RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 HHIPL2Q6UWX4 724 aa5.85□□□□□ -1.47
RFC1-208ENST00000504849 SYT8Q8NBV8 401 aa5.85□□□□□ -1.47
RFC1-208ENST00000504849 TUT1Q9H6E5 874 aaKnown RBP5.85□□□□□ -1.47
RFC1-208ENST00000504849 ZNF552Q9H707 407 aaPredicted RBP5.85□□□□□ -1.47
RFC1-208ENST00000504849 CAPN6Q9Y6Q1 641 aa5.85□□□□□ -1.47
RFC1-208ENST00000504849 CLSPNQ9HAW4 1339 aa5.84□□□□□ -1.47
RFC1-208ENST00000504849 ABL1P00519 1130 aa5.84□□□□□ -1.47
RFC1-208ENST00000504849 ESR1P03372 595 aa5.84□□□□□ -1.47
RFC1-208ENST00000504849 ZXDAP98168 799 aa5.84□□□□□ -1.47
RFC1-208ENST00000504849 TIGD5Q53EQ6 642 aa5.84□□□□□ -1.47
RFC1-208ENST00000504849 EAPPQ56P03 285 aaPredicted RBP5.84□□□□□ -1.47
RFC1-208ENST00000504849 THAP5Q7Z6K1 395 aa5.84□□□□□ -1.47
RFC1-208ENST00000504849 MFSD4AQ8N468 514 aa5.84□□□□□ -1.47
RFC1-208ENST00000504849 ABCB6Q9NP58 842 aa5.84□□□□□ -1.47
RFC1-208ENST00000504849 EEA1Q15075 1411 aa5.83□□□□□ -1.48
RFC1-208ENST00000504849 FAM155AB1AL88 458 aaPredicted RBP5.83□□□□□ -1.48
RFC1-208ENST00000504849 SCAMP3O14828 347 aaKnown RBP5.83□□□□□ -1.48
RFC1-208ENST00000504849 SLITRK5O94991 958 aa5.83□□□□□ -1.48
RFC1-208ENST00000504849 ERCC5P28715 1186 aaPredicted RBP5.83□□□□□ -1.48
RFC1-208ENST00000504849 FGD1P98174 961 aa5.83□□□□□ -1.48
RFC1-208ENST00000504849 TSNAXIP1Q2TAA8 658 aa5.83□□□□□ -1.48
RFC1-208ENST00000504849 RPS26P11Q5JNZ5 115 aaPredicted RBP5.83□□□□□ -1.48
RFC1-208ENST00000504849 USPL1Q5W0Q7 1092 aa5.83□□□□□ -1.48
RFC1-208ENST00000504849 GJD3Q8N144 294 aa5.83□□□□□ -1.48
RFC1-208ENST00000504849 STK35Q8TDR2 534 aa5.83□□□□□ -1.48
RFC1-208ENST00000504849 ADAMTS10Q9H324 1103 aa5.83□□□□□ -1.48
RFC1-208ENST00000504849 EPB41L4AQ9HCS5 686 aaPredicted RBP5.83□□□□□ -1.48
RFC1-208ENST00000504849 FZD6O60353 706 aa5.82□□□□□ -1.48
RFC1-208ENST00000504849 FKBP4Q02790 459 aaKnown RBP eCLIP5.82□□□□□ -1.48
RFC1-208ENST00000504849 ZNF211Q13398 564 aaPredicted RBP5.82□□□□□ -1.48
RFC1-208ENST00000504849 PPM1JQ5JR12 505 aa5.82□□□□□ -1.48
RFC1-208ENST00000504849 UBE2FQ969M7 185 aa5.82□□□□□ -1.48
RFC1-208ENST00000504849 SLC6A17Q9H1V8 727 aa5.82□□□□□ -1.48
RFC1-208ENST00000504849 C19orf44Q9H6X5 657 aa5.82□□□□□ -1.48
RFC1-208ENST00000504849 AFF3P51826 1226 aaKnown RBP5.81□□□□□ -1.48
RFC1-208ENST00000504849 PLP2Q04941 152 aa5.81□□□□□ -1.48
RFC1-208ENST00000504849 RING1Q06587 406 aa5.81□□□□□ -1.48
RFC1-208ENST00000504849 MRPL58Q14197 206 aaKnown RBP5.81□□□□□ -1.48
RFC1-208ENST00000504849 ANKRD13AQ8IZ07 590 aa5.81□□□□□ -1.48
RFC1-208ENST00000504849 BDH2Q9BUT1 245 aa5.81□□□□□ -1.48
RFC1-208ENST00000504849 PPP1R1BQ9UD71 204 aaPredicted RBP5.81□□□□□ -1.48
RFC1-208ENST00000504849 BAZ1AQ9NRL2 1556 aaPredicted RBP5.8□□□□□ -1.48
RFC1-208ENST00000504849 ZC3H12DA2A288 527 aaKnown RBP5.8□□□□□ -1.48
RFC1-208ENST00000504849 ARHGAP4P98171 946 aa5.8□□□□□ -1.48
RFC1-208ENST00000504849 TAGLNQ01995 201 aaKnown RBP5.8□□□□□ -1.48
RFC1-208ENST00000504849 VMACQ2NL98 169 aa5.8□□□□□ -1.48
RFC1-208ENST00000504849 ARMCX6Q7L4S7 300 aa5.8□□□□□ -1.48
RFC1-208ENST00000504849 SLC16A11Q8NCK7 471 aa5.8□□□□□ -1.48
RFC1-208ENST00000504849 GTF3C2Q8WUA4 911 aaPredicted RBP5.8□□□□□ -1.48
RFC1-208ENST00000504849 KCNB2Q92953 911 aa5.8□□□□□ -1.48
RFC1-208ENST00000504849 INTS4Q96HW7 963 aaKnown RBP5.8□□□□□ -1.48
RFC1-208ENST00000504849 BACH2Q9BYV9 841 aa5.8□□□□□ -1.48
RFC1-208ENST00000504849 CACNA2D2Q9NY47 1150 aa5.8□□□□□ -1.48
RFC1-208ENST00000504849 TNIKQ9UKE5 1360 aa5.8□□□□□ -1.48
RFC1-208ENST00000504849 NPR3P17342 541 aa5.79□□□□□ -1.48
RFC1-208ENST00000504849 USP5P45974 858 aa5.79□□□□□ -1.48
RFC1-208ENST00000504849 MTMR3Q13615 1198 aa5.79□□□□□ -1.48
RFC1-208ENST00000504849 ALKBH2Q6NS38 261 aa5.79□□□□□ -1.48
RFC1-208ENST00000504849 PRPF40BQ6NWY9 871 aaKnown RBP5.79□□□□□ -1.48
RFC1-208ENST00000504849 GPR20Q99678 358 aa5.79□□□□□ -1.48
RFC1-208ENST00000504849 EHD4Q9H223 541 aa5.79□□□□□ -1.48
RFC1-208ENST00000504849 YBX2Q9Y2T7 364 aaKnown RBP5.79□□□□□ -1.48
RFC1-208ENST00000504849 CEP162Q5TB80 1403 aa5.79□□□□□ -1.48
RFC1-208ENST00000504849 LMTK3Q96Q04 1460 aa5.78□□□□□ -1.48
RFC1-208ENST00000504849 MATN3O15232 486 aa5.78□□□□□ -1.48
RFC1-208ENST00000504849 HDLBPQ00341 1268 aaKnown RBP5.78□□□□□ -1.48
RFC1-208ENST00000504849 SFRP5Q5T4F7 317 aa5.78□□□□□ -1.48
RFC1-208ENST00000504849 TMEM132EQ6IEE7 984 aa5.78□□□□□ -1.48
RFC1-208ENST00000504849 FRMD5Q7Z6J6 570 aa5.78□□□□□ -1.48
RFC1-208ENST00000504849 MROH2BQ7Z745 1585 aa5.78□□□□□ -1.48
RFC1-208ENST00000504849 NOP9Q86U38 636 aaKnown RBP5.78□□□□□ -1.48
RFC1-208ENST00000504849 SP8Q8IXZ3 490 aa5.78□□□□□ -1.48
RFC1-208ENST00000504849 SIGLEC10Q96LC7 697 aa5.78□□□□□ -1.48
RFC1-208ENST00000504849 SORCS2Q96PQ0 1159 aa5.78□□□□□ -1.48
RFC1-208ENST00000504849 CHMP4AQ9BY43 222 aa5.78□□□□□ -1.48
RFC1-208ENST00000504849 RBCK1Q9BYM8 510 aa5.78□□□□□ -1.48
RFC1-208ENST00000504849 ANO2Q9NQ90 1003 aa5.78□□□□□ -1.48
RFC1-208ENST00000504849 ZSWIM5Q9P217 1185 aa5.78□□□□□ -1.48
RFC1-208ENST00000504849 PRICKLE3O43900 615 aaPredicted RBP5.77□□□□□ -1.49
RFC1-208ENST00000504849 HNRNPUQ00839 825 aaKnown RBP eCLIP5.77□□□□□ -1.49
RFC1-208ENST00000504849 RTP5Q14D33 572 aa5.77□□□□□ -1.49
RFC1-208ENST00000504849 SLC43A3Q8NBI5 491 aa5.77□□□□□ -1.49
RFC1-208ENST00000504849 GPBAR1Q8TDU6 330 aa5.77□□□□□ -1.49
RFC1-208ENST00000504849 ARMC5Q96C12 935 aa5.77□□□□□ -1.49
RFC1-208ENST00000504849 CITED4Q96RK1 184 aa5.77□□□□□ -1.49
RFC1-208ENST00000504849 MENTQ9BUN1 341 aa5.77□□□□□ -1.49
RFC1-208ENST00000504849 LUC7LQ9NQ29 371 aaKnown RBP5.77□□□□□ -1.49
RFC1-208ENST00000504849 METTL5Q9NRN9 209 aaKnown RBP5.77□□□□□ -1.49
RFC1-208ENST00000504849 MBD1Q9UIS9 605 aaPredicted RBP5.77□□□□□ -1.49
RFC1-208ENST00000504849 CSADQ9Y600 493 aa5.77□□□□□ -1.49
RFC1-208ENST00000504849 TTBK1Q5TCY1 1321 aaPredicted RBP5.76□□□□□ -1.49
RFC1-208ENST00000504849 ANKRD62A6NC57 917 aa5.76□□□□□ -1.49
RFC1-208ENST00000504849 WASH4PA8MWX3 477 aa5.76□□□□□ -1.49
RFC1-208ENST00000504849 EIF5BO60841 1220 aaKnown RBP5.76□□□□□ -1.49
RFC1-208ENST00000504849 FAM13AO94988 1023 aa5.76□□□□□ -1.49
RFC1-208ENST00000504849 ZBTB37Q5TC79 503 aa5.76□□□□□ -1.49
RFC1-208ENST00000504849 DPH6Q7L8W6 267 aa5.76□□□□□ -1.49
RFC1-208ENST00000504849 LILRA2Q8N149 483 aa5.76□□□□□ -1.49
RFC1-208ENST00000504849 PDZD8Q8NEN9 1154 aa5.76□□□□□ -1.49
RFC1-208ENST00000504849 CCDC87Q9NVE4 849 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms