RNA–Protein interactions for RNA: ENST00000504985.5

SSBP2-204, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-204ENST00000504985 ARHGEF25Q86VW2 580 aa8.17□□□□□ -1.1
SSBP2-204ENST00000504985 RGL4Q8IZJ4 473 aa8.17□□□□□ -1.1
SSBP2-204ENST00000504985 PDCL2Q8N4E4 241 aa8.17□□□□□ -1.1
SSBP2-204ENST00000504985 PHACTR3Q96KR7 559 aa8.17□□□□□ -1.1
SSBP2-204ENST00000504985 PRIMPOLQ96LW4 560 aa8.17□□□□□ -1.1
SSBP2-204ENST00000504985 PPP1R9BQ96SB3 815 aa8.17□□□□□ -1.1
SSBP2-204ENST00000504985 CEP83Q9Y592 693 aa8.17□□□□□ -1.1
SSBP2-204ENST00000504985 FAM208AQ9UK61 1670 aaKnown RBP8.17□□□□□ -1.1
SSBP2-204ENST00000504985 MAPK8IP3Q9UPT6 1336 aa8.16□□□□□ -1.1
SSBP2-204ENST00000504985 LRRC37A3O60309 1634 aa8.16□□□□□ -1.1
SSBP2-204ENST00000504985 COL16A1Q07092 1604 aaPredicted RBP8.16□□□□□ -1.1
SSBP2-204ENST00000504985 COL22A1Q8NFW1 1626 aaPredicted RBP8.16□□□□□ -1.1
SSBP2-204ENST00000504985 TNFRSF10BO14763 440 aa8.16□□□□□ -1.1
SSBP2-204ENST00000504985 MAFGO15525 162 aa8.16□□□□□ -1.1
SSBP2-204ENST00000504985 HYAL3O43820 417 aaPredicted RBP8.16□□□□□ -1.1
SSBP2-204ENST00000504985 KIF1CO43896 1103 aaKnown RBP8.16□□□□□ -1.1
SSBP2-204ENST00000504985 TRIP4Q15650 581 aaPredicted RBP8.16□□□□□ -1.1
SSBP2-204ENST00000504985 NBPF9Q3BBW0 867 aa8.16□□□□□ -1.1
SSBP2-204ENST00000504985 TRMT2AQ8IZ69 625 aaKnown RBP8.16□□□□□ -1.1
SSBP2-204ENST00000504985 IP6K1Q92551 441 aa8.16□□□□□ -1.1
SSBP2-204ENST00000504985 UPF2Q9HAU5 1272 aaKnown RBP8.16□□□□□ -1.1
SSBP2-204ENST00000504985 SRA1Q9HD15 236 aaKnown RBP8.16□□□□□ -1.1
SSBP2-204ENST00000504985 SMC4Q9NTJ3 1288 aa8.16□□□□□ -1.1
SSBP2-204ENST00000504985 BSDC1Q9NW68 430 aaPredicted RBP8.16□□□□□ -1.1
SSBP2-204ENST00000504985 TULP2O00295 520 aa8.15□□□□□ -1.1
SSBP2-204ENST00000504985 TM4SF5O14894 197 aa8.15□□□□□ -1.1
SSBP2-204ENST00000504985 PSAPP07602 524 aa8.15□□□□□ -1.1
SSBP2-204ENST00000504985 SLFN5Q08AF3 891 aa8.15□□□□□ -1.1
SSBP2-204ENST00000504985 SETDB1Q15047 1291 aa8.15□□□□□ -1.1
SSBP2-204ENST00000504985 SULT6B1Q6IMI4 303 aa8.15□□□□□ -1.1
SSBP2-204ENST00000504985 C16orf46Q6P387 395 aa8.15□□□□□ -1.1
SSBP2-204ENST00000504985 TMED8Q6PL24 325 aaPredicted RBP8.15□□□□□ -1.1
SSBP2-204ENST00000504985 Q6ZS46 218 aa8.15□□□□□ -1.1
SSBP2-204ENST00000504985 CPDO75976 1380 aa8.14□□□□□ -1.11
SSBP2-204ENST00000504985 PHLPP1O60346 1717 aa8.14□□□□□ -1.11
SSBP2-204ENST00000504985 IGSF3O75054 1194 aa8.14□□□□□ -1.11
SSBP2-204ENST00000504985 CCDC172P0C7W6 258 aa8.14□□□□□ -1.11
SSBP2-204ENST00000504985 EIF2AK2P19525 551 aaKnown RBP8.14□□□□□ -1.11
SSBP2-204ENST00000504985 RBM25P49756 843 aaKnown RBP8.14□□□□□ -1.11
SSBP2-204ENST00000504985 GTF2A1P52655 376 aaPredicted RBP8.14□□□□□ -1.11
SSBP2-204ENST00000504985 CBX1P83916 185 aa8.14□□□□□ -1.11
SSBP2-204ENST00000504985 NFE2L2Q16236 605 aa8.14□□□□□ -1.11
SSBP2-204ENST00000504985 NCAPGQ9BPX3 1015 aa8.14□□□□□ -1.11
SSBP2-204ENST00000504985 OGFRQ9NZT2 677 aa8.14□□□□□ -1.11
SSBP2-204ENST00000504985 ZBTB7CA1YPR0 619 aa8.13□□□□□ -1.11
SSBP2-204ENST00000504985 GOLIM4O00461 696 aa8.13□□□□□ -1.11
SSBP2-204ENST00000504985 PRMT3O60678 531 aa8.13□□□□□ -1.11
SSBP2-204ENST00000504985 MAP2K1Q02750 393 aaPredicted RBP8.13□□□□□ -1.11
SSBP2-204ENST00000504985 PRR23CQ6ZRP0 262 aa8.13□□□□□ -1.11
SSBP2-204ENST00000504985 CAPN12Q6ZSI9 719 aa8.13□□□□□ -1.11
SSBP2-204ENST00000504985 SLC51AQ86UW1 340 aa8.13□□□□□ -1.11
SSBP2-204ENST00000504985 WDR63Q8IWG1 891 aa8.13□□□□□ -1.11
SSBP2-204ENST00000504985 CACTIN-AS1Q8N1I8 211 aa8.13□□□□□ -1.11
SSBP2-204ENST00000504985 OR13H1Q8NG92 308 aa8.13□□□□□ -1.11
SSBP2-204ENST00000504985 CXXC1Q9P0U4 656 aaPredicted RBP8.13□□□□□ -1.11
SSBP2-204ENST00000504985 RNF112Q9ULX5 631 aa8.13□□□□□ -1.11
SSBP2-204ENST00000504985 KIAA0232Q92628 1395 aa8.13□□□□□ -1.11
SSBP2-204ENST00000504985 F8W735 103 aaPredicted RBP8.12□□□□□ -1.11
SSBP2-204ENST00000504985 ATG7O95352 703 aa8.12□□□□□ -1.11
SSBP2-204ENST00000504985 MCM4P33991 863 aa8.12□□□□□ -1.11
SSBP2-204ENST00000504985 ZC3H6P61129 1189 aaKnown RBP8.12□□□□□ -1.11
SSBP2-204ENST00000504985 ZKSCAN8Q15776 578 aaPredicted RBP8.12□□□□□ -1.11
SSBP2-204ENST00000504985 MAP4K3Q8IVH8 894 aa8.12□□□□□ -1.11
SSBP2-204ENST00000504985 STK32AQ8WU08 396 aa8.12□□□□□ -1.11
SSBP2-204ENST00000504985 LTV1Q96GA3 475 aaPredicted RBP8.12□□□□□ -1.11
SSBP2-204ENST00000504985 PANK2Q9BZ23 570 aa8.12□□□□□ -1.11
SSBP2-204ENST00000504985 MRPL18Q9H0U6 180 aaKnown RBP8.12□□□□□ -1.11
SSBP2-204ENST00000504985 AKTIPQ9H8T0 292 aa8.12□□□□□ -1.11
SSBP2-204ENST00000504985 NOL7Q9UMY1 257 aaKnown RBP8.12□□□□□ -1.11
SSBP2-204ENST00000504985 GOLGA6L6A8MZA4 724 aa8.11□□□□□ -1.11
SSBP2-204ENST00000504985 NBPF6Q5VWK0 638 aa8.11□□□□□ -1.11
SSBP2-204ENST00000504985 IL22RA1Q8N6P7 574 aa8.11□□□□□ -1.11
SSBP2-204ENST00000504985 USHBP1Q8N6Y0 703 aa8.11□□□□□ -1.11
SSBP2-204ENST00000504985 MYRIPQ8NFW9 859 aa8.11□□□□□ -1.11
SSBP2-204ENST00000504985 ANKRD24Q8TF21 1146 aa8.11□□□□□ -1.11
SSBP2-204ENST00000504985 LRRC59Q96AG4 307 aaKnown RBP8.11□□□□□ -1.11
SSBP2-204ENST00000504985 NBPF4Q96M43 638 aa8.11□□□□□ -1.11
SSBP2-204ENST00000504985 RCAN3Q9UKA8 241 aa8.11□□□□□ -1.11
SSBP2-204ENST00000504985 IL16Q14005 1332 aa8.11□□□□□ -1.11
SSBP2-204ENST00000504985 GOLGA6L22H0YM25 854 aa8.1□□□□□ -1.11
SSBP2-204ENST00000504985 GHRHP01286 108 aa8.1□□□□□ -1.11
SSBP2-204ENST00000504985 GTF2F1P35269 517 aaKnown RBP eCLIP8.1□□□□□ -1.11
SSBP2-204ENST00000504985 CHRNA2Q15822 529 aa8.1□□□□□ -1.11
SSBP2-204ENST00000504985 COL13A1Q5TAT6 717 aaPredicted RBP8.1□□□□□ -1.11
SSBP2-204ENST00000504985 CERS3Q8IU89 383 aa8.1□□□□□ -1.11
SSBP2-204ENST00000504985 NSUN5Q96P11 429 aaKnown RBP8.1□□□□□ -1.11
SSBP2-204ENST00000504985 THUMPD2Q9BTF0 503 aaKnown RBP8.1□□□□□ -1.11
SSBP2-204ENST00000504985 TRIM33Q9UPN9 1127 aa8.1□□□□□ -1.11
SSBP2-204ENST00000504985 SH3BP1Q9Y3L3 701 aa8.1□□□□□ -1.11
SSBP2-204ENST00000504985 COL5A2P05997 1499 aaPredicted RBP8.1□□□□□ -1.11
SSBP2-204ENST00000504985 PKD1L3Q7Z443 1732 aa8.1□□□□□ -1.11
SSBP2-204ENST00000504985 COL14A1Q05707 1796 aaKnown RBP8.1□□□□□ -1.11
SSBP2-204ENST00000504985 PLCH1Q4KWH8 1693 aa8.1□□□□□ -1.11
SSBP2-204ENST00000504985 ADAMTS7Q9UKP4 1686 aa8.1□□□□□ -1.11
SSBP2-204ENST00000504985 LOC102724159A0A0B4J2E5 919 aa8.1□□□□□ -1.11
SSBP2-204ENST00000504985 KIF4AO95239 1232 aa8.1□□□□□ -1.11
SSBP2-204ENST00000504985 PWP2Q15269 919 aaKnown RBP8.1□□□□□ -1.11
SSBP2-204ENST00000504985 NBPF5PQ86XG9 351 aaPredicted RBP8.1□□□□□ -1.11
SSBP2-204ENST00000504985 CLP1Q92989 425 aaKnown RBP8.1□□□□□ -1.11
SSBP2-204ENST00000504985 PAIP2Q9BPZ3 127 aaKnown RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms