1V9 767 aa7.86□□□□□ -1.15
HMGN1P16-201ENST00000508308 TATDN1Q6P1N9 297 aa7.86□□□□□ -1.15
HMGN1P16-201ENST00000508308 MAGEB6Q8N7X4 407 aa7.86□□□□□ -1.15
HMGN1P16-201ENST00000508308 NKX2-3Q8TAU0 364 aa7.86□□□□□ -1.15
HMGN1P16-201ENST00000508308 USP6NLQ92738 828 aa7.86□□□□□ -1.15
HMGN1P16-201ENST00000508308 COA7Q96BR5 231 aa7.86□□□□□ -1.15
HMGN1P16-201ENST00000508308 DEFB118Q96PH6 123 aa7.86□□□□□ -1.15
HMGN1P16-201ENST00000508308 RIOK1Q9BRS2 568 aaKnown RBP7.86□□□□□ -1.15
HMGN1P16-201ENST00000508308 NOL10Q9BSC4 688 aaKnown RBP7.86□□□□□ -1.15
HMGN1P16-201ENST00000508308 AS3MTQ9HBK9 375 aa7.86□□□□□ -1.15
HMGN1P16-201ENST00000508308 IL1RAPL2Q9NP60 686 aa7.86□□□□□ -1.15
HMGN1P16-201ENST00000508308 PNMA3Q9UL41 463 aa7.86□□□□□ -1.15
HMGN1P16-201ENST00000508308 TCRBV5S4A2TA0A5A2 114 aa7.85□□□□□ -1.15
HMGN1P16-201ENST00000508308 USP17L10C9JJH3 530 aa7.85□□□□□ -1.15
HMGN1P16-201ENST00000508308 CNMDO75829 334 aa7.85□□□□□ -1.15
HMGN1P16-201ENST00000508308 FARP2O94887 1054 aaPredicted RBP7.85□□□□□ -1.15
HMGN1P16-201ENST00000508308 GH2P01242 217 aa7.85□□□□□ -1.15
HMGN1P16-201ENST00000508308 GUCY1A2P33402 732 aa7.85□□□□□ -1.15
HMGN1P16-201ENST00000508308 SHMT1P34896 483 aa7.85□□□□□ -1.15
HMGN1P16-201ENST00000508308 PLCD1P51178 756 aa7.85□□□□□ -1.15
HMGN1P16-201ENST00000508308 PABPC4Q13310 644 aaKnown RBP eCLIP7.85□□□□□ -1.15
HMGN1P16-201ENST00000508308 DIEXFQ68CQ4 756 aaKnown RBP7.85□□□□□ -1.15
HMGN1P16-201ENST00000508308 AACSQ86V21 672 aa7.85□□□□□ -1.15
HMGN1P16-201ENST00000508308 RHPN1Q8TCX5 695 aa7.85□□□□□ -1.15
HMGN1P16-201ENST00000508308 DIS3LQ8TF46 1054 aaKnown RBP7.85□□□□□ -1.15
HMGN1P16-201ENST00000508308 TRIB2Q92519 343 aa7.85□□□□□ -1.15
HMGN1P16-201ENST00000508308 DPF3Q92784 378 aa7.85□□□□□ -1.15
HMGN1P16-201ENST00000508308 EHD4Q9H223 541 aa7.85□□□□□ -1.15
HMGN1P16-201ENST00000508308 PORCNQ9H237 461 aa7.85□□□□□ -1.15
HMGN1P16-201ENST00000508308 GINM1Q9NU53 330 aa7.85□□□□□ -1.15
HMGN1P16-201ENST00000508308 ZBTB40Q9NUA8 1239 aa7.85□□□□□ -1.15
HMGN1P16-201ENST00000508308 RBM27Q9P2N5 1060 aaKnown RBP7.85□□□□□ -1.15
HMGN1P16-201ENST00000508308 TAOK2Q9UL54 1235 aa7.85□□□□□ -1.15
HMGN1P16-201ENST00000508308 RLFQ13129 1914 aa7.84□□□□□ -1.15
HMGN1P16-201ENST00000508308 C19orf81C9J6K1 198 aa7.84□□□□□ -1.15
HMGN1P16-201ENST00000508308 SMIM22K7EJ46 135 aa7.84□□□□□ -1.15
HMGN1P16-201ENST00000508308 TFRCP02786 760 aaKnown RBP7.84□□□□□ -1.15
HMGN1P16-201ENST00000508308 HMGCRP04035 888 aa7.84□□□□□ -1.15
HMGN1P16-201ENST00000508308 CHGBP05060 677 aa7.84□□□□□ -1.15
HMGN1P16-201ENST00000508308 NUBP1P53384 320 aa7.84□□□□□ -1.15
HMGN1P16-201ENST00000508308 GABPAQ06546 454 aa7.84□□□□□ -1.15
HMGN1P16-201ENST00000508308 SLFNL1Q499Z3 407 aa7.84□□□□□ -1.15
HMGN1P16-201ENST00000508308 MAP3K21Q5TCX8 1036 aa7.84□□□□□ -1.15
HMGN1P16-201ENST00000508308 CRACR2BQ8N4Y2 399 aaPredicted RBP7.84□□□□□ -1.15
HMGN1P16-201ENST00000508308 ACER1Q8TDN7 264 aa7.84□□□□□ -1.15
HMGN1P16-201ENST00000508308 EDC3Q96F86 508 aaKnown RBP7.84□□□□□ -1.15
HMGN1P16-201ENST00000508308 PAWRQ96IZ0 340 aaKnown RBP7.84□□□□□ -1.15
HMGN1P16-201ENST00000508308 C12orf42Q96LP6 360 aa7.84□□□□□ -1.15
HMGN1P16-201ENST00000508308 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.84□□□□□ -1.15
HMGN1P16-201ENST00000508308 NAV1Q8NEY1 1877 aa7.83□□□□□ -1.16
HMGN1P16-201ENST00000508308 A0A1W2PRG0 241 aa7.83□□□□□ -1.16
HMGN1P16-201ENST00000508308 HLA-DOAP06340 250 aa7.83□□□□□ -1.16
HMGN1P16-201ENST00000508308 PDE6AP16499 860 aa7.83□□□□□ -1.16
HMGN1P16-201ENST00000508308 CYP2B6P20813 491 aa7.83□□□□□ -1.16
HMGN1P16-201ENST00000508308 ERVK-9P63128 1117 aa7.83□□□□□ -1.16
HMGN1P16-201ENST00000508308 ERVK-24P63145 666 aa7.83□□□□□ -1.16
HMGN1P16-201ENST00000508308 IRX3P78415 501 aaPredicted RBP7.83□□□□□ -1.16
HMGN1P16-201ENST00000508308 MAP3K12Q12852 859 aa7.83□□□□□ -1.16
HMGN1P16-201ENST00000508308 CCL14Q16627 93 aa7.83□□□□□ -1.16
HMGN1P16-201ENST00000508308 KIAA1755Q5JYT7 1200 aa7.83□□□□□ -1.16
HMGN1P16-201ENST00000508308 MORN1Q5T089 497 aa7.83□□□□□ -1.16
HMGN1P16-201ENST00000508308 USP17L2Q6R6M4 530 aa7.83□□□□□ -1.16
HMGN1P16-201ENST00000508308 ERC1Q8IUD2 1116 aa7.83□□□□□ -1.16
HMGN1P16-201ENST00000508308 GPRC5AQ8NFJ5 357 aa7.83□□□□□ -1.16
HMGN1P16-201ENST00000508308 HTATIP2Q9BUP3 242 aa7.83□□□□□ -1.16
HMGN1P16-201ENST00000508308 ZSWIM6Q9HCJ5 1215 aa7.83□□□□□ -1.16
HMGN1P16-201ENST00000508308 TMOD4Q9NZQ9 345 aa7.83□□□□□ -1.16
HMGN1P16-201ENST00000508308 SERPINB13Q9UIV8 391 aa7.83□□□□□ -1.16
HMGN1P16-201ENST00000508308 COG6Q9Y2V7 657 aa7.83□□□□□ -1.16
HMGN1P16-201ENST00000508308 RPTORQ8N122 1335 aa7.82□□□□□ -1.16
HMGN1P16-201ENST00000508308 ZNF532Q9HCE3 1301 aa7.82□□□□□ -1.16
HMGN1P16-201ENST00000508308 MAGEB6P1A0A0J9YX57 407 aa7.82□□□□□ -1.16
HMGN1P16-201ENST00000508308 APBB1O00213 710 aa7.82□□□□□ -1.16
HMGN1P16-201ENST00000508308 GOLIM4O00461 696 aa7.82□□□□□ -1.16
HMGN1P16-201ENST00000508308 IGHA2P01877 340 aa7.82□□□□□ -1.16
HMGN1P16-201ENST00000508308 CYP2D6P10635 497 aa7.82□□□□□ -1.16
HMGN1P16-201ENST00000508308 XRCC5P13010 732 aaKnown RBP7.82□□□□□ -1.16
HMGN1P16-201ENST00000508308 VCAM1P19320 739 aa7.82□□□□□ -1.16
HMGN1P16-201ENST00000508308 USP5P45974 858 aa7.82□□□□□ -1.16
HMGN1P16-201ENST00000508308 SEPT2Q15019 361 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms