RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 SEPT2Q15019 361 aa16.89■□□□□ 0.29
PDLIM7-211ENST00000504318 Q3C1V9 767 aa16.89■□□□□ 0.29
PDLIM7-211ENST00000504318 USP17L2Q6R6M4 530 aa16.89■□□□□ 0.29
PDLIM7-211ENST00000504318 UBE2Q1Q7Z7E8 422 aa16.89■□□□□ 0.29
PDLIM7-211ENST00000504318 RAET1EQ8TD07 263 aa16.89■□□□□ 0.29
PDLIM7-211ENST00000504318 STRBPQ96SI9 672 aaKnown RBP16.89■□□□□ 0.29
PDLIM7-211ENST00000504318 TMOD4Q9NZQ9 345 aa16.89■□□□□ 0.29
PDLIM7-211ENST00000504318 TNPO2O14787 897 aaKnown RBP16.88■□□□□ 0.29
PDLIM7-211ENST00000504318 KIAA1755Q5JYT7 1200 aa16.88■□□□□ 0.29
PDLIM7-211ENST00000504318 CTR9Q6PD62 1173 aa16.88■□□□□ 0.29
PDLIM7-211ENST00000504318 SLAIN1Q8ND83 568 aa16.88■□□□□ 0.29
PDLIM7-211ENST00000504318 PXYLP1Q8TE99 480 aa16.88■□□□□ 0.29
PDLIM7-211ENST00000504318 TTC41PQ6P2S7 1318 aa16.88■□□□□ 0.29
PDLIM7-211ENST00000504318 GSG1L2A8MUP6 293 aa16.87■□□□□ 0.29
PDLIM7-211ENST00000504318 USP17L12C9JPN9 530 aa16.87■□□□□ 0.29
PDLIM7-211ENST00000504318 USP17L21D6R901 530 aa16.87■□□□□ 0.29
PDLIM7-211ENST00000504318 ADCY3O60266 1144 aa16.87■□□□□ 0.29
PDLIM7-211ENST00000504318 AKR1B1P15121 316 aa16.87■□□□□ 0.29
PDLIM7-211ENST00000504318 VCAM1P19320 739 aa16.87■□□□□ 0.29
PDLIM7-211ENST00000504318 RAB3GAP1Q15042 981 aa16.87■□□□□ 0.29
PDLIM7-211ENST00000504318 LBX2Q6XYB7 198 aa16.87■□□□□ 0.29
PDLIM7-211ENST00000504318 CATSPERGQ6ZRH7 1159 aa16.87■□□□□ 0.29
PDLIM7-211ENST00000504318 C16orf86Q6ZW13 317 aa16.87■□□□□ 0.29
PDLIM7-211ENST00000504318 TMEM106CQ9BVX2 250 aa16.87■□□□□ 0.29
PDLIM7-211ENST00000504318 EPB41L4AQ9HCS5 686 aaPredicted RBP16.87■□□□□ 0.29
PDLIM7-211ENST00000504318 SWAP70Q9UH65 585 aa16.87■□□□□ 0.29
PDLIM7-211ENST00000504318 MYCP01106 439 aaPredicted RBP16.86■□□□□ 0.29
PDLIM7-211ENST00000504318 ELNP15502 786 aa16.86■□□□□ 0.29
PDLIM7-211ENST00000504318 CDK8P49336 464 aa16.86■□□□□ 0.29
PDLIM7-211ENST00000504318 IRX3P78415 501 aaPredicted RBP16.86■□□□□ 0.29
PDLIM7-211ENST00000504318 HDAC1Q13547 482 aaPredicted RBP16.86■□□□□ 0.29
PDLIM7-211ENST00000504318 PRPF38BQ5VTL8 546 aaKnown RBP16.86■□□□□ 0.29
PDLIM7-211ENST00000504318 CLEC10AQ8IUN9 316 aa16.86■□□□□ 0.29
PDLIM7-211ENST00000504318 USP6NLQ92738 828 aa16.86■□□□□ 0.29
PDLIM7-211ENST00000504318 SLC4A4Q9Y6R1 1079 aa16.86■□□□□ 0.29
PDLIM7-211ENST00000504318 ROBO3Q96MS0 1386 aa16.86■□□□□ 0.29
PDLIM7-211ENST00000504318 M0R2C6 588 aa16.85■□□□□ 0.29
PDLIM7-211ENST00000504318 RNF113AO15541 343 aaKnown RBP16.85■□□□□ 0.29
PDLIM7-211ENST00000504318 GJB1P08034 283 aa16.85■□□□□ 0.29
PDLIM7-211ENST00000504318 CCL5P13501 91 aa16.85■□□□□ 0.29
PDLIM7-211ENST00000504318 GJA8P48165 433 aa16.85■□□□□ 0.29
PDLIM7-211ENST00000504318 USP14P54578 494 aa16.85■□□□□ 0.29
PDLIM7-211ENST00000504318 ERVK-9P63128 1117 aa16.85■□□□□ 0.29
PDLIM7-211ENST00000504318 ERVK-24P63145 666 aa16.85■□□□□ 0.29
PDLIM7-211ENST00000504318 ZYXQ15942 572 aaKnown RBP16.85■□□□□ 0.29
PDLIM7-211ENST00000504318 ZSCAN25Q6NSZ9 544 aa16.85■□□□□ 0.29
PDLIM7-211ENST00000504318 APPBP2Q92624 585 aa16.85■□□□□ 0.29
PDLIM7-211ENST00000504318 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.85■□□□□ 0.29
PDLIM7-211ENST00000504318 UNC93B1Q9H1C4 597 aa16.85■□□□□ 0.29
PDLIM7-211ENST00000504318 PORCNQ9H237 461 aa16.85■□□□□ 0.29
PDLIM7-211ENST00000504318 SPDYE16A6NNV3 312 aaPredicted RBP16.84■□□□□ 0.29
PDLIM7-211ENST00000504318 USP17L15C9J2P7 530 aa16.84■□□□□ 0.29
PDLIM7-211ENST00000504318 USP17L13C9JLJ4 530 aa16.84■□□□□ 0.29
PDLIM7-211ENST00000504318 USP17L11C9JVI0 530 aa16.84■□□□□ 0.29
PDLIM7-211ENST00000504318 USP17L18D6R9N7 530 aa16.84■□□□□ 0.29
PDLIM7-211ENST00000504318 USP17L22D6RA61 530 aa16.84■□□□□ 0.29
PDLIM7-211ENST00000504318 USP17L17D6RBQ6 530 aa16.84■□□□□ 0.29
PDLIM7-211ENST00000504318 USP17L19D6RCP7 530 aa16.84■□□□□ 0.29
PDLIM7-211ENST00000504318 USP17L20D6RJB6 530 aa16.84■□□□□ 0.29
PDLIM7-211ENST00000504318 FOXP2O15409 715 aa16.84■□□□□ 0.29
PDLIM7-211ENST00000504318 INHAP05111 366 aa16.84■□□□□ 0.29
PDLIM7-211ENST00000504318 USP17L24Q0WX57 530 aa16.84■□□□□ 0.29
PDLIM7-211ENST00000504318 SBK1Q52WX2 424 aa16.84■□□□□ 0.29
PDLIM7-211ENST00000504318 TMEM179Q6ZVK1 233 aa16.84■□□□□ 0.29
PDLIM7-211ENST00000504318 GPRC5AQ8NFJ5 357 aa16.84■□□□□ 0.29
PDLIM7-211ENST00000504318 COA7Q96BR5 231 aa16.84■□□□□ 0.29
PDLIM7-211ENST00000504318 CABP5Q9NP86 173 aa16.84■□□□□ 0.29
PDLIM7-211ENST00000504318 PAK6Q9NQU5 681 aaPredicted RBP16.84■□□□□ 0.29
PDLIM7-211ENST00000504318 GPAA1O43292 621 aa16.83■□□□□ 0.28
PDLIM7-211ENST00000504318 GIMAP6Q6P9H5 292 aa16.83■□□□□ 0.28
PDLIM7-211ENST00000504318 GTF3C2Q8WUA4 911 aaPredicted RBP16.83■□□□□ 0.28
PDLIM7-211ENST00000504318 GPATCH3Q96I76 525 aa16.83■□□□□ 0.28
PDLIM7-211ENST00000504318 BTBD7Q9P203 1132 aa16.83■□□□□ 0.28
PDLIM7-211ENST00000504318 STAP2Q9UGK3 403 aa16.83■□□□□ 0.28
PDLIM7-211ENST00000504318 ALPK3Q96L96 1907 aa16.82■□□□□ 0.28
PDLIM7-211ENST00000504318 ZNF236Q9UL36 1845 aa16.82■□□□□ 0.28
PDLIM7-211ENST00000504318 GLRX3O76003 335 aaKnown RBP16.82■□□□□ 0.28
PDLIM7-211ENST00000504318 ZFYP08048 801 aaPredicted RBP16.82■□□□□ 0.28
PDLIM7-211ENST00000504318 MX1P20591 662 aa16.82■□□□□ 0.28
PDLIM7-211ENST00000504318 TRIM32Q13049 653 aa16.82■□□□□ 0.28
PDLIM7-211ENST00000504318 MORN1Q5T089 497 aa16.82■□□□□ 0.28
PDLIM7-211ENST00000504318 TRIB2Q92519 343 aa16.82■□□□□ 0.28
PDLIM7-211ENST00000504318 SEC62Q99442 399 aaKnown RBP16.82■□□□□ 0.28
PDLIM7-211ENST00000504318 FEZ1Q99689 392 aa16.82■□□□□ 0.28
PDLIM7-211ENST00000504318 RPAP3Q9H6T3 665 aaPredicted RBP16.82■□□□□ 0.28
PDLIM7-211ENST00000504318 ARPP21Q9UBL0 812 aaPredicted RBP16.82■□□□□ 0.28
PDLIM7-211ENST00000504318 TMX2Q9Y320 296 aa16.82■□□□□ 0.28
PDLIM7-211ENST00000504318 RABGAP1Q9Y3P9 1069 aa16.82■□□□□ 0.28
PDLIM7-211ENST00000504318 COL11A1P12107 1806 aaPredicted RBP16.82■□□□□ 0.28
PDLIM7-211ENST00000504318 IGHA2P01877 340 aa16.81■□□□□ 0.28
PDLIM7-211ENST00000504318 UBXN2AP68543 259 aa16.81■□□□□ 0.28
PDLIM7-211ENST00000504318 ZMYM1Q5SVZ6 1142 aa16.81■□□□□ 0.28
PDLIM7-211ENST00000504318 MAP3K21Q5TCX8 1036 aa16.81■□□□□ 0.28
PDLIM7-211ENST00000504318 GPR142Q7Z601 462 aa16.81■□□□□ 0.28
PDLIM7-211ENST00000504318 CCDC17Q96LX7 622 aa16.81■□□□□ 0.28
PDLIM7-211ENST00000504318 RNF208Q9H0X6 261 aa16.81■□□□□ 0.28
PDLIM7-211ENST00000504318 IGKV6D-41A0A0C4DH26 115 aa16.8■□□□□ 0.28
PDLIM7-211ENST00000504318 MPHOSPH10O00566 681 aaKnown RBP16.8■□□□□ 0.28
PDLIM7-211ENST00000504318 ERC2O15083 957 aa16.8■□□□□ 0.28
PDLIM7-211ENST00000504318 XRCC5P13010 732 aaKnown RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms