RNA–Protein interactions for RNA: ENST00000506401.6

ITGA3-207, Transcript of integrin subunit alpha 3, humanhuman

TSL 2

Gene ITGA3, Length 1,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-207ENST00000506401 EGFRP00533 1210 aa20.81■□□□□ 0.92
ITGA3-207ENST00000506401 TROAPQ12815 778 aa20.81■□□□□ 0.92
ITGA3-207ENST00000506401 CERKLQ49MI3 558 aaPredicted RBP20.81■□□□□ 0.92
ITGA3-207ENST00000506401 PNMA1Q8ND90 353 aa20.81■□□□□ 0.92
ITGA3-207ENST00000506401 DNAJC18Q9H819 358 aa20.81■□□□□ 0.92
ITGA3-207ENST00000506401 RBM28Q9NW13 759 aaKnown RBP20.81■□□□□ 0.92
ITGA3-207ENST00000506401 ORC3Q9UBD5 711 aaPredicted RBP20.81■□□□□ 0.92
ITGA3-207ENST00000506401 MPHOSPH10O00566 681 aaKnown RBP20.81■□□□□ 0.92
ITGA3-207ENST00000506401 ZSCAN22P10073 491 aaPredicted RBP20.81■□□□□ 0.92
ITGA3-207ENST00000506401 FOXD4L5Q5VV16 416 aaPredicted RBP20.81■□□□□ 0.92
ITGA3-207ENST00000506401 TATDN1Q6P1N9 297 aa20.81■□□□□ 0.92
ITGA3-207ENST00000506401 FOXD4L4Q8WXT5 416 aaPredicted RBP20.81■□□□□ 0.92
ITGA3-207ENST00000506401 CEP95Q96GE4 821 aa20.81■□□□□ 0.92
ITGA3-207ENST00000506401 GBP4Q96PP9 640 aa20.81■□□□□ 0.92
ITGA3-207ENST00000506401 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.81■□□□□ 0.92
ITGA3-207ENST00000506401 VPS37CA5D8V6 355 aaPredicted RBP20.8■□□□□ 0.92
ITGA3-207ENST00000506401 SOCS7O14512 581 aa20.8■□□□□ 0.92
ITGA3-207ENST00000506401 DDNO94850 711 aaPredicted RBP20.8■□□□□ 0.92
ITGA3-207ENST00000506401 IFNAR1P17181 557 aa20.8■□□□□ 0.92
ITGA3-207ENST00000506401 NTRK3Q16288 839 aa20.8■□□□□ 0.92
ITGA3-207ENST00000506401 CTCFLQ8NI51 663 aaPredicted RBP20.8■□□□□ 0.92
ITGA3-207ENST00000506401 MAP3K14Q99558 947 aa20.8■□□□□ 0.92
ITGA3-207ENST00000506401 TMEM47Q9BQJ4 181 aa20.8■□□□□ 0.92
ITGA3-207ENST00000506401 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.8■□□□□ 0.92
ITGA3-207ENST00000506401 TMEM39BQ9GZU3 492 aa20.8■□□□□ 0.92
ITGA3-207ENST00000506401 MTMR4Q9NYA4 1195 aa20.8■□□□□ 0.92
ITGA3-207ENST00000506401 FAM196BA6NMK8 535 aa20.79■□□□□ 0.92
ITGA3-207ENST00000506401 TOP1P11387 765 aaKnown RBP20.79■□□□□ 0.92
ITGA3-207ENST00000506401 LMOD1P29536 600 aaPredicted RBP20.79■□□□□ 0.92
ITGA3-207ENST00000506401 SSRP1Q08945 709 aaKnown RBP20.79■□□□□ 0.92
ITGA3-207ENST00000506401 NFKBIBQ15653 356 aa20.79■□□□□ 0.92
ITGA3-207ENST00000506401 DPY19L2Q6NUT2 758 aa20.79■□□□□ 0.92
ITGA3-207ENST00000506401 HACL1Q9UJ83 578 aa20.79■□□□□ 0.92
ITGA3-207ENST00000506401 IGKV6D-41A0A0C4DH26 115 aa20.78■□□□□ 0.92
ITGA3-207ENST00000506401 H3BQV1 296 aa20.78■□□□□ 0.92
ITGA3-207ENST00000506401 SLURP2P0DP57 97 aa20.78■□□□□ 0.92
ITGA3-207ENST00000506401 FDPSP14324 419 aaKnown RBP20.78■□□□□ 0.92
ITGA3-207ENST00000506401 KIF5BP33176 963 aa20.78■□□□□ 0.92
ITGA3-207ENST00000506401 NOVP48745 357 aa20.78■□□□□ 0.92
ITGA3-207ENST00000506401 RASA3Q14644 834 aa20.78■□□□□ 0.92
ITGA3-207ENST00000506401 IFFO2Q5TF58 517 aa20.78■□□□□ 0.92
ITGA3-207ENST00000506401 MTMR6Q9Y217 621 aa20.78■□□□□ 0.92
ITGA3-207ENST00000506401 TBC1D12O60347 775 aa20.78■□□□□ 0.92
ITGA3-207ENST00000506401 PPFIA3O75145 1194 aa20.78■□□□□ 0.92
ITGA3-207ENST00000506401 EPS15P42566 896 aa20.78■□□□□ 0.92
ITGA3-207ENST00000506401 TRIM22Q8IYM9 498 aa20.78■□□□□ 0.92
ITGA3-207ENST00000506401 FMNL1O95466 1100 aaPredicted RBP20.77■□□□□ 0.92
ITGA3-207ENST00000506401 TTLL1O95922 423 aa20.77■□□□□ 0.92
ITGA3-207ENST00000506401 CLEC17AQ6ZS10 378 aa20.77■□□□□ 0.92
ITGA3-207ENST00000506401 PHKBQ93100 1093 aa20.77■□□□□ 0.92
ITGA3-207ENST00000506401 SLC26A6Q9BXS9 759 aa20.77■□□□□ 0.92
ITGA3-207ENST00000506401 ABCB5Q2M3G0 1257 aa20.76■□□□□ 0.91
ITGA3-207ENST00000506401 WASF1Q92558 559 aa20.76■□□□□ 0.91
ITGA3-207ENST00000506401 CABP5Q9NP86 173 aa20.76■□□□□ 0.91
ITGA3-207ENST00000506401 CLIP2Q9UDT6 1046 aa20.76■□□□□ 0.91
ITGA3-207ENST00000506401 GREB1LQ9C091 1923 aaPredicted RBP20.76■□□□□ 0.91
ITGA3-207ENST00000506401 STK36Q9NRP7 1315 aa20.76■□□□□ 0.91
ITGA3-207ENST00000506401 F13A1P00488 732 aa20.76■□□□□ 0.91
ITGA3-207ENST00000506401 TMEM179Q6ZVK1 233 aa20.76■□□□□ 0.91
ITGA3-207ENST00000506401 APOBEC3FQ8IUX4 373 aaKnown RBP20.76■□□□□ 0.91
ITGA3-207ENST00000506401 TRPM4Q8TD43 1214 aa20.76■□□□□ 0.91
ITGA3-207ENST00000506401 KANSL2Q9H9L4 492 aa20.76■□□□□ 0.91
ITGA3-207ENST00000506401 PGAP2Q9UHJ9 254 aa20.76■□□□□ 0.91
ITGA3-207ENST00000506401 ATP6V1DQ9Y5K8 247 aa20.76■□□□□ 0.91
ITGA3-207ENST00000506401 SRCAPQ6ZRS2 3230 aa20.75■□□□□ 0.91
ITGA3-207ENST00000506401 GNAQP50148 359 aa20.75■□□□□ 0.91
ITGA3-207ENST00000506401 AKAP17AQ02040 695 aaKnown RBP20.75■□□□□ 0.91
ITGA3-207ENST00000506401 CCDC82Q8N4S0 544 aa20.75■□□□□ 0.91
ITGA3-207ENST00000506401 MYH6P13533 1939 aa20.75■□□□□ 0.91
ITGA3-207ENST00000506401 ASTN2O75129 1339 aaPredicted RBP20.75■□□□□ 0.91
ITGA3-207ENST00000506401 ZC3H4Q9UPT8 1303 aaKnown RBP20.75■□□□□ 0.91
ITGA3-207ENST00000506401 BAG4O95429 457 aaKnown RBP20.74■□□□□ 0.91
ITGA3-207ENST00000506401 GRM4Q14833 912 aa20.74■□□□□ 0.91
ITGA3-207ENST00000506401 TMTC3Q6ZXV5 915 aa20.74■□□□□ 0.91
ITGA3-207ENST00000506401 C8orf76Q96K31 380 aa20.74■□□□□ 0.91
ITGA3-207ENST00000506401 DEFB129Q9H1M3 183 aa20.74■□□□□ 0.91
ITGA3-207ENST00000506401 ADARB2Q9NS39 739 aaKnown RBP20.74■□□□□ 0.91
ITGA3-207ENST00000506401 MYH4Q9Y623 1939 aa20.74■□□□□ 0.91
ITGA3-207ENST00000506401 MCM4P33991 863 aa20.74■□□□□ 0.91
ITGA3-207ENST00000506401 ANGEL2Q5VTE6 544 aaKnown RBP20.74■□□□□ 0.91
ITGA3-207ENST00000506401 CDC37L1Q7L3B6 337 aa20.74■□□□□ 0.91
ITGA3-207ENST00000506401 NBPF11Q86T75 865 aa20.74■□□□□ 0.91
ITGA3-207ENST00000506401 RGS22Q8NE09 1264 aa20.74■□□□□ 0.91
ITGA3-207ENST00000506401 ALG1Q9BT22 464 aa20.74■□□□□ 0.91
ITGA3-207ENST00000506401 RNF26Q9BY78 433 aaPredicted RBP20.74■□□□□ 0.91
ITGA3-207ENST00000506401 GDF11O95390 407 aa20.73■□□□□ 0.91
ITGA3-207ENST00000506401 PLEKHA8P1O95397 391 aa20.73■□□□□ 0.91
ITGA3-207ENST00000506401 DEXIO95424 95 aa20.73■□□□□ 0.91
ITGA3-207ENST00000506401 FOSBP53539 338 aa20.73■□□□□ 0.91
ITGA3-207ENST00000506401 ATP2B2Q01814 1243 aa20.73■□□□□ 0.91
ITGA3-207ENST00000506401 MAP3K10Q02779 954 aa20.73■□□□□ 0.91
ITGA3-207ENST00000506401 MIGA2Q7L4E1 593 aa20.73■□□□□ 0.91
ITGA3-207ENST00000506401 CMTR1Q8N1G2 835 aaKnown RBP20.73■□□□□ 0.91
ITGA3-207ENST00000506401 NYAP2Q9P242 653 aa20.73■□□□□ 0.91
ITGA3-207ENST00000506401 SCAF8Q9UPN6 1271 aaKnown RBP20.73■□□□□ 0.91
ITGA3-207ENST00000506401 MTMR7Q9Y216 660 aa20.73■□□□□ 0.91
ITGA3-207ENST00000506401 GOLGA6L22H0YM25 854 aa20.72■□□□□ 0.91
ITGA3-207ENST00000506401 CDAN1Q8IWY9 1227 aa20.72■□□□□ 0.91
ITGA3-207ENST00000506401 HOOK2Q96ED9 719 aa20.72■□□□□ 0.91
ITGA3-207ENST00000506401 TEPSINQ96N21 525 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms