RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 C19orf81C9J6K1 198 aa21.3■■□□□ 1
SMN1-204ENST00000506163 HSPD1P10809 573 aaKnown RBP21.3■■□□□ 1
SMN1-204ENST00000506163 CWC27Q6UX04 472 aaKnown RBP21.3■■□□□ 1
SMN1-204ENST00000506163 TMEM179Q6ZVK1 233 aa21.3■■□□□ 1
SMN1-204ENST00000506163 CTU1Q7Z7A3 348 aaKnown RBP21.3■■□□□ 1
SMN1-204ENST00000506163 NACAP1Q9BZK3 213 aa21.3■■□□□ 1
SMN1-204ENST00000506163 NAPBQ9H115 298 aa21.3■■□□□ 1
SMN1-204ENST00000506163 INCENPQ9NQS7 918 aa21.3■■□□□ 1
SMN1-204ENST00000506163 PRDM1O75626 825 aa21.29■■□□□ 1
SMN1-204ENST00000506163 CTGFP29279 349 aa21.29■■□□□ 1
SMN1-204ENST00000506163 ALX1Q15699 326 aa21.29■■□□□ 1
SMN1-204ENST00000506163 ZYXQ15942 572 aaKnown RBP21.29■■□□□ 1
SMN1-204ENST00000506163 CCDC17Q96LX7 622 aa21.29■■□□□ 1
SMN1-204ENST00000506163 PARK7Q99497 189 aaKnown RBP21.29■■□□□ 1
SMN1-204ENST00000506163 ARHGAP39Q9C0H5 1083 aa21.29■■□□□ 1
SMN1-204ENST00000506163 MYH8P13535 1937 aa21.29■■□□□ 1
SMN1-204ENST00000506163 CCDC171Q6TFL3 1326 aa21.29■■□□□ 1
SMN1-204ENST00000506163 FGAP02671 866 aa21.29■■□□□ 1
SMN1-204ENST00000506163 BCRP11274 1271 aa21.29■■□□□ 1
SMN1-204ENST00000506163 PPARAQ07869 468 aa21.29■■□□□ 1
SMN1-204ENST00000506163 KIAA1755Q5JYT7 1200 aa21.29■■□□□ 1
SMN1-204ENST00000506163 KIAA1683Q9H0B3 1180 aa21.29■■□□□ 1
SMN1-204ENST00000506163 CTDSPL2Q05D32 466 aa21.28■■□□□ 1
SMN1-204ENST00000506163 USP17L2Q6R6M4 530 aa21.28■■□□□ 1
SMN1-204ENST00000506163 POTEEQ6S8J3 1075 aa21.28■■□□□ 1
SMN1-204ENST00000506163 C12orf42Q96LP6 360 aa21.28■■□□□ 1
SMN1-204ENST00000506163 ASCC2Q9H1I8 757 aaPredicted RBP21.28■■□□□ 1
SMN1-204ENST00000506163 DIAPH3Q9NSV4 1193 aa21.28■■□□□ 1
SMN1-204ENST00000506163 ZSWIM8A7E2V4 1837 aa21.27■■□□□ 1
SMN1-204ENST00000506163 HOXA7P31268 230 aaPredicted RBP21.27■■□□□ 1
SMN1-204ENST00000506163 OTOP1Q7RTM1 612 aa21.27■■□□□ 1
SMN1-204ENST00000506163 FEZ1Q99689 392 aa21.27■■□□□ 1
SMN1-204ENST00000506163 MKNK2Q9HBH9 465 aa21.27■■□□□ 1
SMN1-204ENST00000506163 TMOD4Q9NZQ9 345 aa21.27■■□□□ 1
SMN1-204ENST00000506163 ERO1AQ96HE7 468 aa21.26■□□□□ 0.99
SMN1-204ENST00000506163 ABHD8Q96I13 439 aa21.26■□□□□ 0.99
SMN1-204ENST00000506163 CCDC136Q96JN2 1154 aa21.26■□□□□ 0.99
SMN1-204ENST00000506163 P2RX7Q99572 595 aaKnown RBP21.26■□□□□ 0.99
SMN1-204ENST00000506163 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.26■□□□□ 0.99
SMN1-204ENST00000506163 GREB1LQ9C091 1923 aaPredicted RBP21.25■□□□□ 0.99
SMN1-204ENST00000506163 PEX10O60683 326 aa21.25■□□□□ 0.99
SMN1-204ENST00000506163 ECM2O94769 699 aaPredicted RBP21.25■□□□□ 0.99
SMN1-204ENST00000506163 CHMLP26374 656 aa21.25■□□□□ 0.99
SMN1-204ENST00000506163 LACTBP83111 547 aaPredicted RBP21.25■□□□□ 0.99
SMN1-204ENST00000506163 NBPF3Q9H094 633 aa21.25■□□□□ 0.99
SMN1-204ENST00000506163 ANAPC4Q9UJX5 808 aa21.25■□□□□ 0.99
SMN1-204ENST00000506163 TRIM17Q9Y577 477 aa21.25■□□□□ 0.99
SMN1-204ENST00000506163 HTTP42858 3142 aa21.25■□□□□ 0.99
SMN1-204ENST00000506163 IGKV6D-41A0A0C4DH26 115 aa21.24■□□□□ 0.99
SMN1-204ENST00000506163 HIP1O00291 1037 aa21.24■□□□□ 0.99
SMN1-204ENST00000506163 CENPBP07199 599 aaPredicted RBP21.24■□□□□ 0.99
SMN1-204ENST00000506163 EEF2P13639 858 aaKnown RBP21.24■□□□□ 0.99
SMN1-204ENST00000506163 VCAM1P19320 739 aa21.24■□□□□ 0.99
SMN1-204ENST00000506163 ICA1Q05084 483 aa21.24■□□□□ 0.99
SMN1-204ENST00000506163 NKX2-3Q8TAU0 364 aa21.24■□□□□ 0.99
SMN1-204ENST00000506163 KANSL2Q9H9L4 492 aa21.24■□□□□ 0.99
SMN1-204ENST00000506163 NEFLP07196 543 aa21.23■□□□□ 0.99
SMN1-204ENST00000506163 FAM47AQ5JRC9 791 aa21.23■□□□□ 0.99
SMN1-204ENST00000506163 ANKRD13CQ8N6S4 541 aa21.23■□□□□ 0.99
SMN1-204ENST00000506163 TMX2Q9Y320 296 aa21.23■□□□□ 0.99
SMN1-204ENST00000506163 FGRP09769 529 aa21.22■□□□□ 0.99
SMN1-204ENST00000506163 OSBPP22059 807 aa21.22■□□□□ 0.99
SMN1-204ENST00000506163 USP14P54578 494 aa21.22■□□□□ 0.99
SMN1-204ENST00000506163 HAND2P61296 217 aa21.22■□□□□ 0.99
SMN1-204ENST00000506163 PABPC4Q13310 644 aaKnown RBP eCLIP21.22■□□□□ 0.99
SMN1-204ENST00000506163 ZNF444Q8N0Y2 327 aaPredicted RBP21.22■□□□□ 0.99
SMN1-204ENST00000506163 SMCR8Q8TEV9 937 aaPredicted RBP21.22■□□□□ 0.99
SMN1-204ENST00000506163 TRIM47Q96LD4 638 aa21.22■□□□□ 0.99
SMN1-204ENST00000506163 EFCC1Q9HA90 598 aa21.22■□□□□ 0.99
SMN1-204ENST00000506163 PNMA3Q9UL41 463 aa21.22■□□□□ 0.99
SMN1-204ENST00000506163 ZMYM6O95789 1325 aa21.21■□□□□ 0.99
SMN1-204ENST00000506163 PDE4BQ07343 736 aa21.21■□□□□ 0.99
SMN1-204ENST00000506163 CATSPERGQ6ZRH7 1159 aa21.21■□□□□ 0.99
SMN1-204ENST00000506163 TXNRD2Q9NNW7 524 aa21.21■□□□□ 0.99
SMN1-204ENST00000506163 PSMC4P43686 418 aa21.21■□□□□ 0.99
SMN1-204ENST00000506163 HERVK_113P62684 666 aa21.21■□□□□ 0.99
SMN1-204ENST00000506163 IRX3P78415 501 aaPredicted RBP21.21■□□□□ 0.99
SMN1-204ENST00000506163 ATP2B2Q01814 1243 aa21.21■□□□□ 0.99
SMN1-204ENST00000506163 PKN2Q16513 984 aaKnown RBP21.21■□□□□ 0.99
SMN1-204ENST00000506163 IFFO2Q5TF58 517 aa21.21■□□□□ 0.99
SMN1-204ENST00000506163 SPICE1Q8N0Z3 855 aa21.21■□□□□ 0.99
SMN1-204ENST00000506163 NEDD1Q8NHV4 660 aa21.21■□□□□ 0.99
SMN1-204ENST00000506163 RPAP3Q9H6T3 665 aaPredicted RBP21.21■□□□□ 0.99
SMN1-204ENST00000506163 ARHGEF10LQ9HCE6 1279 aa21.21■□□□□ 0.99
SMN1-204ENST00000506163 RBPJLQ9UBG7 517 aa21.21■□□□□ 0.99
SMN1-204ENST00000506163 USP17L15C9J2P7 530 aa21.2■□□□□ 0.98
SMN1-204ENST00000506163 USP17L13C9JLJ4 530 aa21.2■□□□□ 0.98
SMN1-204ENST00000506163 USP17L11C9JVI0 530 aa21.2■□□□□ 0.98
SMN1-204ENST00000506163 USP17L18D6R9N7 530 aa21.2■□□□□ 0.98
SMN1-204ENST00000506163 USP17L22D6RA61 530 aa21.2■□□□□ 0.98
SMN1-204ENST00000506163 USP17L17D6RBQ6 530 aa21.2■□□□□ 0.98
SMN1-204ENST00000506163 USP17L19D6RCP7 530 aa21.2■□□□□ 0.98
SMN1-204ENST00000506163 USP17L20D6RJB6 530 aa21.2■□□□□ 0.98
SMN1-204ENST00000506163 SLC3A2P08195 630 aaKnown RBP21.2■□□□□ 0.98
SMN1-204ENST00000506163 MFAP1P55081 439 aaKnown RBP21.2■□□□□ 0.98
SMN1-204ENST00000506163 TFAP4Q01664 338 aa21.2■□□□□ 0.98
SMN1-204ENST00000506163 USP17L24Q0WX57 530 aa21.2■□□□□ 0.98
SMN1-204ENST00000506163 FBXO46Q6PJ61 603 aaPredicted RBP21.2■□□□□ 0.98
SMN1-204ENST00000506163 CEP95Q96GE4 821 aa21.2■□□□□ 0.98
SMN1-204ENST00000506163 VCPKMTQ9H867 229 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms