RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 CAPN6Q9Y6Q1 641 aa8.59□□□□□ -1.03
DHFR-204ENST00000508282 CBX7O95931 251 aa8.58□□□□□ -1.04
DHFR-204ENST00000508282 RACK1P63244 317 aaKnown RBP8.58□□□□□ -1.04
DHFR-204ENST00000508282 MFSD4AQ8N468 514 aa8.58□□□□□ -1.04
DHFR-204ENST00000508282 ATE1O95260 518 aa8.57□□□□□ -1.04
DHFR-204ENST00000508282 CLCN7P51798 805 aa8.57□□□□□ -1.04
DHFR-204ENST00000508282 EHMT1Q9H9B1 1298 aa8.57□□□□□ -1.04
DHFR-204ENST00000508282 ADGRE2Q9UHX3 823 aa8.57□□□□□ -1.04
DHFR-204ENST00000508282 DDX41Q9UJV9 622 aaKnown RBP8.57□□□□□ -1.04
DHFR-204ENST00000508282 FAM155AB1AL88 458 aaPredicted RBP8.56□□□□□ -1.04
DHFR-204ENST00000508282 CYP7A1P22680 504 aa8.56□□□□□ -1.04
DHFR-204ENST00000508282 ETV3P41162 512 aa8.56□□□□□ -1.04
DHFR-204ENST00000508282 CLCQ05315 142 aa8.56□□□□□ -1.04
DHFR-204ENST00000508282 SLITRK4Q8IW52 837 aa8.56□□□□□ -1.04
DHFR-204ENST00000508282 AGBL5Q8NDL9 886 aa8.56□□□□□ -1.04
DHFR-204ENST00000508282 COX4I2Q96KJ9 171 aa8.56□□□□□ -1.04
DHFR-204ENST00000508282 PITPNM2Q9BZ72 1349 aa8.55□□□□□ -1.04
DHFR-204ENST00000508282 SLC22A31A6NKX4 558 aa8.55□□□□□ -1.04
DHFR-204ENST00000508282 HDLBPQ00341 1268 aaKnown RBP8.55□□□□□ -1.04
DHFR-204ENST00000508282 CDKAL1Q5VV42 579 aa8.55□□□□□ -1.04
DHFR-204ENST00000508282 GK5Q6ZS86 529 aa8.55□□□□□ -1.04
DHFR-204ENST00000508282 REXO1Q8N1G1 1221 aaKnown RBP8.55□□□□□ -1.04
DHFR-204ENST00000508282 BAHD1Q8TBE0 780 aaPredicted RBP8.55□□□□□ -1.04
DHFR-204ENST00000508282 NKD1Q969G9 470 aa8.55□□□□□ -1.04
DHFR-204ENST00000508282 HSPA12BQ96MM6 686 aa8.55□□□□□ -1.04
DHFR-204ENST00000508282 ST14Q9Y5Y6 855 aa8.55□□□□□ -1.04
DHFR-204ENST00000508282 COL17A1Q9UMD9 1497 aaPredicted RBP8.54□□□□□ -1.04
DHFR-204ENST00000508282 FUT4P22083 530 aa8.54□□□□□ -1.04
DHFR-204ENST00000508282 MCM4P33991 863 aa8.54□□□□□ -1.04
DHFR-204ENST00000508282 KIR3DL1P43629 444 aa8.54□□□□□ -1.04
DHFR-204ENST00000508282 IRAK1P51617 712 aa8.54□□□□□ -1.04
DHFR-204ENST00000508282 TNK2Q07912 1038 aa8.54□□□□□ -1.04
DHFR-204ENST00000508282 CBLL1Q75N03 491 aa8.54□□□□□ -1.04
DHFR-204ENST00000508282 ASB11Q8WXH4 323 aa8.54□□□□□ -1.04
DHFR-204ENST00000508282 Q96M66 194 aa8.54□□□□□ -1.04
DHFR-204ENST00000508282 KIF2CQ99661 725 aa8.54□□□□□ -1.04
DHFR-204ENST00000508282 SEMA3GQ9NS98 782 aa8.54□□□□□ -1.04
DHFR-204ENST00000508282 GMIPQ9P107 970 aa8.54□□□□□ -1.04
DHFR-204ENST00000508282 ZNF165P49910 485 aa8.53□□□□□ -1.04
DHFR-204ENST00000508282 MLECQ14165 292 aa8.53□□□□□ -1.04
DHFR-204ENST00000508282 PLCL1Q15111 1095 aa8.53□□□□□ -1.04
DHFR-204ENST00000508282 ARSHQ5FYA8 562 aa8.53□□□□□ -1.04
DHFR-204ENST00000508282 C9orf131Q5VYM1 1079 aa8.53□□□□□ -1.04
DHFR-204ENST00000508282 PHACTR4Q8IZ21 702 aa8.53□□□□□ -1.04
DHFR-204ENST00000508282 CCDC74BQ96LY2 380 aa8.53□□□□□ -1.04
DHFR-204ENST00000508282 H3BS24 57 aa8.52□□□□□ -1.05
DHFR-204ENST00000508282 ANGEL2Q5VTE6 544 aaKnown RBP8.52□□□□□ -1.05
DHFR-204ENST00000508282 OVOS1Q6IE37 1185 aa8.52□□□□□ -1.05
DHFR-204ENST00000508282 NT5DC4Q86YG4 428 aa8.52□□□□□ -1.05
DHFR-204ENST00000508282 ZNF654Q8IZM8 581 aa8.52□□□□□ -1.05
DHFR-204ENST00000508282 ZNF428Q96B54 188 aa8.52□□□□□ -1.05
DHFR-204ENST00000508282 ANTXR1Q9H6X2 564 aa8.52□□□□□ -1.05
DHFR-204ENST00000508282 ATP13A1Q9HD20 1204 aa8.52□□□□□ -1.05
DHFR-204ENST00000508282 ADAMTS6Q9UKP5 1117 aa8.52□□□□□ -1.05
DHFR-204ENST00000508282 TNNI2P48788 182 aa8.51□□□□□ -1.05
DHFR-204ENST00000508282 IKZF1Q13422 519 aa8.51□□□□□ -1.05
DHFR-204ENST00000508282 ZNF792Q3KQV3 632 aa8.51□□□□□ -1.05
DHFR-204ENST00000508282 MCTP1Q6DN14 999 aa8.51□□□□□ -1.05
DHFR-204ENST00000508282 KREMEN1Q96MU8 473 aa8.51□□□□□ -1.05
DHFR-204ENST00000508282 MBNL3Q9NUK0 354 aaKnown RBP8.51□□□□□ -1.05
DHFR-204ENST00000508282 RGS13O14921 159 aa8.5□□□□□ -1.05
DHFR-204ENST00000508282 LRRN2O75325 713 aa8.5□□□□□ -1.05
DHFR-204ENST00000508282 UBOX5O94941 541 aa8.5□□□□□ -1.05
DHFR-204ENST00000508282 RAG1P15918 1043 aa8.5□□□□□ -1.05
DHFR-204ENST00000508282 CDCP2Q5VXM1 449 aa8.5□□□□□ -1.05
DHFR-204ENST00000508282 THAP5Q7Z6K1 395 aa8.5□□□□□ -1.05
DHFR-204ENST00000508282 PIWIL2Q8TC59 973 aaKnown RBP8.5□□□□□ -1.05
DHFR-204ENST00000508282 RNF141Q8WVD5 230 aa8.5□□□□□ -1.05
DHFR-204ENST00000508282 ATG4CQ96DT6 458 aa8.5□□□□□ -1.05
DHFR-204ENST00000508282 CNNM2Q9H8M5 875 aa8.5□□□□□ -1.05
DHFR-204ENST00000508282 MEIS3P2A8K0S8 358 aa8.49□□□□□ -1.05
DHFR-204ENST00000508282 TAL1P17542 331 aaPredicted RBP8.49□□□□□ -1.05
DHFR-204ENST00000508282 POLR2BP30876 1174 aaKnown RBP8.49□□□□□ -1.05
DHFR-204ENST00000508282 DTWD2Q8NBA8 298 aa8.49□□□□□ -1.05
DHFR-204ENST00000508282 TMEM40Q8WWA1 233 aa8.49□□□□□ -1.05
DHFR-204ENST00000508282 UBE2FQ969M7 185 aa8.49□□□□□ -1.05
DHFR-204ENST00000508282 VWCEQ96DN2 955 aa8.49□□□□□ -1.05
DHFR-204ENST00000508282 PRDM7Q9NQW5 492 aa8.49□□□□□ -1.05
DHFR-204ENST00000508282 ZSWIM5Q9P217 1185 aa8.49□□□□□ -1.05
DHFR-204ENST00000508282 WASH4PA8MWX3 477 aa8.48□□□□□ -1.05
DHFR-204ENST00000508282 RNASE1P07998 156 aaKnown RBP8.48□□□□□ -1.05
DHFR-204ENST00000508282 GBP1P32455 592 aa8.48□□□□□ -1.05
DHFR-204ENST00000508282 ZP2Q05996 745 aa8.48□□□□□ -1.05
DHFR-204ENST00000508282 PAK2Q13177 524 aa8.48□□□□□ -1.05
DHFR-204ENST00000508282 NLRC3Q7RTR2 1065 aa8.48□□□□□ -1.05
DHFR-204ENST00000508282 PI4K2BQ8TCG2 481 aa8.48□□□□□ -1.05
DHFR-204ENST00000508282 DUSP15Q9H1R2 295 aaPredicted RBP8.48□□□□□ -1.05
DHFR-204ENST00000508282 PODXL2Q9NZ53 605 aa8.48□□□□□ -1.05
DHFR-204ENST00000508282 ZNRF3Q9ULT6 936 aa8.48□□□□□ -1.05
DHFR-204ENST00000508282 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.48□□□□□ -1.05
DHFR-204ENST00000508282 LRRFIP1Q32MZ4 808 aaKnown RBP8.47□□□□□ -1.05
DHFR-204ENST00000508282 SLC23A3Q6PIS1 610 aa8.47□□□□□ -1.05
DHFR-204ENST00000508282 ASPNQ9BXN1 380 aa8.47□□□□□ -1.05
DHFR-204ENST00000508282 SRFP11831 508 aa8.46□□□□□ -1.06
DHFR-204ENST00000508282 NME1P15531 152 aaKnown RBP8.46□□□□□ -1.06
DHFR-204ENST00000508282 RAD51AP2Q09MP3 1159 aa8.46□□□□□ -1.06
DHFR-204ENST00000508282 GPR62Q9BZJ7 368 aa8.46□□□□□ -1.06
DHFR-204ENST00000508282 CARS2Q9HA77 564 aaKnown RBP8.46□□□□□ -1.06
DHFR-204ENST00000508282 LMCD1Q9NZU5 365 aa8.46□□□□□ -1.06
DHFR-204ENST00000508282 KCNH3Q9ULD8 1083 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms