RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 TDO2P48775 406 aa17.09■□□□□ 0.33
HOXC9-202ENST00000504557 CDK8P49336 464 aa17.09■□□□□ 0.33
HOXC9-202ENST00000504557 PDE1AP54750 535 aa17.09■□□□□ 0.33
HOXC9-202ENST00000504557 C12orf60Q5U649 245 aa17.09■□□□□ 0.33
HOXC9-202ENST00000504557 RAET1EQ8TD07 263 aa17.09■□□□□ 0.33
HOXC9-202ENST00000504557 EMILIN3Q9NT22 766 aa17.09■□□□□ 0.33
HOXC9-202ENST00000504557 SWAP70Q9UH65 585 aa17.09■□□□□ 0.33
HOXC9-202ENST00000504557 SALL3Q9BXA9 1300 aa17.09■□□□□ 0.33
HOXC9-202ENST00000504557 GSG1L2A8MUP6 293 aa17.08■□□□□ 0.32
HOXC9-202ENST00000504557 TRIM6-TRIM34B2RNG4 842 aa17.08■□□□□ 0.32
HOXC9-202ENST00000504557 TNPO2O14787 897 aaKnown RBP17.08■□□□□ 0.32
HOXC9-202ENST00000504557 HOXD10P28358 340 aa17.08■□□□□ 0.32
HOXC9-202ENST00000504557 ATP2B2Q01814 1243 aa17.08■□□□□ 0.32
HOXC9-202ENST00000504557 PRKCZQ05513 592 aa17.08■□□□□ 0.32
HOXC9-202ENST00000504557 CCDC129Q6ZRS4 1044 aa17.08■□□□□ 0.32
HOXC9-202ENST00000504557 P2RX7Q99572 595 aaKnown RBP17.08■□□□□ 0.32
HOXC9-202ENST00000504557 SRRDQ9UH36 339 aa17.08■□□□□ 0.32
HOXC9-202ENST00000504557 GABRQQ9UN88 632 aa17.08■□□□□ 0.32
HOXC9-202ENST00000504557 MYH4Q9Y623 1939 aa17.08■□□□□ 0.32
HOXC9-202ENST00000504557 SAMD1Q6SPF0 538 aaPredicted RBP17.07■□□□□ 0.32
HOXC9-202ENST00000504557 RILPL2Q969X0 211 aa17.07■□□□□ 0.32
HOXC9-202ENST00000504557 PAGR1Q9BTK6 254 aa17.07■□□□□ 0.32
HOXC9-202ENST00000504557 ARPP21Q9UBL0 812 aaPredicted RBP17.07■□□□□ 0.32
HOXC9-202ENST00000504557 BIN2Q9UBW5 565 aaPredicted RBP17.07■□□□□ 0.32
HOXC9-202ENST00000504557 HTTP42858 3142 aa17.07■□□□□ 0.32
HOXC9-202ENST00000504557 CENPFP49454 3210 aa17.06■□□□□ 0.32
HOXC9-202ENST00000504557 POTEFA5A3E0 1075 aa17.06■□□□□ 0.32
HOXC9-202ENST00000504557 RAD21O60216 631 aa17.06■□□□□ 0.32
HOXC9-202ENST00000504557 GNRH1P01148 92 aa17.06■□□□□ 0.32
HOXC9-202ENST00000504557 GCLCP48506 637 aaPredicted RBP17.06■□□□□ 0.32
HOXC9-202ENST00000504557 HERVK_113P62684 666 aa17.06■□□□□ 0.32
HOXC9-202ENST00000504557 FAM110CQ1W6H9 321 aa17.06■□□□□ 0.32
HOXC9-202ENST00000504557 TMEM179Q6ZVK1 233 aa17.06■□□□□ 0.32
HOXC9-202ENST00000504557 C16orf86Q6ZW13 317 aa17.06■□□□□ 0.32
HOXC9-202ENST00000504557 NBPF11Q86T75 865 aa17.06■□□□□ 0.32
HOXC9-202ENST00000504557 CHD1LQ86WJ1 897 aa17.06■□□□□ 0.32
HOXC9-202ENST00000504557 SMC5Q8IY18 1101 aa17.06■□□□□ 0.32
HOXC9-202ENST00000504557 EPB41L4AQ9HCS5 686 aaPredicted RBP17.06■□□□□ 0.32
HOXC9-202ENST00000504557 STAP2Q9UGK3 403 aa17.06■□□□□ 0.32
HOXC9-202ENST00000504557 RBBP6Q7Z6E9 1792 aaKnown RBP17.05■□□□□ 0.32
HOXC9-202ENST00000504557 A0A1W2PRG0 241 aa17.05■□□□□ 0.32
HOXC9-202ENST00000504557 VCAM1P19320 739 aa17.05■□□□□ 0.32
HOXC9-202ENST00000504557 USP14P54578 494 aa17.05■□□□□ 0.32
HOXC9-202ENST00000504557 ICA1Q05084 483 aa17.05■□□□□ 0.32
HOXC9-202ENST00000504557 ZMYM1Q5SVZ6 1142 aa17.05■□□□□ 0.32
HOXC9-202ENST00000504557 EVI5LQ96CN4 794 aa17.05■□□□□ 0.32
HOXC9-202ENST00000504557 KIAA1683Q9H0B3 1180 aa17.05■□□□□ 0.32
HOXC9-202ENST00000504557 RPAP3Q9H6T3 665 aaPredicted RBP17.05■□□□□ 0.32
HOXC9-202ENST00000504557 MKNK2Q9HBH9 465 aa17.05■□□□□ 0.32
HOXC9-202ENST00000504557 GNAT2P19087 354 aa17.04■□□□□ 0.32
HOXC9-202ENST00000504557 HOXA7P31268 230 aaPredicted RBP17.04■□□□□ 0.32
HOXC9-202ENST00000504557 RGS19P49795 217 aa17.04■□□□□ 0.32
HOXC9-202ENST00000504557 PRMT2P55345 433 aa17.04■□□□□ 0.32
HOXC9-202ENST00000504557 NUCB1Q02818 461 aa17.04■□□□□ 0.32
HOXC9-202ENST00000504557 IFNL3Q8IZI9 196 aa17.04■□□□□ 0.32
HOXC9-202ENST00000504557 SPICE1Q8N0Z3 855 aa17.04■□□□□ 0.32
HOXC9-202ENST00000504557 COA7Q96BR5 231 aa17.04■□□□□ 0.32
HOXC9-202ENST00000504557 ARMC5Q96C12 935 aa17.04■□□□□ 0.32
HOXC9-202ENST00000504557 TMEM106CQ9BVX2 250 aa17.04■□□□□ 0.32
HOXC9-202ENST00000504557 TANGO6Q9C0B7 1094 aa17.04■□□□□ 0.32
HOXC9-202ENST00000504557 ARHGEF10LQ9HCE6 1279 aa17.04■□□□□ 0.32
HOXC9-202ENST00000504557 TXNRD2Q9NNW7 524 aa17.04■□□□□ 0.32
HOXC9-202ENST00000504557 USP17L15C9J2P7 530 aa17.03■□□□□ 0.32
HOXC9-202ENST00000504557 PATL2C9JE40 543 aaKnown RBP17.03■□□□□ 0.32
HOXC9-202ENST00000504557 USP17L13C9JLJ4 530 aa17.03■□□□□ 0.32
HOXC9-202ENST00000504557 USP17L11C9JVI0 530 aa17.03■□□□□ 0.32
HOXC9-202ENST00000504557 USP17L18D6R9N7 530 aa17.03■□□□□ 0.32
HOXC9-202ENST00000504557 USP17L22D6RA61 530 aa17.03■□□□□ 0.32
HOXC9-202ENST00000504557 USP17L17D6RBQ6 530 aa17.03■□□□□ 0.32
HOXC9-202ENST00000504557 USP17L19D6RCP7 530 aa17.03■□□□□ 0.32
HOXC9-202ENST00000504557 USP17L20D6RJB6 530 aa17.03■□□□□ 0.32
HOXC9-202ENST00000504557 PRDM1O75626 825 aa17.03■□□□□ 0.32
HOXC9-202ENST00000504557 ELNP15502 786 aa17.03■□□□□ 0.32
HOXC9-202ENST00000504557 GRK4P32298 578 aa17.03■□□□□ 0.32
HOXC9-202ENST00000504557 FLT3LGP49771 235 aa17.03■□□□□ 0.32
HOXC9-202ENST00000504557 USP17L24Q0WX57 530 aa17.03■□□□□ 0.32
HOXC9-202ENST00000504557 CCAR1Q8IX12 1150 aaKnown RBP17.03■□□□□ 0.32
HOXC9-202ENST00000504557 ZNF333Q96JL9 665 aa17.03■□□□□ 0.32
HOXC9-202ENST00000504557 NACAP1Q9BZK3 213 aa17.03■□□□□ 0.32
HOXC9-202ENST00000504557 NAPBQ9H115 298 aa17.03■□□□□ 0.32
HOXC9-202ENST00000504557 CWC22Q9HCG8 908 aaKnown RBP17.03■□□□□ 0.32
HOXC9-202ENST00000504557 PLXNB2O15031 1838 aa17.03■□□□□ 0.32
HOXC9-202ENST00000504557 COL11A1P12107 1806 aaPredicted RBP17.03■□□□□ 0.32
HOXC9-202ENST00000504557 SBK1Q52WX2 424 aa17.02■□□□□ 0.32
HOXC9-202ENST00000504557 WDR78Q5VTH9 848 aa17.02■□□□□ 0.32
HOXC9-202ENST00000504557 PLEKHM2Q8IWE5 1019 aa17.02■□□□□ 0.32
HOXC9-202ENST00000504557 GPRC5AQ8NFJ5 357 aa17.02■□□□□ 0.32
HOXC9-202ENST00000504557 C12orf42Q96LP6 360 aa17.02■□□□□ 0.32
HOXC9-202ENST00000504557 CCDC17Q96LX7 622 aa17.02■□□□□ 0.32
HOXC9-202ENST00000504557 FAM227BQ96M60 508 aa17.02■□□□□ 0.32
HOXC9-202ENST00000504557 PARP14Q460N5 1801 aa17.01■□□□□ 0.31
HOXC9-202ENST00000504557 ADCY3O60266 1144 aa17.01■□□□□ 0.31
HOXC9-202ENST00000504557 EEF2P13639 858 aaKnown RBP17.01■□□□□ 0.31
HOXC9-202ENST00000504557 EN2P19622 333 aaPredicted RBP17.01■□□□□ 0.31
HOXC9-202ENST00000504557 MTFR1Q15390 333 aa17.01■□□□□ 0.31
HOXC9-202ENST00000504557 KIAA1755Q5JYT7 1200 aa17.01■□□□□ 0.31
HOXC9-202ENST00000504557 GIMAP6Q6P9H5 292 aa17.01■□□□□ 0.31
HOXC9-202ENST00000504557 CATSPERGQ6ZRH7 1159 aa17.01■□□□□ 0.31
HOXC9-202ENST00000504557 RBPJLQ9UBG7 517 aa17.01■□□□□ 0.31
HOXC9-202ENST00000504557 GREB1LQ9C091 1923 aaPredicted RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms