RNA–Protein interactions for RNA: ENST00000507528.5

PDCD6-206, Transcript of programmed cell death 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDCD6, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-206ENST00000507528 USP17L18D6R9N7 530 aa23.3■■□□□ 1.32
PDCD6-206ENST00000507528 USP17L22D6RA61 530 aa23.3■■□□□ 1.32
PDCD6-206ENST00000507528 USP17L17D6RBQ6 530 aa23.3■■□□□ 1.32
PDCD6-206ENST00000507528 USP17L19D6RCP7 530 aa23.3■■□□□ 1.32
PDCD6-206ENST00000507528 USP17L20D6RJB6 530 aa23.3■■□□□ 1.32
PDCD6-206ENST00000507528 ZAP70P43403 619 aa23.3■■□□□ 1.32
PDCD6-206ENST00000507528 USP17L24Q0WX57 530 aa23.3■■□□□ 1.32
PDCD6-206ENST00000507528 PIH1D3Q9NQM4 214 aaKnown RBP23.3■■□□□ 1.32
PDCD6-206ENST00000507528 FLRT1Q9NZU1 646 aa23.3■■□□□ 1.32
PDCD6-206ENST00000507528 EYSQ5T1H1 3165 aa23.3■■□□□ 1.32
PDCD6-206ENST00000507528 GLRX3O76003 335 aaKnown RBP23.29■■□□□ 1.32
PDCD6-206ENST00000507528 CCNA1P78396 465 aa23.29■■□□□ 1.32
PDCD6-206ENST00000507528 LBX2Q6XYB7 198 aa23.29■■□□□ 1.32
PDCD6-206ENST00000507528 CATSPERGQ6ZRH7 1159 aa23.29■■□□□ 1.32
PDCD6-206ENST00000507528 LTBP2Q14767 1821 aa23.29■■□□□ 1.32
PDCD6-206ENST00000507528 SLC15A5A6NIM6 579 aa23.28■■□□□ 1.32
PDCD6-206ENST00000507528 POTEB2H3BUK9 544 aa23.28■■□□□ 1.32
PDCD6-206ENST00000507528 HOXC6P09630 235 aa23.28■■□□□ 1.32
PDCD6-206ENST00000507528 PTPREP23469 700 aa23.28■■□□□ 1.32
PDCD6-206ENST00000507528 MFSD14CQ5VZR4 134 aa23.28■■□□□ 1.32
PDCD6-206ENST00000507528 FAM109BQ6ICB4 259 aaPredicted RBP23.28■■□□□ 1.32
PDCD6-206ENST00000507528 SSH3Q8TE77 659 aa23.28■■□□□ 1.32
PDCD6-206ENST00000507528 KIAA1683Q9H0B3 1180 aa23.28■■□□□ 1.32
PDCD6-206ENST00000507528 EHD4Q9H223 541 aa23.28■■□□□ 1.32
PDCD6-206ENST00000507528 CWC22Q9HCG8 908 aaKnown RBP23.28■■□□□ 1.32
PDCD6-206ENST00000507528 CYP7A1P22680 504 aa23.27■■□□□ 1.32
PDCD6-206ENST00000507528 USP14P54578 494 aa23.27■■□□□ 1.32
PDCD6-206ENST00000507528 ZYXQ15942 572 aaKnown RBP23.27■■□□□ 1.32
PDCD6-206ENST00000507528 FEZ1Q99689 392 aa23.27■■□□□ 1.32
PDCD6-206ENST00000507528 SENP6Q9GZR1 1112 aaPredicted RBP23.27■■□□□ 1.32
PDCD6-206ENST00000507528 DDX20Q9UHI6 824 aaKnown RBP23.27■■□□□ 1.32
PDCD6-206ENST00000507528 SERPINB13Q9UIV8 391 aa23.27■■□□□ 1.32
PDCD6-206ENST00000507528 NDUFB9Q9Y6M9 179 aa23.27■■□□□ 1.32
PDCD6-206ENST00000507528 RLFQ13129 1914 aa23.27■■□□□ 1.32
PDCD6-206ENST00000507528 MSCO60682 206 aa23.26■■□□□ 1.31
PDCD6-206ENST00000507528 IGHA2P01877 340 aa23.26■■□□□ 1.31
PDCD6-206ENST00000507528 VCAM1P19320 739 aa23.26■■□□□ 1.31
PDCD6-206ENST00000507528 GRB14Q14449 540 aa23.26■■□□□ 1.31
PDCD6-206ENST00000507528 CERS3Q8IU89 383 aa23.26■■□□□ 1.31
PDCD6-206ENST00000507528 LPAR1Q92633 364 aa23.26■■□□□ 1.31
PDCD6-206ENST00000507528 CLUAP1Q96AJ1 413 aa23.26■■□□□ 1.31
PDCD6-206ENST00000507528 BTBD7Q9P203 1132 aa23.26■■□□□ 1.31
PDCD6-206ENST00000507528 DBNLQ9UJU6 430 aaKnown RBP23.26■■□□□ 1.31
PDCD6-206ENST00000507528 ZNF236Q9UL36 1845 aa23.26■■□□□ 1.31
PDCD6-206ENST00000507528 VCANP13611 3396 aa23.25■■□□□ 1.31
PDCD6-206ENST00000507528 BCAR3O75815 825 aa23.25■■□□□ 1.31
PDCD6-206ENST00000507528 ATP8B2P98198 1209 aa23.25■■□□□ 1.31
PDCD6-206ENST00000507528 MIGA1Q8NAN2 632 aa23.25■■□□□ 1.31
PDCD6-206ENST00000507528 FRAT1Q92837 279 aaPredicted RBP23.25■■□□□ 1.31
PDCD6-206ENST00000507528 DNM1LO00429 736 aa23.24■■□□□ 1.31
PDCD6-206ENST00000507528 USP5P45974 858 aa23.24■■□□□ 1.31
PDCD6-206ENST00000507528 OS9Q13438 667 aaPredicted RBP23.24■■□□□ 1.31
PDCD6-206ENST00000507528 RAB3GAP1Q15042 981 aa23.24■■□□□ 1.31
PDCD6-206ENST00000507528 CERKLQ49MI3 558 aaPredicted RBP23.24■■□□□ 1.31
PDCD6-206ENST00000507528 WDR78Q5VTH9 848 aa23.24■■□□□ 1.31
PDCD6-206ENST00000507528 TMEM57Q8N5G2 664 aa23.24■■□□□ 1.31
PDCD6-206ENST00000507528 NPLOC4Q8TAT6 608 aa23.24■■□□□ 1.31
PDCD6-206ENST00000507528 ACER1Q8TDN7 264 aa23.24■■□□□ 1.31
PDCD6-206ENST00000507528 GUCD1Q96NT3 240 aa23.24■■□□□ 1.31
PDCD6-206ENST00000507528 SPDYE16A6NNV3 312 aaPredicted RBP23.23■■□□□ 1.31
PDCD6-206ENST00000507528 SURF6O75683 361 aaKnown RBP23.23■■□□□ 1.31
PDCD6-206ENST00000507528 ATP2B2Q01814 1243 aa23.23■■□□□ 1.31
PDCD6-206ENST00000507528 ABCB5Q2M3G0 1257 aa23.23■■□□□ 1.31
PDCD6-206ENST00000507528 LBHD1Q9BQE6 289 aaPredicted RBP23.23■■□□□ 1.31
PDCD6-206ENST00000507528 TLR7Q9NYK1 1049 aaKnown RBP23.23■■□□□ 1.31
PDCD6-206ENST00000507528 NOP58Q9Y2X3 529 aaKnown RBP23.23■■□□□ 1.31
PDCD6-206ENST00000507528 IVNS1ABPQ9Y6Y0 642 aa23.23■■□□□ 1.31
PDCD6-206ENST00000507528 A0A0G2JMZ2 1700 aa23.22■■□□□ 1.31
PDCD6-206ENST00000507528 IDH1O75874 414 aaKnown RBP23.22■■□□□ 1.31
PDCD6-206ENST00000507528 CYP2C19P33261 490 aa23.22■■□□□ 1.31
PDCD6-206ENST00000507528 TTC6Q86TZ1 520 aa23.22■■□□□ 1.31
PDCD6-206ENST00000507528 TRPV1Q8NER1 839 aa23.22■■□□□ 1.31
PDCD6-206ENST00000507528 COL25A1Q9BXS0 654 aaPredicted RBP23.22■■□□□ 1.31
PDCD6-206ENST00000507528 NAV1Q8NEY1 1877 aa23.22■■□□□ 1.31
PDCD6-206ENST00000507528 CYBAP13498 195 aa23.21■■□□□ 1.31
PDCD6-206ENST00000507528 CNGA1P29973 690 aa23.21■■□□□ 1.31
PDCD6-206ENST00000507528 SHMT1P34896 483 aa23.21■■□□□ 1.31
PDCD6-206ENST00000507528 ATN1P54259 1190 aaPredicted RBP23.21■■□□□ 1.31
PDCD6-206ENST00000507528 TMED8Q6PL24 325 aaPredicted RBP23.21■■□□□ 1.31
PDCD6-206ENST00000507528 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.21■■□□□ 1.312e-10■■■■■ 38.3
PDCD6-206ENST00000507528 MAGEB6Q8N7X4 407 aa23.21■■□□□ 1.31
PDCD6-206ENST00000507528 EAF2Q96CJ1 260 aaPredicted RBP23.21■■□□□ 1.31
PDCD6-206ENST00000507528 RPAP3Q9H6T3 665 aaPredicted RBP23.21■■□□□ 1.31
PDCD6-206ENST00000507528 ZBED9Q6R2W3 1325 aa23.21■■□□□ 1.31
PDCD6-206ENST00000507528 GUCY1A2P33402 732 aa23.2■■□□□ 1.3
PDCD6-206ENST00000507528 CCDC8Q9H0W5 538 aaPredicted RBP23.2■■□□□ 1.3
PDCD6-206ENST00000507528 CABP5Q9NP86 173 aa23.2■■□□□ 1.3
PDCD6-206ENST00000507528 CDH23Q9H251 3354 aa23.2■■□□□ 1.3
PDCD6-206ENST00000507528 PRUNE2Q8WUY3 3088 aa23.2■■□□□ 1.3
PDCD6-206ENST00000507528 PLCD1P51178 756 aa23.19■■□□□ 1.3
PDCD6-206ENST00000507528 RTP1P59025 263 aa23.19■■□□□ 1.3
PDCD6-206ENST00000507528 OLFML2BQ68BL8 750 aa23.18■■□□□ 1.3
PDCD6-206ENST00000507528 RIOK1Q9BRS2 568 aaKnown RBP23.18■■□□□ 1.3
PDCD6-206ENST00000507528 ANTXR1Q9H6X2 564 aa23.18■■□□□ 1.3
PDCD6-206ENST00000507528 PRKAG2Q9UGJ0 569 aa23.18■■□□□ 1.3
PDCD6-206ENST00000507528 SPTBN5Q9NRC6 3674 aaKnown RBP23.18■■□□□ 1.3
PDCD6-206ENST00000507528 STRNO43815 780 aa23.17■■□□□ 1.3
PDCD6-206ENST00000507528 GABPAQ06546 454 aa23.17■■□□□ 1.3
PDCD6-206ENST00000507528 MAP3K12Q12852 859 aa23.17■■□□□ 1.3
PDCD6-206ENST00000507528 GJC2Q5T442 439 aaPredicted RBP23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms