RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 PPP1R12BO60237 982 aaPredicted RBP16.69■□□□□ 0.26
RNF4-208ENST00000507247 CELF2O95319 508 aaKnown RBP16.69■□□□□ 0.26
RNF4-208ENST00000507247 AK2P54819 239 aa16.69■□□□□ 0.26
RNF4-208ENST00000507247 TMEM67Q5HYA8 995 aa16.69■□□□□ 0.26
RNF4-208ENST00000507247 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.69■□□□□ 0.26
RNF4-208ENST00000507247 UBAC1Q9BSL1 405 aa16.69■□□□□ 0.26
RNF4-208ENST00000507247 MTA3Q9BTC8 594 aa16.69■□□□□ 0.26
RNF4-208ENST00000507247 ALDH8A1Q9H2A2 487 aaPredicted RBP16.69■□□□□ 0.26
RNF4-208ENST00000507247 LY9Q9HBG7 655 aa16.69■□□□□ 0.26
RNF4-208ENST00000507247 CABP5Q9NP86 173 aa16.69■□□□□ 0.26
RNF4-208ENST00000507247 IREB2P48200 963 aaKnown RBP16.68■□□□□ 0.26
RNF4-208ENST00000507247 NOVP48745 357 aa16.68■□□□□ 0.26
RNF4-208ENST00000507247 MAP3K9P80192 1104 aa16.68■□□□□ 0.26
RNF4-208ENST00000507247 TTLL12Q14166 644 aaPredicted RBP16.68■□□□□ 0.26
RNF4-208ENST00000507247 RAB3GAP1Q15042 981 aa16.68■□□□□ 0.26
RNF4-208ENST00000507247 NOL9Q5SY16 702 aaKnown RBP16.68■□□□□ 0.26
RNF4-208ENST00000507247 CST9Q5W186 159 aa16.68■□□□□ 0.26
RNF4-208ENST00000507247 CCDC84Q86UT8 332 aaPredicted RBP16.68■□□□□ 0.26
RNF4-208ENST00000507247 SCYL3Q8IZE3 742 aa16.68■□□□□ 0.26
RNF4-208ENST00000507247 FBXL16Q8N461 479 aa16.68■□□□□ 0.26
RNF4-208ENST00000507247 LARP6Q9BRS8 491 aaKnown RBP16.68■□□□□ 0.26
RNF4-208ENST00000507247 MTMR4Q9NYA4 1195 aa16.68■□□□□ 0.26
RNF4-208ENST00000507247 ASNSP08243 561 aa16.67■□□□□ 0.26
RNF4-208ENST00000507247 VGLL4Q14135 290 aa16.67■□□□□ 0.26
RNF4-208ENST00000507247 WTAPQ15007 396 aa16.67■□□□□ 0.26
RNF4-208ENST00000507247 SART3Q15020 963 aaKnown RBP16.67■□□□□ 0.26
RNF4-208ENST00000507247 NOL8Q76FK4 1167 aaKnown RBP16.67■□□□□ 0.26
RNF4-208ENST00000507247 ARMC9Q7Z3E5 817 aa16.67■□□□□ 0.26
RNF4-208ENST00000507247 SIAH1Q8IUQ4 282 aa16.67■□□□□ 0.26
RNF4-208ENST00000507247 BRF1Q92994 677 aa16.67■□□□□ 0.26
RNF4-208ENST00000507247 GBA2Q9HCG7 927 aaPredicted RBP16.67■□□□□ 0.26
RNF4-208ENST00000507247 RBM19Q9Y4C8 960 aaKnown RBP16.67■□□□□ 0.26
RNF4-208ENST00000507247 SNCAIPQ9Y6H5 919 aa16.67■□□□□ 0.26
RNF4-208ENST00000507247 ERICH2A1L162 156 aa16.66■□□□□ 0.26
RNF4-208ENST00000507247 UBE2Q2LH0YL09 131 aa16.66■□□□□ 0.26
RNF4-208ENST00000507247 ST18O60284 1047 aa16.66■□□□□ 0.26
RNF4-208ENST00000507247 EEF2P13639 858 aaKnown RBP16.66■□□□□ 0.26
RNF4-208ENST00000507247 LIFRP42702 1097 aa16.66■□□□□ 0.26
RNF4-208ENST00000507247 FGD1P98174 961 aa16.66■□□□□ 0.26
RNF4-208ENST00000507247 ICA1Q05084 483 aa16.66■□□□□ 0.26
RNF4-208ENST00000507247 APOBRQ0VD83 1088 aa16.66■□□□□ 0.26
RNF4-208ENST00000507247 CCDC178Q5BJE1 867 aa16.66■□□□□ 0.26
RNF4-208ENST00000507247 DGKHQ86XP1 1220 aa16.66■□□□□ 0.26
RNF4-208ENST00000507247 ANKS1AQ92625 1134 aa16.66■□□□□ 0.26
RNF4-208ENST00000507247 CLMNQ96JQ2 1002 aa16.66■□□□□ 0.26
RNF4-208ENST00000507247 KANSL2Q9H9L4 492 aa16.66■□□□□ 0.26
RNF4-208ENST00000507247 GINM1Q9NU53 330 aa16.66■□□□□ 0.26
RNF4-208ENST00000507247 BRPF3Q9ULD4 1205 aa16.66■□□□□ 0.26
RNF4-208ENST00000507247 STX8Q9UNK0 236 aa16.66■□□□□ 0.26
RNF4-208ENST00000507247 PTPRFP10586 1907 aa16.66■□□□□ 0.26
RNF4-208ENST00000507247 TTLL1O95922 423 aa16.65■□□□□ 0.26
RNF4-208ENST00000507247 PTPRAP18433 802 aa16.65■□□□□ 0.26
RNF4-208ENST00000507247 LDLRAD1Q5T700 205 aa16.65■□□□□ 0.26
RNF4-208ENST00000507247 IFIT1BQ5T764 474 aaKnown RBP16.65■□□□□ 0.26
RNF4-208ENST00000507247 SGMS1Q86VZ5 419 aa16.65■□□□□ 0.26
RNF4-208ENST00000507247 ANKRD13AQ8IZ07 590 aa16.65■□□□□ 0.26
RNF4-208ENST00000507247 TMEM47Q9BQJ4 181 aa16.65■□□□□ 0.26
RNF4-208ENST00000507247 NYAP2Q9P242 653 aa16.65■□□□□ 0.26
RNF4-208ENST00000507247 CLIP2Q9UDT6 1046 aa16.65■□□□□ 0.26
RNF4-208ENST00000507247 A0A1W2PRG0 241 aa16.64■□□□□ 0.25
RNF4-208ENST00000507247 LARGE1O95461 756 aa16.64■□□□□ 0.25
RNF4-208ENST00000507247 FKBP1BP68106 108 aa16.64■□□□□ 0.25
RNF4-208ENST00000507247 ATP2B2Q01814 1243 aa16.64■□□□□ 0.25
RNF4-208ENST00000507247 LRRC47Q8N1G4 583 aaKnown RBP16.64■□□□□ 0.25
RNF4-208ENST00000507247 C2orf69Q8N8R5 385 aa16.64■□□□□ 0.25
RNF4-208ENST00000507247 IL27Q8NEV9 243 aa16.64■□□□□ 0.25
RNF4-208ENST00000507247 ACER1Q8TDN7 264 aa16.64■□□□□ 0.25
RNF4-208ENST00000507247 PICK1Q9NRD5 415 aa16.64■□□□□ 0.25
RNF4-208ENST00000507247 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.64■□□□□ 0.25
RNF4-208ENST00000507247 TPCN1Q9ULQ1 816 aa16.64■□□□□ 0.25
RNF4-208ENST00000507247 CSADQ9Y600 493 aa16.64■□□□□ 0.25
RNF4-208ENST00000507247 KLF18A0A0U1RQI7 1052 aa16.63■□□□□ 0.25
RNF4-208ENST00000507247 CCDC69A6NI79 296 aa16.63■□□□□ 0.25
RNF4-208ENST00000507247 USP17L5A8MUK1 530 aa16.63■□□□□ 0.25
RNF4-208ENST00000507247 TOP1P11387 765 aaKnown RBP16.63■□□□□ 0.25
RNF4-208ENST00000507247 ECE1P42892 770 aa16.63■□□□□ 0.25
RNF4-208ENST00000507247 EVCP57679 992 aa16.63■□□□□ 0.25
RNF4-208ENST00000507247 ANKRD1Q15327 319 aa16.63■□□□□ 0.25
RNF4-208ENST00000507247 APOA5Q6Q788 366 aa16.63■□□□□ 0.25
RNF4-208ENST00000507247 NFXL1Q6ZNB6 911 aa16.63■□□□□ 0.25
RNF4-208ENST00000507247 RAB11FIP4Q86YS3 637 aa16.63■□□□□ 0.25
RNF4-208ENST00000507247 TMTC2Q8N394 836 aa16.63■□□□□ 0.25
RNF4-208ENST00000507247 CNKSR2Q8WXI2 1034 aa16.63■□□□□ 0.25
RNF4-208ENST00000507247 SNX21Q969T3 373 aa16.63■□□□□ 0.25
RNF4-208ENST00000507247 MYL10Q9BUA6 226 aa16.63■□□□□ 0.25
RNF4-208ENST00000507247 ELP3Q9H9T3 547 aa16.63■□□□□ 0.25
RNF4-208ENST00000507247 PPP4R3BQ5MIZ7 849 aa16.62■□□□□ 0.25
RNF4-208ENST00000507247 RASGRP2Q7LDG7 609 aa16.62■□□□□ 0.25
RNF4-208ENST00000507247 ZNF654Q8IZM8 581 aa16.62■□□□□ 0.25
RNF4-208ENST00000507247 PNMA1Q8ND90 353 aa16.62■□□□□ 0.25
RNF4-208ENST00000507247 MKL1Q969V6 931 aa16.62■□□□□ 0.25
RNF4-208ENST00000507247 KAT14Q9H8E8 782 aa16.62■□□□□ 0.25
RNF4-208ENST00000507247 ARHGEF10LQ9HCE6 1279 aa16.62■□□□□ 0.25
RNF4-208ENST00000507247 RXRAP19793 462 aa16.61■□□□□ 0.25
RNF4-208ENST00000507247 PDIA3P30101 505 aaKnown RBP16.61■□□□□ 0.25
RNF4-208ENST00000507247 ME3Q16798 604 aa16.61■□□□□ 0.25
RNF4-208ENST00000507247 WDR18Q9BV38 432 aa16.61■□□□□ 0.25
RNF4-208ENST00000507247 TBC1D2Q9BYX2 928 aa16.61■□□□□ 0.25
RNF4-208ENST00000507247 LIMCH1Q9UPQ0 1083 aa16.61■□□□□ 0.25
RNF4-208ENST00000507247 HPS5Q9UPZ3 1129 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms