RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 POLR3KQ9Y2Y1 108 aaPredicted RBP8.42□□□□□ -1.06
DEPDC1B-203ENST00000505017 UNC13AQ9UPW8 1703 aa8.41□□□□□ -1.06
DEPDC1B-203ENST00000505017 DNAJA2O60884 412 aa8.41□□□□□ -1.06
DEPDC1B-203ENST00000505017 GARTP22102 1010 aa8.41□□□□□ -1.06
DEPDC1B-203ENST00000505017 KIR3DL1P43629 444 aa8.41□□□□□ -1.06
DEPDC1B-203ENST00000505017 GAB4Q2WGN9 574 aa8.41□□□□□ -1.06
DEPDC1B-203ENST00000505017 RALGPS1Q5JS13 557 aa8.41□□□□□ -1.06
DEPDC1B-203ENST00000505017 ZNF746Q6NUN9 644 aaPredicted RBP8.41□□□□□ -1.06
DEPDC1B-203ENST00000505017 CILP2Q8IUL8 1156 aa8.41□□□□□ -1.06
DEPDC1B-203ENST00000505017 CEP131Q9UPN4 1083 aa8.41□□□□□ -1.06
DEPDC1B-203ENST00000505017 PRR36Q9H6K5 1346 aa8.4□□□□□ -1.06
DEPDC1B-203ENST00000505017 DNAJC25-GNG10A0A024R161 153 aa8.4□□□□□ -1.06
DEPDC1B-203ENST00000505017 FARP2O94887 1054 aaPredicted RBP8.4□□□□□ -1.06
DEPDC1B-203ENST00000505017 RLBP1P12271 317 aa8.4□□□□□ -1.06
DEPDC1B-203ENST00000505017 GDNFP39905 211 aa8.4□□□□□ -1.06
DEPDC1B-203ENST00000505017 XPCQ01831 940 aaPredicted RBP8.4□□□□□ -1.06
DEPDC1B-203ENST00000505017 KCNMB1Q16558 191 aa8.4□□□□□ -1.06
DEPDC1B-203ENST00000505017 TMEM201Q5SNT2 666 aa8.4□□□□□ -1.06
DEPDC1B-203ENST00000505017 GATAD2BQ8WXI9 593 aa8.4□□□□□ -1.06
DEPDC1B-203ENST00000505017 LRRC10BA6NIK2 292 aa8.39□□□□□ -1.07
DEPDC1B-203ENST00000505017 LRRN2O75325 713 aa8.39□□□□□ -1.07
DEPDC1B-203ENST00000505017 SRFP11831 508 aa8.39□□□□□ -1.07
DEPDC1B-203ENST00000505017 ERVFC1P60507 584 aa8.39□□□□□ -1.07
DEPDC1B-203ENST00000505017 PDE4BQ07343 736 aa8.39□□□□□ -1.07
DEPDC1B-203ENST00000505017 FBXO27Q8NI29 283 aa8.39□□□□□ -1.07
DEPDC1B-203ENST00000505017 PIWIL2Q8TC59 973 aaKnown RBP8.39□□□□□ -1.07
DEPDC1B-203ENST00000505017 COX4I2Q96KJ9 171 aa8.39□□□□□ -1.07
DEPDC1B-203ENST00000505017 TMEM74Q96NL1 305 aa8.39□□□□□ -1.07
DEPDC1B-203ENST00000505017 SORBS3O60504 671 aa8.38□□□□□ -1.07
DEPDC1B-203ENST00000505017 PLCG1P19174 1290 aa8.38□□□□□ -1.07
DEPDC1B-203ENST00000505017 CYP7A1P22680 504 aa8.38□□□□□ -1.07
DEPDC1B-203ENST00000505017 AFMP43652 599 aa8.38□□□□□ -1.07
DEPDC1B-203ENST00000505017 MLANAQ16655 118 aa8.38□□□□□ -1.07
DEPDC1B-203ENST00000505017 PRR23BQ6ZRT6 265 aa8.38□□□□□ -1.07
DEPDC1B-203ENST00000505017 CYB5D2Q8WUJ1 264 aa8.38□□□□□ -1.07
DEPDC1B-203ENST00000505017 ALPK1Q96QP1 1244 aa8.38□□□□□ -1.07
DEPDC1B-203ENST00000505017 RSRP1Q9BUV0 290 aa8.38□□□□□ -1.07
DEPDC1B-203ENST00000505017 SP110Q9HB58 689 aa8.38□□□□□ -1.07
DEPDC1B-203ENST00000505017 COPRSQ9NQ92 184 aa8.38□□□□□ -1.07
DEPDC1B-203ENST00000505017 CHURC1-FNTBB4DL54 471 aa8.37□□□□□ -1.07
DEPDC1B-203ENST00000505017 GRIN3BO60391 1043 aa8.37□□□□□ -1.07
DEPDC1B-203ENST00000505017 GLI1P08151 1106 aa8.37□□□□□ -1.07
DEPDC1B-203ENST00000505017 ETV3P41162 512 aa8.37□□□□□ -1.07
DEPDC1B-203ENST00000505017 FAM160A1Q05DH4 1040 aa8.37□□□□□ -1.07
DEPDC1B-203ENST00000505017 SLFN12Q8IYM2 578 aa8.37□□□□□ -1.07
DEPDC1B-203ENST00000505017 DTWD2Q8NBA8 298 aa8.37□□□□□ -1.07
DEPDC1B-203ENST00000505017 KIRREL1Q96J84 757 aa8.37□□□□□ -1.07
DEPDC1B-203ENST00000505017 KCNK12Q9HB15 430 aa8.37□□□□□ -1.07
DEPDC1B-203ENST00000505017 SLAMF8Q9P0V8 285 aa8.37□□□□□ -1.07
DEPDC1B-203ENST00000505017 KRT1P04264 644 aa8.36□□□□□ -1.07
DEPDC1B-203ENST00000505017 LCE4AQ5TA78 99 aa8.36□□□□□ -1.07
DEPDC1B-203ENST00000505017 FAM13CQ8NE31 585 aa8.36□□□□□ -1.07
DEPDC1B-203ENST00000505017 ADAMTS10Q9H324 1103 aa8.36□□□□□ -1.07
DEPDC1B-203ENST00000505017 REV1Q9UBZ9 1251 aa8.36□□□□□ -1.07
DEPDC1B-203ENST00000505017 HTR3BO95264 441 aa8.35□□□□□ -1.07
DEPDC1B-203ENST00000505017 GBP2P32456 591 aaPredicted RBP8.35□□□□□ -1.07
DEPDC1B-203ENST00000505017 LCE1DQ5T752 114 aa8.35□□□□□ -1.07
DEPDC1B-203ENST00000505017 TMPRSS7Q7RTY8 843 aa8.35□□□□□ -1.07
DEPDC1B-203ENST00000505017 ERMP1Q7Z2K6 904 aa8.35□□□□□ -1.07
DEPDC1B-203ENST00000505017 BAHD1Q8TBE0 780 aaPredicted RBP8.35□□□□□ -1.07
DEPDC1B-203ENST00000505017 GPR62Q9BZJ7 368 aa8.35□□□□□ -1.07
DEPDC1B-203ENST00000505017 GZF1Q9H116 711 aaPredicted RBP8.35□□□□□ -1.07
DEPDC1B-203ENST00000505017 VTI1BQ9UEU0 232 aa8.35□□□□□ -1.07
DEPDC1B-203ENST00000505017 DBX1A6NMT0 343 aa8.34□□□□□ -1.07
DEPDC1B-203ENST00000505017 MINDY4BA8MYZ0 360 aa8.34□□□□□ -1.07
DEPDC1B-203ENST00000505017 TPP2P29144 1249 aaPredicted RBP8.34□□□□□ -1.07
DEPDC1B-203ENST00000505017 TTC6Q86TZ1 520 aa8.34□□□□□ -1.07
DEPDC1B-203ENST00000505017 GOLM1Q8NBJ4 401 aa8.34□□□□□ -1.07
DEPDC1B-203ENST00000505017 VWCEQ96DN2 955 aa8.34□□□□□ -1.07
DEPDC1B-203ENST00000505017 FAM84AQ96KN4 292 aa8.34□□□□□ -1.07
DEPDC1B-203ENST00000505017 KBTBD4Q9NVX7 518 aa8.34□□□□□ -1.07
DEPDC1B-203ENST00000505017 FBXL19Q6PCT2 694 aa8.33□□□□□ -1.08
DEPDC1B-203ENST00000505017 CREG2Q8IUH2 290 aa8.33□□□□□ -1.08
DEPDC1B-203ENST00000505017 KSR1Q8IVT5 923 aa8.33□□□□□ -1.08
DEPDC1B-203ENST00000505017 KCNQ5Q9NR82 932 aa8.33□□□□□ -1.08
DEPDC1B-203ENST00000505017 FAM53CQ9NYF3 392 aa8.33□□□□□ -1.08
DEPDC1B-203ENST00000505017 EBF1Q9UH73 591 aa8.33□□□□□ -1.08
DEPDC1B-203ENST00000505017 TMEM59LQ9UK28 342 aa8.33□□□□□ -1.08
DEPDC1B-203ENST00000505017 BICRAQ9NZM4 1560 aa8.32□□□□□ -1.08
DEPDC1B-203ENST00000505017 SHISA3A0PJX4 238 aa8.32□□□□□ -1.08
DEPDC1B-203ENST00000505017 BPNT1O95861 308 aa8.32□□□□□ -1.08
DEPDC1B-203ENST00000505017 HK2P52789 917 aa8.32□□□□□ -1.08
DEPDC1B-203ENST00000505017 TMEM67Q5HYA8 995 aa8.32□□□□□ -1.08
DEPDC1B-203ENST00000505017 SPOCD1Q6ZMY3 1216 aa8.32□□□□□ -1.08
DEPDC1B-203ENST00000505017 REC114Q7Z4M0 266 aa8.32□□□□□ -1.08
DEPDC1B-203ENST00000505017 TSPYL5Q86VY4 417 aaPredicted RBP8.32□□□□□ -1.08
DEPDC1B-203ENST00000505017 RELL1Q8IUW5 271 aa8.32□□□□□ -1.08
DEPDC1B-203ENST00000505017 TRHRP34981 398 aaPredicted RBP8.31□□□□□ -1.08
DEPDC1B-203ENST00000505017 YARSP54577 528 aaKnown RBP8.31□□□□□ -1.08
DEPDC1B-203ENST00000505017 CCDC27Q2M243 656 aa8.31□□□□□ -1.08
DEPDC1B-203ENST00000505017 FAM196AQ6ZSG2 479 aa8.31□□□□□ -1.08
DEPDC1B-203ENST00000505017 RNF141Q8WVD5 230 aa8.31□□□□□ -1.08
DEPDC1B-203ENST00000505017 KREMEN1Q96MU8 473 aa8.31□□□□□ -1.08
DEPDC1B-203ENST00000505017 KLHL3Q9UH77 587 aa8.31□□□□□ -1.08
DEPDC1B-203ENST00000505017 TLR3O15455 904 aaKnown RBP8.3□□□□□ -1.08
DEPDC1B-203ENST00000505017 GREM1O60565 184 aa8.3□□□□□ -1.08
DEPDC1B-203ENST00000505017 HPXP02790 462 aa8.3□□□□□ -1.08
DEPDC1B-203ENST00000505017 CRKP46108 304 aa8.3□□□□□ -1.08
DEPDC1B-203ENST00000505017 MPP2Q14168 576 aa8.3□□□□□ -1.08
DEPDC1B-203ENST00000505017 TIGD5Q53EQ6 642 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms