RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-223ENST00000508249 CCDC102BQ68D86 513 aa11.28□□□□□ -0.6
UBE2D3-223ENST00000508249 YTHDC1Q96MU7 727 aaKnown RBP11.28□□□□□ -0.6
UBE2D3-223ENST00000508249 SIL1Q9H173 461 aa11.28□□□□□ -0.6
UBE2D3-223ENST00000508249 GPR108Q9NPR9 543 aa11.28□□□□□ -0.6
UBE2D3-223ENST00000508249 PA2G4Q9UQ80 394 aaKnown RBP11.28□□□□□ -0.6
UBE2D3-223ENST00000508249 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.28□□□□□ -0.6
UBE2D3-223ENST00000508249 TCF20Q9UGU0 1960 aaKnown RBP11.28□□□□□ -0.6
UBE2D3-223ENST00000508249 SMCHD1A6NHR9 2005 aa11.28□□□□□ -0.6
UBE2D3-223ENST00000508249 MYH1P12882 1939 aa11.27□□□□□ -0.6
UBE2D3-223ENST00000508249 PNMA6EA0A0J9YXQ4 647 aa11.27□□□□□ -0.61
UBE2D3-223ENST00000508249 HOXC6P09630 235 aa11.27□□□□□ -0.61
UBE2D3-223ENST00000508249 TRIM60Q495X7 471 aa11.27□□□□□ -0.61
UBE2D3-223ENST00000508249 CEP85Q6P2H3 762 aa11.27□□□□□ -0.61
UBE2D3-223ENST00000508249 PLEKHH3Q7Z736 793 aa11.27□□□□□ -0.61
UBE2D3-223ENST00000508249 DZIP1Q86YF9 867 aaKnown RBP11.27□□□□□ -0.61
UBE2D3-223ENST00000508249 ERC1Q8IUD2 1116 aa11.27□□□□□ -0.61
UBE2D3-223ENST00000508249 NPLOC4Q8TAT6 608 aa11.27□□□□□ -0.61
UBE2D3-223ENST00000508249 EMILIN3Q9NT22 766 aa11.27□□□□□ -0.61
UBE2D3-223ENST00000508249 ZBTB40Q9NUA8 1239 aa11.27□□□□□ -0.61
UBE2D3-223ENST00000508249 ATP11BQ9Y2G3 1177 aa11.27□□□□□ -0.61
UBE2D3-223ENST00000508249 COG6Q9Y2V7 657 aa11.27□□□□□ -0.61
UBE2D3-223ENST00000508249 NOP58Q9Y2X3 529 aaKnown RBP11.27□□□□□ -0.61
UBE2D3-223ENST00000508249 IGSF3O75054 1194 aa11.26□□□□□ -0.61
UBE2D3-223ENST00000508249 CYP2C19P33261 490 aa11.26□□□□□ -0.61
UBE2D3-223ENST00000508249 OS9Q13438 667 aaPredicted RBP11.26□□□□□ -0.61
UBE2D3-223ENST00000508249 GRB14Q14449 540 aa11.26□□□□□ -0.61
UBE2D3-223ENST00000508249 GJC2Q5T442 439 aaPredicted RBP11.26□□□□□ -0.61
UBE2D3-223ENST00000508249 PI16Q6UXB8 463 aa11.26□□□□□ -0.61
UBE2D3-223ENST00000508249 SLC39A5Q6ZMH5 540 aa11.26□□□□□ -0.61
UBE2D3-223ENST00000508249 METTL16Q86W50 562 aaKnown RBP11.26□□□□□ -0.61
UBE2D3-223ENST00000508249 NDUFB9Q9Y6M9 179 aa11.26□□□□□ -0.61
UBE2D3-223ENST00000508249 ZNFX1Q9P2E3 1918 aaKnown RBP11.26□□□□□ -0.61
UBE2D3-223ENST00000508249 COL11A1P12107 1806 aaPredicted RBP11.25□□□□□ -0.61
UBE2D3-223ENST00000508249 WDFY4Q6ZS81 3184 aa11.25□□□□□ -0.61
UBE2D3-223ENST00000508249 SURF6O75683 361 aaKnown RBP11.25□□□□□ -0.61
UBE2D3-223ENST00000508249 RRP1P56182 461 aaKnown RBP11.25□□□□□ -0.61
UBE2D3-223ENST00000508249 AAMPQ13685 434 aa11.25□□□□□ -0.61
UBE2D3-223ENST00000508249 ZGPATQ8N5A5 531 aaKnown RBP11.25□□□□□ -0.61
UBE2D3-223ENST00000508249 NSUN4Q96CB9 384 aaKnown RBP11.25□□□□□ -0.61
UBE2D3-223ENST00000508249 PAGR1Q9BTK6 254 aa11.25□□□□□ -0.61
UBE2D3-223ENST00000508249 HERC5Q9UII4 1024 aaKnown RBP11.25□□□□□ -0.61
UBE2D3-223ENST00000508249 MYO9BQ13459 2157 aa11.24□□□□□ -0.61
UBE2D3-223ENST00000508249 A0A1B0GUL7 405 aa11.24□□□□□ -0.61
UBE2D3-223ENST00000508249 MSCO60682 206 aa11.24□□□□□ -0.61
UBE2D3-223ENST00000508249 PTPREP23469 700 aa11.24□□□□□ -0.61
UBE2D3-223ENST00000508249 DNAJB2P25686 324 aa11.24□□□□□ -0.61
UBE2D3-223ENST00000508249 MAP3K12Q12852 859 aa11.24□□□□□ -0.61
UBE2D3-223ENST00000508249 C1orf53Q5VUE5 145 aa11.24□□□□□ -0.61
UBE2D3-223ENST00000508249 ADAMTS19Q8TE59 1207 aa11.24□□□□□ -0.61
UBE2D3-223ENST00000508249 EDC3Q96F86 508 aaKnown RBP11.24□□□□□ -0.61
UBE2D3-223ENST00000508249 C1orf115Q9H7X2 142 aa11.24□□□□□ -0.61
UBE2D3-223ENST00000508249 AS3MTQ9HBK9 375 aa11.24□□□□□ -0.61
UBE2D3-223ENST00000508249 PRDM5Q9NQX1 630 aaPredicted RBP11.24□□□□□ -0.61
UBE2D3-223ENST00000508249 BTBD7Q9P203 1132 aa11.24□□□□□ -0.61
UBE2D3-223ENST00000508249 ABCF2Q9UG63 623 aa11.24□□□□□ -0.61
UBE2D3-223ENST00000508249 ZBTB21Q9ULJ3 1066 aa11.24□□□□□ -0.61
UBE2D3-223ENST00000508249 SYNGAP1Q96PV0 1343 aa11.24□□□□□ -0.61
UBE2D3-223ENST00000508249 SLC15A5A6NIM6 579 aa11.23□□□□□ -0.61
UBE2D3-223ENST00000508249 GDF11O95390 407 aa11.23□□□□□ -0.61
UBE2D3-223ENST00000508249 UQCRFS1P1P0C7P4 283 aa11.23□□□□□ -0.61
UBE2D3-223ENST00000508249 TFCP2Q12800 502 aa11.23□□□□□ -0.61
UBE2D3-223ENST00000508249 ANO1Q5XXA6 986 aa11.23□□□□□ -0.61
UBE2D3-223ENST00000508249 SH3RF3Q8TEJ3 882 aaPredicted RBP11.23□□□□□ -0.61
UBE2D3-223ENST00000508249 FAM122AQ96E09 287 aa11.23□□□□□ -0.61
UBE2D3-223ENST00000508249 C12orf42Q96LP6 360 aa11.23□□□□□ -0.61
UBE2D3-223ENST00000508249 RNPC3Q96LT9 517 aaKnown RBP11.23□□□□□ -0.61
UBE2D3-223ENST00000508249 ASB2Q96Q27 587 aa11.23□□□□□ -0.61
UBE2D3-223ENST00000508249 PRKAG2Q9UGJ0 569 aa11.23□□□□□ -0.61
UBE2D3-223ENST00000508249 LRRC37A2A6NM11 1700 aa11.22□□□□□ -0.61
UBE2D3-223ENST00000508249 C19orf81C9J6K1 198 aa11.22□□□□□ -0.61
UBE2D3-223ENST00000508249 USP17L10C9JJH3 530 aa11.22□□□□□ -0.61
UBE2D3-223ENST00000508249 RAB11FIP3O75154 756 aa11.22□□□□□ -0.61
UBE2D3-223ENST00000508249 ASNSP08243 561 aa11.22□□□□□ -0.61
UBE2D3-223ENST00000508249 ADGRE1Q14246 886 aa11.22□□□□□ -0.61
UBE2D3-223ENST00000508249 TNNI3KQ59H18 835 aa11.22□□□□□ -0.61
UBE2D3-223ENST00000508249 GORABQ5T7V8 394 aa11.22□□□□□ -0.61
UBE2D3-223ENST00000508249 MFSD14CQ5VZR4 134 aa11.22□□□□□ -0.61
UBE2D3-223ENST00000508249 LBX2Q6XYB7 198 aa11.22□□□□□ -0.61
UBE2D3-223ENST00000508249 ADGRA1Q86SQ6 560 aa11.22□□□□□ -0.61
UBE2D3-223ENST00000508249 GTF3C2Q8WUA4 911 aaPredicted RBP11.22□□□□□ -0.61
UBE2D3-223ENST00000508249 ATXN2LQ8WWM7 1075 aaKnown RBP11.22□□□□□ -0.61
UBE2D3-223ENST00000508249 XAGE2Q96GT9 111 aa11.22□□□□□ -0.61
UBE2D3-223ENST00000508249 TMOD4Q9NZQ9 345 aa11.22□□□□□ -0.61
UBE2D3-223ENST00000508249 HMG20BQ9P0W2 317 aa11.22□□□□□ -0.61
UBE2D3-223ENST00000508249 RABGAP1Q9Y3P9 1069 aa11.22□□□□□ -0.61
UBE2D3-223ENST00000508249 FPGT-TNNI3KV9GXZ4 949 aa11.22□□□□□ -0.61
UBE2D3-223ENST00000508249 NAV1Q8NEY1 1877 aa11.21□□□□□ -0.61
UBE2D3-223ENST00000508249 ROBO3Q96MS0 1386 aa11.21□□□□□ -0.61
UBE2D3-223ENST00000508249 FLT1P17948 1338 aa11.21□□□□□ -0.61
UBE2D3-223ENST00000508249 KIAA0355O15063 1070 aa11.21□□□□□ -0.61
UBE2D3-223ENST00000508249 MAP4K4O95819 1239 aaPredicted RBP11.21□□□□□ -0.61
UBE2D3-223ENST00000508249 PBX2P40425 430 aa11.21□□□□□ -0.61
UBE2D3-223ENST00000508249 ADCYAP1R1P41586 468 aa11.21□□□□□ -0.61
UBE2D3-223ENST00000508249 TIMM10P62072 90 aa11.21□□□□□ -0.61
UBE2D3-223ENST00000508249 TLE2Q04725 743 aa11.21□□□□□ -0.61
UBE2D3-223ENST00000508249 LRRC41Q15345 812 aa11.21□□□□□ -0.61
UBE2D3-223ENST00000508249 FAM47AQ5JRC9 791 aa11.21□□□□□ -0.61
UBE2D3-223ENST00000508249 CCDC158Q5M9N0 1113 aa11.21□□□□□ -0.61
UBE2D3-223ENST00000508249 SPTY2D1Q68D10 685 aaPredicted RBP11.21□□□□□ -0.61
UBE2D3-223ENST00000508249 TBC1D9Q6ZT07 1266 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms