RNA–Protein interactions for RNA: ENST00000504273.5

SNX25-202, Transcript of sorting nexin 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX25, Length 3,323 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-202ENST00000504273 RRP12Q5JTH9 1297 aaKnown RBP8.14□□□□□ -1.11
SNX25-202ENST00000504273 NFXL1Q6ZNB6 911 aa8.14□□□□□ -1.11
SNX25-202ENST00000504273 CCDC73Q6ZRK6 1079 aa8.14□□□□□ -1.11
SNX25-202ENST00000504273 KIAA1468Q9P260 1216 aa8.14□□□□□ -1.11
SNX25-202ENST00000504273 KCNJ14Q9UNX9 436 aa8.14□□□□□ -1.11
SNX25-202ENST00000504273 SLC12A7Q9Y666 1083 aa8.14□□□□□ -1.11
SNX25-202ENST00000504273 ADAMTS3O15072 1205 aa8.13□□□□□ -1.11
SNX25-202ENST00000504273 MECOMQ03112 1051 aa8.13□□□□□ -1.11
SNX25-202ENST00000504273 ARID5BQ14865 1188 aa8.13□□□□□ -1.11
SNX25-202ENST00000504273 NCAPHQ15003 741 aa8.13□□□□□ -1.11
SNX25-202ENST00000504273 DPCR1Q3MIW9 517 aa8.13□□□□□ -1.11
SNX25-202ENST00000504273 CCDC186Q7Z3E2 898 aa8.13□□□□□ -1.11
SNX25-202ENST00000504273 FOXP4Q8IVH2 680 aaPredicted RBP8.13□□□□□ -1.11
SNX25-202ENST00000504273 ENAHQ8N8S7 591 aaPredicted RBP8.13□□□□□ -1.11
SNX25-202ENST00000504273 OXER1Q8TDS5 423 aa8.13□□□□□ -1.11
SNX25-202ENST00000504273 SECISBP2LQ93073 1101 aaKnown RBP8.13□□□□□ -1.11
SNX25-202ENST00000504273 L3MBTL3Q96JM7 780 aaPredicted RBP8.13□□□□□ -1.11
SNX25-202ENST00000504273 MTA3Q9BTC8 594 aa8.13□□□□□ -1.11
SNX25-202ENST00000504273 RAI14Q9P0K7 980 aa8.13□□□□□ -1.11
SNX25-202ENST00000504273 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.13□□□□□ -1.11
SNX25-202ENST00000504273 BTBD18B2RXH4 712 aa8.13□□□□□ -1.11
SNX25-202ENST00000504273 GNPATO15228 680 aa8.13□□□□□ -1.11
SNX25-202ENST00000504273 KINO60870 393 aaKnown RBP8.13□□□□□ -1.11
SNX25-202ENST00000504273 PPP6R2O75170 966 aa8.13□□□□□ -1.11
SNX25-202ENST00000504273 MMP1P03956 469 aa8.13□□□□□ -1.11
SNX25-202ENST00000504273 GRIK5Q16478 980 aa8.13□□□□□ -1.11
SNX25-202ENST00000504273 PNMA8AQ86V59 439 aaPredicted RBP8.13□□□□□ -1.11
SNX25-202ENST00000504273 ZNF654Q8IZM8 581 aa8.13□□□□□ -1.11
SNX25-202ENST00000504273 BRIP1Q9BX63 1249 aa8.13□□□□□ -1.11
SNX25-202ENST00000504273 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.13□□□□□ -1.11
SNX25-202ENST00000504273 DDX60LQ5H9U9 1706 aaKnown RBP8.13□□□□□ -1.11
SNX25-202ENST00000504273 CCDC69A6NI79 296 aa8.13□□□□□ -1.11
SNX25-202ENST00000504273 MINDY4BA8MYZ0 360 aa8.13□□□□□ -1.11
SNX25-202ENST00000504273 WNT7AO00755 349 aa8.13□□□□□ -1.11
SNX25-202ENST00000504273 CDKL5O76039 1030 aa8.13□□□□□ -1.11
SNX25-202ENST00000504273 CDC25BP30305 580 aa8.13□□□□□ -1.11
SNX25-202ENST00000504273 MDM2Q00987 491 aaPredicted RBP8.13□□□□□ -1.11
SNX25-202ENST00000504273 SSRP1Q08945 709 aaKnown RBP8.13□□□□□ -1.11
SNX25-202ENST00000504273 WTAPQ15007 396 aa8.13□□□□□ -1.11
SNX25-202ENST00000504273 NPY5RQ15761 445 aa8.13□□□□□ -1.11
SNX25-202ENST00000504273 EARS2Q5JPH6 523 aaKnown RBP8.13□□□□□ -1.11
SNX25-202ENST00000504273 RESP18Q5W5W9 173 aa8.13□□□□□ -1.11
SNX25-202ENST00000504273 FANCBQ8NB91 859 aa8.13□□□□□ -1.11
SNX25-202ENST00000504273 CACTINQ8WUQ7 758 aaKnown RBP8.13□□□□□ -1.11
SNX25-202ENST00000504273 TNKSO95271 1327 aa8.13□□□□□ -1.11
SNX25-202ENST00000504273 PDS5AQ29RF7 1337 aaKnown RBP8.13□□□□□ -1.11
SNX25-202ENST00000504273 FAM205CA6NFA0 338 aa8.12□□□□□ -1.11
SNX25-202ENST00000504273 CYP2D6P10635 497 aa8.12□□□□□ -1.11
SNX25-202ENST00000504273 PRDX5P30044 214 aa8.12□□□□□ -1.11
SNX25-202ENST00000504273 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.12□□□□□ -1.11
SNX25-202ENST00000504273 NACAP1Q9BZK3 213 aa8.12□□□□□ -1.11
SNX25-202ENST00000504273 ABT1Q9ULW3 272 aaKnown RBP8.12□□□□□ -1.11
SNX25-202ENST00000504273 NMT2O60551 498 aa8.12□□□□□ -1.11
SNX25-202ENST00000504273 CAVIN2O95810 425 aa8.12□□□□□ -1.11
SNX25-202ENST00000504273 TPM2P07951 284 aa8.12□□□□□ -1.11
SNX25-202ENST00000504273 NR5A1Q13285 461 aa8.12□□□□□ -1.11
SNX25-202ENST00000504273 RTN1Q16799 776 aa8.12□□□□□ -1.11
SNX25-202ENST00000504273 NOM1Q5C9Z4 860 aaKnown RBP8.12□□□□□ -1.11
SNX25-202ENST00000504273 CCDC82Q8N4S0 544 aa8.12□□□□□ -1.11
SNX25-202ENST00000504273 SETDB2Q96T68 719 aa8.12□□□□□ -1.11
SNX25-202ENST00000504273 TUBE1Q9UJT0 475 aa8.12□□□□□ -1.11
SNX25-202ENST00000504273 NAV1Q8NEY1 1877 aa8.12□□□□□ -1.11
SNX25-202ENST00000504273 PRDM1O75626 825 aa8.11□□□□□ -1.11
SNX25-202ENST00000504273 BMP6P22004 513 aa8.11□□□□□ -1.11
SNX25-202ENST00000504273 SYNE3Q6ZMZ3 975 aa8.11□□□□□ -1.11
SNX25-202ENST00000504273 METTL16Q86W50 562 aaKnown RBP8.11□□□□□ -1.11
SNX25-202ENST00000504273 NOSTRINQ8IVI9 506 aa8.11□□□□□ -1.11
SNX25-202ENST00000504273 AOPEPQ8N6M6 819 aa8.11□□□□□ -1.11
SNX25-202ENST00000504273 FBXW7Q969H0 707 aa8.11□□□□□ -1.11
SNX25-202ENST00000504273 BPIFA3Q9BQP9 254 aa8.11□□□□□ -1.11
SNX25-202ENST00000504273 TRIM5Q9C035 493 aa8.11□□□□□ -1.11
SNX25-202ENST00000504273 FBXO2Q9UK22 296 aaPredicted RBP8.11□□□□□ -1.11
SNX25-202ENST00000504273 LTBP3Q9NS15 1303 aa8.11□□□□□ -1.11
SNX25-202ENST00000504273 PLEKHA8P1O95397 391 aa8.11□□□□□ -1.11
SNX25-202ENST00000504273 RCAN1P53805 252 aa8.11□□□□□ -1.11
SNX25-202ENST00000504273 TROAPQ12815 778 aa8.11□□□□□ -1.11
SNX25-202ENST00000504273 LONRF3Q496Y0 759 aa8.11□□□□□ -1.11
SNX25-202ENST00000504273 CAVIN4Q5BKX8 364 aa8.11□□□□□ -1.11
SNX25-202ENST00000504273 CTU1Q7Z7A3 348 aaKnown RBP8.11□□□□□ -1.11
SNX25-202ENST00000504273 NBPF5PQ86XG9 351 aaPredicted RBP8.11□□□□□ -1.11
SNX25-202ENST00000504273 MRFAP1L1Q96HT8 127 aa8.11□□□□□ -1.11
SNX25-202ENST00000504273 TIGD1Q96MW7 591 aa8.11□□□□□ -1.11
SNX25-202ENST00000504273 NLRP3Q96P20 1036 aa8.11□□□□□ -1.11
SNX25-202ENST00000504273 ZSCAN10Q96SZ4 725 aaPredicted RBP8.11□□□□□ -1.11
SNX25-202ENST00000504273 DCP1AQ9NPI6 582 aaPredicted RBP8.11□□□□□ -1.11
SNX25-202ENST00000504273 ANO10Q9NW15 660 aa8.11□□□□□ -1.11
SNX25-202ENST00000504273 JAG2Q9Y219 1238 aa8.11□□□□□ -1.11
SNX25-202ENST00000504273 PCDHB6Q9Y5E3 794 aa8.11□□□□□ -1.11
SNX25-202ENST00000504273 FOCADQ5VW36 1801 aa8.11□□□□□ -1.11
SNX25-202ENST00000504273 USP17L12C9JPN9 530 aa8.11□□□□□ -1.11
SNX25-202ENST00000504273 USP17L21D6R901 530 aa8.11□□□□□ -1.11
SNX25-202ENST00000504273 SEMA3EO15041 775 aa8.11□□□□□ -1.11
SNX25-202ENST00000504273 HIBADHP31937 336 aaKnown RBP8.11□□□□□ -1.11
SNX25-202ENST00000504273 NLRP12P59046 1061 aa8.11□□□□□ -1.11
SNX25-202ENST00000504273 DIS3L2Q8IYB7 885 aaKnown RBP8.11□□□□□ -1.11
SNX25-202ENST00000504273 TNFRSF25Q93038 417 aa8.11□□□□□ -1.11
SNX25-202ENST00000504273 NYXQ9GZU5 481 aa8.11□□□□□ -1.11
SNX25-202ENST00000504273 GNL3LQ9NVN8 582 aaKnown RBP8.11□□□□□ -1.11
SNX25-202ENST00000504273 ADAMTSL1Q8N6G6 1762 aa8.11□□□□□ -1.11
SNX25-202ENST00000504273 hCG_1642624A0A1W2PR95 340 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms