RNA–Protein interactions for RNA: ENST00000508279.5

DDX41-209, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-209ENST00000508279 PTCH2Q9Y6C5 1203 aa11.25□□□□□ -0.61
DDX41-209ENST00000508279 ADGRA2Q96PE1 1338 aa11.25□□□□□ -0.61
DDX41-209ENST00000508279 SALL3Q9BXA9 1300 aa11.25□□□□□ -0.61
DDX41-209ENST00000508279 GSG1L2A8MUP6 293 aa11.24□□□□□ -0.61
DDX41-209ENST00000508279 BCRP11274 1271 aa11.24□□□□□ -0.61
DDX41-209ENST00000508279 AKR1B1P15121 316 aa11.24□□□□□ -0.61
DDX41-209ENST00000508279 CTGFP29279 349 aa11.24□□□□□ -0.61
DDX41-209ENST00000508279 CDK8P49336 464 aa11.24□□□□□ -0.61
DDX41-209ENST00000508279 FCGRTP55899 365 aa11.24□□□□□ -0.61
DDX41-209ENST00000508279 ATP2B2Q01814 1243 aa11.24□□□□□ -0.61
DDX41-209ENST00000508279 SH3D19Q5HYK7 790 aa11.24□□□□□ -0.61
DDX41-209ENST00000508279 CCDC129Q6ZRS4 1044 aa11.24□□□□□ -0.61
DDX41-209ENST00000508279 CLEC10AQ8IUN9 316 aa11.24□□□□□ -0.61
DDX41-209ENST00000508279 EVI5LQ96CN4 794 aa11.24□□□□□ -0.61
DDX41-209ENST00000508279 TRIM47Q96LD4 638 aa11.24□□□□□ -0.61
DDX41-209ENST00000508279 ARPP21Q9UBL0 812 aaPredicted RBP11.24□□□□□ -0.61
DDX41-209ENST00000508279 STAP2Q9UGK3 403 aa11.24□□□□□ -0.61
DDX41-209ENST00000508279 TAOK2Q9UL54 1235 aa11.24□□□□□ -0.61
DDX41-209ENST00000508279 RAD21O60216 631 aa11.23□□□□□ -0.61
DDX41-209ENST00000508279 PEX10O60683 326 aa11.23□□□□□ -0.61
DDX41-209ENST00000508279 GNAT2P19087 354 aa11.23□□□□□ -0.61
DDX41-209ENST00000508279 HOXD10P28358 340 aa11.23□□□□□ -0.61
DDX41-209ENST00000508279 GUCY1A2P33402 732 aa11.23□□□□□ -0.61
DDX41-209ENST00000508279 NUCB1Q02818 461 aa11.23□□□□□ -0.61
DDX41-209ENST00000508279 SLC9C1Q4G0N8 1177 aa11.23□□□□□ -0.61
DDX41-209ENST00000508279 ZMYM1Q5SVZ6 1142 aa11.23□□□□□ -0.61
DDX41-209ENST00000508279 SAMD1Q6SPF0 538 aaPredicted RBP11.23□□□□□ -0.61
DDX41-209ENST00000508279 RAET1EQ8TD07 263 aa11.23□□□□□ -0.61
DDX41-209ENST00000508279 PAGR1Q9BTK6 254 aa11.23□□□□□ -0.61
DDX41-209ENST00000508279 MKNK2Q9HBH9 465 aa11.23□□□□□ -0.61
DDX41-209ENST00000508279 EMILIN3Q9NT22 766 aa11.23□□□□□ -0.61
DDX41-209ENST00000508279 MYPNQ86TC9 1320 aa11.23□□□□□ -0.61
DDX41-209ENST00000508279 PATL2C9JE40 543 aaKnown RBP11.22□□□□□ -0.61
DDX41-209ENST00000508279 TNPO2O14787 897 aaKnown RBP11.22□□□□□ -0.61
DDX41-209ENST00000508279 USP14P54578 494 aa11.22□□□□□ -0.61
DDX41-209ENST00000508279 ICA1Q05084 483 aa11.22□□□□□ -0.61
DDX41-209ENST00000508279 TMEM179Q6ZVK1 233 aa11.22□□□□□ -0.61
DDX41-209ENST00000508279 C16orf86Q6ZW13 317 aa11.22□□□□□ -0.61
DDX41-209ENST00000508279 PLEKHM2Q8IWE5 1019 aa11.22□□□□□ -0.61
DDX41-209ENST00000508279 IFNL3Q8IZI9 196 aa11.22□□□□□ -0.61
DDX41-209ENST00000508279 SH3TC2Q8TF17 1288 aa11.22□□□□□ -0.61
DDX41-209ENST00000508279 P2RX7Q99572 595 aaKnown RBP11.22□□□□□ -0.61
DDX41-209ENST00000508279 NACAP1Q9BZK3 213 aa11.22□□□□□ -0.61
DDX41-209ENST00000508279 NAPBQ9H115 298 aa11.22□□□□□ -0.61
DDX41-209ENST00000508279 EPB41L4AQ9HCS5 686 aaPredicted RBP11.22□□□□□ -0.61
DDX41-209ENST00000508279 MYH4Q9Y623 1939 aa11.22□□□□□ -0.61
DDX41-209ENST00000508279 A0A1W2PRG0 241 aa11.21□□□□□ -0.61
DDX41-209ENST00000508279 PRDM1O75626 825 aa11.21□□□□□ -0.61
DDX41-209ENST00000508279 GNRH1P01148 92 aa11.21□□□□□ -0.61
DDX41-209ENST00000508279 GCLCP48506 637 aaPredicted RBP11.21□□□□□ -0.61
DDX41-209ENST00000508279 HERVK_113P62684 666 aa11.21□□□□□ -0.61
DDX41-209ENST00000508279 PRKCZQ05513 592 aa11.21□□□□□ -0.61
DDX41-209ENST00000508279 FAM110CQ1W6H9 321 aa11.21□□□□□ -0.61
DDX41-209ENST00000508279 SBK1Q52WX2 424 aa11.21□□□□□ -0.61
DDX41-209ENST00000508279 GIMAP6Q6P9H5 292 aa11.21□□□□□ -0.61
DDX41-209ENST00000508279 NBPF11Q86T75 865 aa11.21□□□□□ -0.61
DDX41-209ENST00000508279 CCAR1Q8IX12 1150 aaKnown RBP11.21□□□□□ -0.61
DDX41-209ENST00000508279 CCDC17Q96LX7 622 aa11.21□□□□□ -0.61
DDX41-209ENST00000508279 FAM227BQ96M60 508 aa11.21□□□□□ -0.61
DDX41-209ENST00000508279 KIAA1683Q9H0B3 1180 aa11.21□□□□□ -0.61
DDX41-209ENST00000508279 RPAP3Q9H6T3 665 aaPredicted RBP11.21□□□□□ -0.61
DDX41-209ENST00000508279 ARHGEF10LQ9HCE6 1279 aa11.21□□□□□ -0.61
DDX41-209ENST00000508279 BIN2Q9UBW5 565 aaPredicted RBP11.21□□□□□ -0.61
DDX41-209ENST00000508279 SRRDQ9UH36 339 aa11.21□□□□□ -0.61
DDX41-209ENST00000508279 GABRQQ9UN88 632 aa11.21□□□□□ -0.61
DDX41-209ENST00000508279 CENPFP49454 3210 aa11.2□□□□□ -0.62
DDX41-209ENST00000508279 KIAA0100Q14667 2235 aaKnown RBP11.2□□□□□ -0.62
DDX41-209ENST00000508279 USP17L15C9J2P7 530 aa11.2□□□□□ -0.62
DDX41-209ENST00000508279 USP17L13C9JLJ4 530 aa11.2□□□□□ -0.62
DDX41-209ENST00000508279 USP17L11C9JVI0 530 aa11.2□□□□□ -0.62
DDX41-209ENST00000508279 USP17L18D6R9N7 530 aa11.2□□□□□ -0.62
DDX41-209ENST00000508279 USP17L22D6RA61 530 aa11.2□□□□□ -0.62
DDX41-209ENST00000508279 USP17L17D6RBQ6 530 aa11.2□□□□□ -0.62
DDX41-209ENST00000508279 USP17L19D6RCP7 530 aa11.2□□□□□ -0.62
DDX41-209ENST00000508279 USP17L20D6RJB6 530 aa11.2□□□□□ -0.62
DDX41-209ENST00000508279 VCAM1P19320 739 aa11.2□□□□□ -0.62
DDX41-209ENST00000508279 HOXA7P31268 230 aaPredicted RBP11.2□□□□□ -0.62
DDX41-209ENST00000508279 MLLT1Q03111 559 aaPredicted RBP11.2□□□□□ -0.62
DDX41-209ENST00000508279 USP17L24Q0WX57 530 aa11.2□□□□□ -0.62
DDX41-209ENST00000508279 SPICE1Q8N0Z3 855 aa11.2□□□□□ -0.62
DDX41-209ENST00000508279 COA7Q96BR5 231 aa11.2□□□□□ -0.62
DDX41-209ENST00000508279 TANGO6Q9C0B7 1094 aa11.2□□□□□ -0.62
DDX41-209ENST00000508279 CWC22Q9HCG8 908 aaKnown RBP11.2□□□□□ -0.62
DDX41-209ENST00000508279 HTTP42858 3142 aa11.2□□□□□ -0.62
DDX41-209ENST00000508279 A0A0D9SFI3 127 aa11.19□□□□□ -0.62
DDX41-209ENST00000508279 EEF2P13639 858 aaKnown RBP11.19□□□□□ -0.62
DDX41-209ENST00000508279 PRMT2P55345 433 aa11.19□□□□□ -0.62
DDX41-209ENST00000508279 NMIQ13287 307 aaPredicted RBP11.19□□□□□ -0.62
DDX41-209ENST00000508279 MCMDC2Q4G0Z9 681 aa11.19□□□□□ -0.62
DDX41-209ENST00000508279 VPS53Q5VIR6 699 aa11.19□□□□□ -0.62
DDX41-209ENST00000508279 WDR78Q5VTH9 848 aa11.19□□□□□ -0.62
DDX41-209ENST00000508279 CATSPERGQ6ZRH7 1159 aa11.19□□□□□ -0.62
DDX41-209ENST00000508279 ZNF444Q8N0Y2 327 aaPredicted RBP11.19□□□□□ -0.62
DDX41-209ENST00000508279 GPRC5AQ8NFJ5 357 aa11.19□□□□□ -0.62
DDX41-209ENST00000508279 C12orf42Q96LP6 360 aa11.19□□□□□ -0.62
DDX41-209ENST00000508279 TMEM106CQ9BVX2 250 aa11.19□□□□□ -0.62
DDX41-209ENST00000508279 SH2D4AQ9H788 454 aa11.19□□□□□ -0.62
DDX41-209ENST00000508279 TXNRD2Q9NNW7 524 aa11.19□□□□□ -0.62
DDX41-209ENST00000508279 HELLSQ9NRZ9 838 aa11.19□□□□□ -0.62
DDX41-209ENST00000508279 POTEFA5A3E0 1075 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms