RNA–Protein interactions for RNA: ENST00000505077.1

RFC1-210, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-210ENST00000505077 TACC3Q9Y6A5 838 aa12.08□□□□□ -0.48
RFC1-210ENST00000505077 IGKV6D-41A0A0C4DH26 115 aa12.07□□□□□ -0.48
RFC1-210ENST00000505077 GH2P01242 217 aa12.07□□□□□ -0.48
RFC1-210ENST00000505077 AKR1B1P15121 316 aa12.07□□□□□ -0.48
RFC1-210ENST00000505077 NOVP48745 357 aa12.07□□□□□ -0.48
RFC1-210ENST00000505077 ICA1Q05084 483 aa12.07□□□□□ -0.48
RFC1-210ENST00000505077 VGLL4Q14135 290 aa12.07□□□□□ -0.48
RFC1-210ENST00000505077 ANKRD1Q15327 319 aa12.07□□□□□ -0.48
RFC1-210ENST00000505077 LDLRAD1Q5T700 205 aa12.07□□□□□ -0.48
RFC1-210ENST00000505077 DGKHQ86XP1 1220 aa12.07□□□□□ -0.48
RFC1-210ENST00000505077 STK11IPQ8N1F8 1099 aa12.07□□□□□ -0.48
RFC1-210ENST00000505077 TMTC2Q8N394 836 aa12.07□□□□□ -0.48
RFC1-210ENST00000505077 KIF2CQ99661 725 aa12.07□□□□□ -0.48
RFC1-210ENST00000505077 ALDH8A1Q9H2A2 487 aaPredicted RBP12.07□□□□□ -0.48
RFC1-210ENST00000505077 AS3MTQ9HBK9 375 aa12.07□□□□□ -0.48
RFC1-210ENST00000505077 THSD7BQ9C0I4 1608 aa12.07□□□□□ -0.48
RFC1-210ENST00000505077 TNKSO95271 1327 aa12.07□□□□□ -0.48
RFC1-210ENST00000505077 RLFQ13129 1914 aa12.06□□□□□ -0.48
RFC1-210ENST00000505077 PRC1O43663 620 aa12.06□□□□□ -0.48
RFC1-210ENST00000505077 ST18O60284 1047 aa12.06□□□□□ -0.48
RFC1-210ENST00000505077 GDF11O95390 407 aa12.06□□□□□ -0.48
RFC1-210ENST00000505077 TTLL1O95922 423 aa12.06□□□□□ -0.48
RFC1-210ENST00000505077 INPP5BP32019 993 aa12.06□□□□□ -0.48
RFC1-210ENST00000505077 LIFRP42702 1097 aa12.06□□□□□ -0.48
RFC1-210ENST00000505077 ANTXR2P58335 489 aa12.06□□□□□ -0.48
RFC1-210ENST00000505077 EXOSC10Q01780 885 aaKnown RBP12.06□□□□□ -0.48
RFC1-210ENST00000505077 FAM47AQ5JRC9 791 aa12.06□□□□□ -0.48
RFC1-210ENST00000505077 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.06□□□□□ -0.48
RFC1-210ENST00000505077 ERO1BQ86YB8 467 aa12.06□□□□□ -0.48
RFC1-210ENST00000505077 ANKS1AQ92625 1134 aa12.06□□□□□ -0.48
RFC1-210ENST00000505077 CEP95Q96GE4 821 aa12.06□□□□□ -0.48
RFC1-210ENST00000505077 HHIPL1Q96JK4 782 aa12.06□□□□□ -0.48
RFC1-210ENST00000505077 AGXT2Q9BYV1 514 aa12.06□□□□□ -0.48
RFC1-210ENST00000505077 ZNF408Q9H9D4 720 aa12.06□□□□□ -0.48
RFC1-210ENST00000505077 ARHGEF10LQ9HCE6 1279 aa12.06□□□□□ -0.48
RFC1-210ENST00000505077 INCENPQ9NQS7 918 aa12.06□□□□□ -0.48
RFC1-210ENST00000505077 MTMR4Q9NYA4 1195 aa12.06□□□□□ -0.48
RFC1-210ENST00000505077 COL11A1P12107 1806 aaPredicted RBP12.06□□□□□ -0.48
RFC1-210ENST00000505077 RBBP6Q7Z6E9 1792 aaKnown RBP12.05□□□□□ -0.48
RFC1-210ENST00000505077 BAZ2BQ9UIF8 2168 aaKnown RBP12.05□□□□□ -0.48
RFC1-210ENST00000505077 SPDYE5A6NIY4 337 aa12.05□□□□□ -0.48
RFC1-210ENST00000505077 USP17L5A8MUK1 530 aa12.05□□□□□ -0.48
RFC1-210ENST00000505077 IFIT3O14879 490 aaKnown RBP12.05□□□□□ -0.48
RFC1-210ENST00000505077 RCAN1P53805 252 aa12.05□□□□□ -0.48
RFC1-210ENST00000505077 FGD1P98174 961 aa12.05□□□□□ -0.48
RFC1-210ENST00000505077 PPATQ06203 517 aa12.05□□□□□ -0.48
RFC1-210ENST00000505077 RRP1BQ14684 758 aaKnown RBP12.05□□□□□ -0.48
RFC1-210ENST00000505077 RAB3GAP1Q15042 981 aa12.05□□□□□ -0.48
RFC1-210ENST00000505077 TMEM67Q5HYA8 995 aa12.05□□□□□ -0.48
RFC1-210ENST00000505077 IFIT1BQ5T764 474 aaKnown RBP12.05□□□□□ -0.48
RFC1-210ENST00000505077 CST9Q5W186 159 aa12.05□□□□□ -0.48
RFC1-210ENST00000505077 DLK2Q6UY11 383 aa12.05□□□□□ -0.48
RFC1-210ENST00000505077 CYB5R4Q7L1T6 521 aa12.05□□□□□ -0.48
RFC1-210ENST00000505077 SGMS1Q86VZ5 419 aa12.05□□□□□ -0.48
RFC1-210ENST00000505077 ENAHQ8N8S7 591 aaPredicted RBP12.05□□□□□ -0.48
RFC1-210ENST00000505077 WDR18Q9BV38 432 aa12.05□□□□□ -0.48
RFC1-210ENST00000505077 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.05□□□□□ -0.48
RFC1-210ENST00000505077 UPF3BQ9BZI7 483 aaKnown RBP12.05□□□□□ -0.48
RFC1-210ENST00000505077 IL17RBQ9NRM6 502 aa12.05□□□□□ -0.48
RFC1-210ENST00000505077 NYAP2Q9P242 653 aa12.05□□□□□ -0.48
RFC1-210ENST00000505077 SNCAIPQ9Y6H5 919 aa12.05□□□□□ -0.48
RFC1-210ENST00000505077 A0A0G2JMZ2 1700 aa12.05□□□□□ -0.48
RFC1-210ENST00000505077 TMEM88BA6NKF7 163 aa12.04□□□□□ -0.48
RFC1-210ENST00000505077 SH2B2O14492 632 aaPredicted RBP12.04□□□□□ -0.48
RFC1-210ENST00000505077 SLURP2P0DP57 97 aa12.04□□□□□ -0.48
RFC1-210ENST00000505077 TOP1P11387 765 aaKnown RBP12.04□□□□□ -0.48
RFC1-210ENST00000505077 PTPRAP18433 802 aa12.04□□□□□ -0.48
RFC1-210ENST00000505077 GUCY1A2P33402 732 aa12.04□□□□□ -0.48
RFC1-210ENST00000505077 MCM2P49736 904 aa12.04□□□□□ -0.48
RFC1-210ENST00000505077 NEK4P51957 841 aa12.04□□□□□ -0.48
RFC1-210ENST00000505077 PPIL2Q13356 520 aa12.04□□□□□ -0.48
RFC1-210ENST00000505077 PRKG1Q13976 671 aa12.04□□□□□ -0.48
RFC1-210ENST00000505077 WTAPQ15007 396 aa12.04□□□□□ -0.48
RFC1-210ENST00000505077 SEPT2Q15019 361 aa12.04□□□□□ -0.48
RFC1-210ENST00000505077 SEC23AQ15436 765 aa12.04□□□□□ -0.48
RFC1-210ENST00000505077 SAPCD2Q86UD0 394 aa12.04□□□□□ -0.48
RFC1-210ENST00000505077 IGDCC4Q8TDY8 1250 aa12.04□□□□□ -0.48
RFC1-210ENST00000505077 ZKSCAN4Q969J2 545 aaPredicted RBP12.04□□□□□ -0.48
RFC1-210ENST00000505077 MKL1Q969V6 931 aa12.04□□□□□ -0.48
RFC1-210ENST00000505077 PDRG1Q9NUG6 133 aa12.04□□□□□ -0.48
RFC1-210ENST00000505077 STX8Q9UNK0 236 aa12.04□□□□□ -0.48
RFC1-210ENST00000505077 ZBTB48P10074 688 aaPredicted RBP12.03□□□□□ -0.48
RFC1-210ENST00000505077 USP14P54578 494 aa12.03□□□□□ -0.48
RFC1-210ENST00000505077 HUNKP57058 714 aa12.03□□□□□ -0.48
RFC1-210ENST00000505077 EVCP57679 992 aa12.03□□□□□ -0.48
RFC1-210ENST00000505077 FMR1Q06787 632 aaKnown RBP eCLIP12.03□□□□□ -0.48
RFC1-210ENST00000505077 RCSD1Q6JBY9 416 aa12.03□□□□□ -0.48
RFC1-210ENST00000505077 ZNF280CQ8ND82 737 aa12.03□□□□□ -0.48
RFC1-210ENST00000505077 KIAA1683Q9H0B3 1180 aa12.03□□□□□ -0.48
RFC1-210ENST00000505077 KAT14Q9H8E8 782 aa12.03□□□□□ -0.48
RFC1-210ENST00000505077 LY9Q9HBG7 655 aa12.03□□□□□ -0.48
RFC1-210ENST00000505077 GOPCQ9HD26 462 aa12.03□□□□□ -0.48
RFC1-210ENST00000505077 CREBZFQ9NS37 354 aa12.03□□□□□ -0.48
RFC1-210ENST00000505077 FZD1Q9UP38 647 aa12.03□□□□□ -0.48
RFC1-210ENST00000505077 TMX2Q9Y320 296 aa12.03□□□□□ -0.48
RFC1-210ENST00000505077 TLL2Q9Y6L7 1015 aa12.03□□□□□ -0.48
RFC1-210ENST00000505077 NID2Q14112 1375 aa12.03□□□□□ -0.48
RFC1-210ENST00000505077 CCDC69A6NI79 296 aa12.02□□□□□ -0.49
RFC1-210ENST00000505077 C19orf81C9J6K1 198 aa12.02□□□□□ -0.49
RFC1-210ENST00000505077 NMT2O60551 498 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms