RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-222ENST00000507459 GIMAP6Q6P9H5 292 aa16.93■□□□□ 0.3
CCHCR1-222ENST00000507459 CCDC129Q6ZRS4 1044 aa16.93■□□□□ 0.3
CCHCR1-222ENST00000507459 C16orf86Q6ZW13 317 aa16.93■□□□□ 0.3
CCHCR1-222ENST00000507459 ANKRD13CQ8N6S4 541 aa16.93■□□□□ 0.3
CCHCR1-222ENST00000507459 EPB41L4AQ9HCS5 686 aaPredicted RBP16.93■□□□□ 0.3
CCHCR1-222ENST00000507459 EMILIN3Q9NT22 766 aa16.93■□□□□ 0.3
CCHCR1-222ENST00000507459 ZSWIM8A7E2V4 1837 aa16.92■□□□□ 0.3
CCHCR1-222ENST00000507459 SBK1Q52WX2 424 aa16.92■□□□□ 0.3
CCHCR1-222ENST00000507459 TMEM179Q6ZVK1 233 aa16.92■□□□□ 0.3
CCHCR1-222ENST00000507459 IFNL3Q8IZI9 196 aa16.92■□□□□ 0.3
CCHCR1-222ENST00000507459 TRIM47Q96LD4 638 aa16.92■□□□□ 0.3
CCHCR1-222ENST00000507459 NACAP1Q9BZK3 213 aa16.92■□□□□ 0.3
CCHCR1-222ENST00000507459 LOC285556D6RIA3 1793 aa16.92■□□□□ 0.3
CCHCR1-222ENST00000507459 USP14P54578 494 aa16.91■□□□□ 0.3
CCHCR1-222ENST00000507459 SOX10P56693 466 aa16.91■□□□□ 0.3
CCHCR1-222ENST00000507459 CLEC10AQ8IUN9 316 aa16.91■□□□□ 0.3
CCHCR1-222ENST00000507459 CCDC17Q96LX7 622 aa16.91■□□□□ 0.3
CCHCR1-222ENST00000507459 FAM227BQ96M60 508 aa16.91■□□□□ 0.3
CCHCR1-222ENST00000507459 P2RX7Q99572 595 aaKnown RBP16.91■□□□□ 0.3
CCHCR1-222ENST00000507459 MKNK2Q9HBH9 465 aa16.91■□□□□ 0.3
CCHCR1-222ENST00000507459 TAOK2Q9UL54 1235 aa16.91■□□□□ 0.3
CCHCR1-222ENST00000507459 PTCH2Q9Y6C5 1203 aa16.91■□□□□ 0.3
CCHCR1-222ENST00000507459 MYH8P13535 1937 aa16.9■□□□□ 0.3
CCHCR1-222ENST00000507459 HOXA7P31268 230 aaPredicted RBP16.9■□□□□ 0.3
CCHCR1-222ENST00000507459 GCLCP48506 637 aaPredicted RBP16.9■□□□□ 0.3
CCHCR1-222ENST00000507459 FCGRTP55899 365 aa16.9■□□□□ 0.3
CCHCR1-222ENST00000507459 KIAA1683Q9H0B3 1180 aa16.9■□□□□ 0.3
CCHCR1-222ENST00000507459 NAPBQ9H115 298 aa16.9■□□□□ 0.3
CCHCR1-222ENST00000507459 OSBPL3Q9H4L5 887 aa16.9■□□□□ 0.3
CCHCR1-222ENST00000507459 A0A1W2PRG0 241 aa16.89■□□□□ 0.29
CCHCR1-222ENST00000507459 GNRH1P01148 92 aa16.89■□□□□ 0.29
CCHCR1-222ENST00000507459 HOXD10P28358 340 aa16.89■□□□□ 0.29
CCHCR1-222ENST00000507459 ATP2B2Q01814 1243 aa16.89■□□□□ 0.29
CCHCR1-222ENST00000507459 ICA1Q05084 483 aa16.89■□□□□ 0.29
CCHCR1-222ENST00000507459 C12orf42Q96LP6 360 aa16.89■□□□□ 0.29
CCHCR1-222ENST00000507459 HELLSQ9NRZ9 838 aa16.89■□□□□ 0.29
CCHCR1-222ENST00000507459 A0A0D9SFI3 127 aa16.88■□□□□ 0.29
CCHCR1-222ENST00000507459 USP17L15C9J2P7 530 aa16.88■□□□□ 0.29
CCHCR1-222ENST00000507459 USP17L13C9JLJ4 530 aa16.88■□□□□ 0.29
CCHCR1-222ENST00000507459 USP17L11C9JVI0 530 aa16.88■□□□□ 0.29
CCHCR1-222ENST00000507459 USP17L18D6R9N7 530 aa16.88■□□□□ 0.29
CCHCR1-222ENST00000507459 USP17L22D6RA61 530 aa16.88■□□□□ 0.29
CCHCR1-222ENST00000507459 USP17L17D6RBQ6 530 aa16.88■□□□□ 0.29
CCHCR1-222ENST00000507459 USP17L19D6RCP7 530 aa16.88■□□□□ 0.29
CCHCR1-222ENST00000507459 USP17L20D6RJB6 530 aa16.88■□□□□ 0.29
CCHCR1-222ENST00000507459 PEX10O60683 326 aa16.88■□□□□ 0.29
CCHCR1-222ENST00000507459 PRDM1O75626 825 aa16.88■□□□□ 0.29
CCHCR1-222ENST00000507459 VCAM1P19320 739 aa16.88■□□□□ 0.29
CCHCR1-222ENST00000507459 PDE4AP27815 886 aa16.88■□□□□ 0.29
CCHCR1-222ENST00000507459 HERVK_113P62684 666 aa16.88■□□□□ 0.29
CCHCR1-222ENST00000507459 USP17L24Q0WX57 530 aa16.88■□□□□ 0.29
CCHCR1-222ENST00000507459 NMIQ13287 307 aaPredicted RBP16.88■□□□□ 0.29
CCHCR1-222ENST00000507459 FAM110CQ1W6H9 321 aa16.88■□□□□ 0.29
CCHCR1-222ENST00000507459 MCMDC2Q4G0Z9 681 aa16.88■□□□□ 0.29
CCHCR1-222ENST00000507459 VPS53Q5VIR6 699 aa16.88■□□□□ 0.29
CCHCR1-222ENST00000507459 ARHGEF10LQ9HCE6 1279 aa16.88■□□□□ 0.29
CCHCR1-222ENST00000507459 SRRDQ9UH36 339 aa16.88■□□□□ 0.29
CCHCR1-222ENST00000507459 MYPNQ86TC9 1320 aa16.88■□□□□ 0.29
CCHCR1-222ENST00000507459 TNPO2O14787 897 aaKnown RBP16.87■□□□□ 0.29
CCHCR1-222ENST00000507459 SDSP20132 328 aa16.87■□□□□ 0.29
CCHCR1-222ENST00000507459 RASA1P20936 1047 aa16.87■□□□□ 0.29
CCHCR1-222ENST00000507459 PRMT2P55345 433 aa16.87■□□□□ 0.29
CCHCR1-222ENST00000507459 SLC9C1Q4G0N8 1177 aa16.87■□□□□ 0.29
CCHCR1-222ENST00000507459 SIAH1Q8IUQ4 282 aa16.87■□□□□ 0.29
CCHCR1-222ENST00000507459 ZNF444Q8N0Y2 327 aaPredicted RBP16.87■□□□□ 0.29
CCHCR1-222ENST00000507459 RAET1EQ8TD07 263 aa16.87■□□□□ 0.29
CCHCR1-222ENST00000507459 PAGR1Q9BTK6 254 aa16.87■□□□□ 0.29
CCHCR1-222ENST00000507459 RPAP3Q9H6T3 665 aaPredicted RBP16.87■□□□□ 0.29
CCHCR1-222ENST00000507459 MYCP01106 439 aaPredicted RBP16.86■□□□□ 0.29
CCHCR1-222ENST00000507459 EEF2P13639 858 aaKnown RBP16.86■□□□□ 0.29
CCHCR1-222ENST00000507459 PRKCZQ05513 592 aa16.86■□□□□ 0.29
CCHCR1-222ENST00000507459 PPARAQ07869 468 aa16.86■□□□□ 0.29
CCHCR1-222ENST00000507459 CATSPERGQ6ZRH7 1159 aa16.86■□□□□ 0.29
CCHCR1-222ENST00000507459 NBPF11Q86T75 865 aa16.86■□□□□ 0.29
CCHCR1-222ENST00000507459 SH3TC2Q8TF17 1288 aa16.86■□□□□ 0.29
CCHCR1-222ENST00000507459 KANSL2Q9H9L4 492 aa16.86■□□□□ 0.29
CCHCR1-222ENST00000507459 ZNF287Q9HBT7 754 aa16.86■□□□□ 0.29
CCHCR1-222ENST00000507459 GABRQQ9UN88 632 aa16.86■□□□□ 0.29
CCHCR1-222ENST00000507459 HTTP42858 3142 aa16.86■□□□□ 0.29
CCHCR1-222ENST00000507459 ROBO3Q96MS0 1386 aa16.86■□□□□ 0.29
CCHCR1-222ENST00000507459 CENPFP49454 3210 aa16.85■□□□□ 0.29
CCHCR1-222ENST00000507459 FOXP2O15409 715 aa16.85■□□□□ 0.29
CCHCR1-222ENST00000507459 RAD21O60216 631 aa16.85■□□□□ 0.29
CCHCR1-222ENST00000507459 SLC3A2P08195 630 aaKnown RBP16.85■□□□□ 0.29
CCHCR1-222ENST00000507459 KIAA1755Q5JYT7 1200 aa16.85■□□□□ 0.29
CCHCR1-222ENST00000507459 ZNF589Q86UQ0 364 aaPredicted RBP16.85■□□□□ 0.29
CCHCR1-222ENST00000507459 TICAM2Q86XR7 235 aa16.85■□□□□ 0.29
CCHCR1-222ENST00000507459 SPICE1Q8N0Z3 855 aa16.85■□□□□ 0.29
CCHCR1-222ENST00000507459 COA7Q96BR5 231 aa16.85■□□□□ 0.29
CCHCR1-222ENST00000507459 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.85■□□□□ 0.29
CCHCR1-222ENST00000507459 SH2D4AQ9H788 454 aa16.85■□□□□ 0.29
CCHCR1-222ENST00000507459 TXNRD2Q9NNW7 524 aa16.85■□□□□ 0.29
CCHCR1-222ENST00000507459 RBPJLQ9UBG7 517 aa16.85■□□□□ 0.29
CCHCR1-222ENST00000507459 TMX2Q9Y320 296 aa16.85■□□□□ 0.29
CCHCR1-222ENST00000507459 MGAMO43451 1857 aa16.84■□□□□ 0.29
CCHCR1-222ENST00000507459 CTDSPL2Q05D32 466 aa16.84■□□□□ 0.29
CCHCR1-222ENST00000507459 PDE4BQ07343 736 aa16.84■□□□□ 0.29
CCHCR1-222ENST00000507459 CWC27Q6UX04 472 aaKnown RBP16.84■□□□□ 0.29
CCHCR1-222ENST00000507459 GPRC5AQ8NFJ5 357 aa16.84■□□□□ 0.29
CCHCR1-222ENST00000507459 ARMC5Q96C12 935 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms