RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 NBPF3Q9H094 633 aa14.13□□□□□ -0.15
PDLIM5-208ENST00000504489 AFG3L2Q9Y4W6 797 aa14.13□□□□□ -0.15
PDLIM5-208ENST00000504489 ZHX2Q9Y6X8 837 aa14.13□□□□□ -0.15
PDLIM5-208ENST00000504489 PARP14Q460N5 1801 aa14.13□□□□□ -0.15
PDLIM5-208ENST00000504489 CXCL11O14625 94 aa14.12□□□□□ -0.15
PDLIM5-208ENST00000504489 IRF6O14896 467 aa14.12□□□□□ -0.15
PDLIM5-208ENST00000504489 ORC4O43929 436 aa14.12□□□□□ -0.15
PDLIM5-208ENST00000504489 AKR1B1P15121 316 aa14.12□□□□□ -0.15
PDLIM5-208ENST00000504489 GUCY1A2P33402 732 aa14.12□□□□□ -0.15
PDLIM5-208ENST00000504489 INHBEP58166 350 aa14.12□□□□□ -0.15
PDLIM5-208ENST00000504489 GSE1Q14687 1217 aa14.12□□□□□ -0.15
PDLIM5-208ENST00000504489 AKNAD1Q5T1N1 836 aa14.12□□□□□ -0.15
PDLIM5-208ENST00000504489 IFNLR1Q8IU57 520 aaPredicted RBP14.12□□□□□ -0.15
PDLIM5-208ENST00000504489 STAG1Q8WVM7 1258 aa14.12□□□□□ -0.15
PDLIM5-208ENST00000504489 WDR18Q9BV38 432 aa14.12□□□□□ -0.15
PDLIM5-208ENST00000504489 RNF41Q9H4P4 317 aaPredicted RBP14.12□□□□□ -0.15
PDLIM5-208ENST00000504489 ANO2Q9NQ90 1003 aa14.12□□□□□ -0.15
PDLIM5-208ENST00000504489 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.12□□□□□ -0.15
PDLIM5-208ENST00000504489 KCNH4Q9UQ05 1017 aa14.12□□□□□ -0.15
PDLIM5-208ENST00000504489 RBM8AQ9Y5S9 174 aaKnown RBP14.12□□□□□ -0.15
PDLIM5-208ENST00000504489 TACC3Q9Y6A5 838 aa14.12□□□□□ -0.15
PDLIM5-208ENST00000504489 TESPA1A2RU30 521 aaPredicted RBP14.11□□□□□ -0.15
PDLIM5-208ENST00000504489 MANSC4A6NHS7 340 aaPredicted RBP14.11□□□□□ -0.15
PDLIM5-208ENST00000504489 MPHOSPH10O00566 681 aaKnown RBP14.11□□□□□ -0.15
PDLIM5-208ENST00000504489 REC8O95072 547 aa14.11□□□□□ -0.15
PDLIM5-208ENST00000504489 NT5C2P49902 561 aa14.11□□□□□ -0.15
PDLIM5-208ENST00000504489 GTF2A2P52657 109 aa14.11□□□□□ -0.15
PDLIM5-208ENST00000504489 KIF23Q02241 960 aaPredicted RBP14.11□□□□□ -0.15
PDLIM5-208ENST00000504489 MKRN3Q13064 507 aaKnown RBP14.11□□□□□ -0.15
PDLIM5-208ENST00000504489 SNAPC2Q13487 334 aa14.11□□□□□ -0.15
PDLIM5-208ENST00000504489 MFSD6Q6ZSS7 791 aa14.11□□□□□ -0.15
PDLIM5-208ENST00000504489 ZNF280CQ8ND82 737 aa14.11□□□□□ -0.15
PDLIM5-208ENST00000504489 MS4A4AQ96JQ5 239 aa14.11□□□□□ -0.15
PDLIM5-208ENST00000504489 ZIC5Q96T25 663 aa14.11□□□□□ -0.15
PDLIM5-208ENST00000504489 AS3MTQ9HBK9 375 aa14.11□□□□□ -0.15
PDLIM5-208ENST00000504489 INCENPQ9NQS7 918 aa14.11□□□□□ -0.15
PDLIM5-208ENST00000504489 PLIN4Q96Q06 1357 aa14.1□□□□□ -0.15
PDLIM5-208ENST00000504489 EPB41L2O43491 1005 aaKnown RBP14.1□□□□□ -0.15
PDLIM5-208ENST00000504489 PRDM1O75626 825 aa14.1□□□□□ -0.15
PDLIM5-208ENST00000504489 CYP21A2P08686 494 aa14.1□□□□□ -0.15
PDLIM5-208ENST00000504489 TM4SF4P48230 202 aa14.1□□□□□ -0.15
PDLIM5-208ENST00000504489 SEPT2Q15019 361 aa14.1□□□□□ -0.15
PDLIM5-208ENST00000504489 RAB3GAP1Q15042 981 aa14.1□□□□□ -0.15
PDLIM5-208ENST00000504489 NECTIN1Q15223 517 aa14.1□□□□□ -0.15
PDLIM5-208ENST00000504489 CCDC84Q86UT8 332 aaPredicted RBP14.1□□□□□ -0.15
PDLIM5-208ENST00000504489 TBC1D10CQ8IV04 446 aa14.1□□□□□ -0.15
PDLIM5-208ENST00000504489 JMYQ8N9B5 988 aa14.1□□□□□ -0.15
PDLIM5-208ENST00000504489 NEDD1Q8NHV4 660 aa14.1□□□□□ -0.15
PDLIM5-208ENST00000504489 SPOCK2Q92563 424 aa14.1□□□□□ -0.15
PDLIM5-208ENST00000504489 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.1□□□□□ -0.15
PDLIM5-208ENST00000504489 PCNTO95613 3336 aa14.1□□□□□ -0.15
PDLIM5-208ENST00000504489 RLFQ13129 1914 aa14.09□□□□□ -0.15
PDLIM5-208ENST00000504489 TSPY3P0CV98 308 aa14.09□□□□□ -0.15
PDLIM5-208ENST00000504489 TSPY8P0CW00 308 aa14.09□□□□□ -0.15
PDLIM5-208ENST00000504489 CETPP11597 493 aa14.09□□□□□ -0.15
PDLIM5-208ENST00000504489 TIE1P35590 1138 aa14.09□□□□□ -0.15
PDLIM5-208ENST00000504489 TFAP4Q01664 338 aa14.09□□□□□ -0.15
PDLIM5-208ENST00000504489 SREBF2Q12772 1141 aa14.09□□□□□ -0.15
PDLIM5-208ENST00000504489 SPP2Q13103 211 aa14.09□□□□□ -0.15
PDLIM5-208ENST00000504489 KANSL2Q9H9L4 492 aa14.09□□□□□ -0.15
PDLIM5-208ENST00000504489 MYH6P13533 1939 aa14.08□□□□□ -0.16
PDLIM5-208ENST00000504489 IGKV6D-41A0A0C4DH26 115 aa14.08□□□□□ -0.16
PDLIM5-208ENST00000504489 A0A0G2JLL6 359 aaPredicted RBP14.08□□□□□ -0.16
PDLIM5-208ENST00000504489 C19orf81C9J6K1 198 aa14.08□□□□□ -0.16
PDLIM5-208ENST00000504489 USP17L10C9JJH3 530 aa14.08□□□□□ -0.16
PDLIM5-208ENST00000504489 RANBP6O60518 1105 aaKnown RBP14.08□□□□□ -0.16
PDLIM5-208ENST00000504489 EIF5BO60841 1220 aaKnown RBP14.08□□□□□ -0.16
PDLIM5-208ENST00000504489 PYGBP11216 843 aa14.08□□□□□ -0.16
PDLIM5-208ENST00000504489 BACE1P56817 501 aa14.08□□□□□ -0.16
PDLIM5-208ENST00000504489 SH3D19Q5HYK7 790 aa14.08□□□□□ -0.16
PDLIM5-208ENST00000504489 FAM47AQ5JRC9 791 aa14.08□□□□□ -0.16
PDLIM5-208ENST00000504489 FASTKD5Q7L8L6 764 aaKnown RBP14.08□□□□□ -0.16
PDLIM5-208ENST00000504489 PRRT2Q7Z6L0 340 aaPredicted RBP14.08□□□□□ -0.16
PDLIM5-208ENST00000504489 SIAH1Q8IUQ4 282 aa14.08□□□□□ -0.16
PDLIM5-208ENST00000504489 CNNM2Q9H8M5 875 aa14.08□□□□□ -0.16
PDLIM5-208ENST00000504489 TRPC6Q9Y210 931 aa14.08□□□□□ -0.16
PDLIM5-208ENST00000504489 COL11A1P12107 1806 aaPredicted RBP14.08□□□□□ -0.16
PDLIM5-208ENST00000504489 MGAMO43451 1857 aa14.08□□□□□ -0.16
PDLIM5-208ENST00000504489 CCL15-CCL14A0A0B4J2E2 113 aa14.07□□□□□ -0.16
PDLIM5-208ENST00000504489 TRIM75PA6NK02 468 aa14.07□□□□□ -0.16
PDLIM5-208ENST00000504489 TSPY2A6NKD2 308 aa14.07□□□□□ -0.16
PDLIM5-208ENST00000504489 SLC27A2O14975 620 aa14.07□□□□□ -0.16
PDLIM5-208ENST00000504489 MAP2K1Q02750 393 aaPredicted RBP14.07□□□□□ -0.16
PDLIM5-208ENST00000504489 ICA1Q05084 483 aa14.07□□□□□ -0.16
PDLIM5-208ENST00000504489 MOGSQ13724 837 aa14.07□□□□□ -0.16
PDLIM5-208ENST00000504489 CCL15Q16663 113 aa14.07□□□□□ -0.16
PDLIM5-208ENST00000504489 RRP12Q5JTH9 1297 aaKnown RBP14.07□□□□□ -0.16
PDLIM5-208ENST00000504489 PPP4R3BQ5MIZ7 849 aa14.07□□□□□ -0.16
PDLIM5-208ENST00000504489 RNF20Q5VTR2 975 aa14.07□□□□□ -0.16
PDLIM5-208ENST00000504489 CREB3L3Q68CJ9 461 aa14.07□□□□□ -0.16
PDLIM5-208ENST00000504489 BRI3BPQ8WY22 251 aa14.07□□□□□ -0.16
PDLIM5-208ENST00000504489 ESR2Q92731 530 aa14.07□□□□□ -0.16
PDLIM5-208ENST00000504489 KRT23Q9C075 422 aa14.07□□□□□ -0.16
PDLIM5-208ENST00000504489 KIAA1683Q9H0B3 1180 aa14.07□□□□□ -0.16
PDLIM5-208ENST00000504489 ARHGEF10LQ9HCE6 1279 aa14.07□□□□□ -0.16
PDLIM5-208ENST00000504489 TOMM22Q9NS69 142 aa14.07□□□□□ -0.16
PDLIM5-208ENST00000504489 BMP2KQ9NSY1 1161 aaPredicted RBP14.07□□□□□ -0.16
PDLIM5-208ENST00000504489 TCP11L1Q9NUJ3 509 aa14.07□□□□□ -0.16
PDLIM5-208ENST00000504489 NYAP2Q9P242 653 aa14.07□□□□□ -0.16
PDLIM5-208ENST00000504489 NEDD4P46934 1319 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms