RNA–Protein interactions for RNA: ENST00000504227.5

CYSTM1-202, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 5

Gene CYSTM1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-202ENST00000504227 ANKS1AQ92625 1134 aa16.26■□□□□ 0.19
CYSTM1-202ENST00000504227 ZKSCAN4Q969J2 545 aaPredicted RBP16.26■□□□□ 0.19
CYSTM1-202ENST00000504227 CEP95Q96GE4 821 aa16.26■□□□□ 0.19
CYSTM1-202ENST00000504227 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.26■□□□□ 0.19
CYSTM1-202ENST00000504227 PICK1Q9NRD5 415 aa16.26■□□□□ 0.19
CYSTM1-202ENST00000504227 MTMR4Q9NYA4 1195 aa16.26■□□□□ 0.19
CYSTM1-202ENST00000504227 STX8Q9UNK0 236 aa16.26■□□□□ 0.19
CYSTM1-202ENST00000504227 CSADQ9Y600 493 aa16.26■□□□□ 0.19
CYSTM1-202ENST00000504227 CCDC69A6NI79 296 aa16.25■□□□□ 0.19
CYSTM1-202ENST00000504227 TTLL1O95922 423 aa16.25■□□□□ 0.19
CYSTM1-202ENST00000504227 LIFRP42702 1097 aa16.25■□□□□ 0.19
CYSTM1-202ENST00000504227 MCM2P49736 904 aa16.25■□□□□ 0.19
CYSTM1-202ENST00000504227 JAG1P78504 1218 aa16.25■□□□□ 0.19
CYSTM1-202ENST00000504227 ATP2B2Q01814 1243 aa16.25■□□□□ 0.19
CYSTM1-202ENST00000504227 SEC23AQ15436 765 aa16.25■□□□□ 0.19
CYSTM1-202ENST00000504227 SHROOM1Q2M3G4 852 aaPredicted RBP16.25■□□□□ 0.19
CYSTM1-202ENST00000504227 ANKRD13AQ8IZ07 590 aa16.25■□□□□ 0.19
CYSTM1-202ENST00000504227 BRF1Q92994 677 aa16.25■□□□□ 0.19
CYSTM1-202ENST00000504227 LY9Q9HBG7 655 aa16.25■□□□□ 0.19
CYSTM1-202ENST00000504227 GBA2Q9HCG7 927 aaPredicted RBP16.25■□□□□ 0.19
CYSTM1-202ENST00000504227 GPHNQ9NQX3 736 aaPredicted RBP16.25■□□□□ 0.19
CYSTM1-202ENST00000504227 CLIP2Q9UDT6 1046 aa16.25■□□□□ 0.19
CYSTM1-202ENST00000504227 RBM19Q9Y4C8 960 aaKnown RBP16.25■□□□□ 0.19
CYSTM1-202ENST00000504227 MYH8P13535 1937 aa16.25■□□□□ 0.19
CYSTM1-202ENST00000504227 UNCXA6NJT0 531 aa16.24■□□□□ 0.19
CYSTM1-202ENST00000504227 UBE2Q2LH0YL09 131 aa16.24■□□□□ 0.19
CYSTM1-202ENST00000504227 TOP1P11387 765 aaKnown RBP16.24■□□□□ 0.19
CYSTM1-202ENST00000504227 GUCY1A2P33402 732 aa16.24■□□□□ 0.19
CYSTM1-202ENST00000504227 ICA1Q05084 483 aa16.24■□□□□ 0.19
CYSTM1-202ENST00000504227 TOB2Q14106 344 aaPredicted RBP16.24■□□□□ 0.19
CYSTM1-202ENST00000504227 NOL9Q5SY16 702 aaKnown RBP16.24■□□□□ 0.19
CYSTM1-202ENST00000504227 RCSD1Q6JBY9 416 aa16.24■□□□□ 0.19
CYSTM1-202ENST00000504227 SYNE3Q6ZMZ3 975 aa16.24■□□□□ 0.19
CYSTM1-202ENST00000504227 MOB2Q70IA6 237 aa16.24■□□□□ 0.19
CYSTM1-202ENST00000504227 AGXT2Q9BYV1 514 aa16.24■□□□□ 0.19
CYSTM1-202ENST00000504227 KAT14Q9H8E8 782 aa16.24■□□□□ 0.19
CYSTM1-202ENST00000504227 NYAP2Q9P242 653 aa16.24■□□□□ 0.19
CYSTM1-202ENST00000504227 USP17L5A8MUK1 530 aa16.23■□□□□ 0.19
CYSTM1-202ENST00000504227 ANP32AP39687 249 aaKnown RBP16.23■□□□□ 0.19
CYSTM1-202ENST00000504227 FSTL1Q12841 308 aa16.23■□□□□ 0.19
CYSTM1-202ENST00000504227 LDLRAD1Q5T700 205 aa16.23■□□□□ 0.19
CYSTM1-202ENST00000504227 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.23■□□□□ 0.19
CYSTM1-202ENST00000504227 CATIPQ7Z7H3 387 aa16.23■□□□□ 0.19
CYSTM1-202ENST00000504227 SGMS1Q86VZ5 419 aa16.23■□□□□ 0.19
CYSTM1-202ENST00000504227 SNX21Q969T3 373 aa16.23■□□□□ 0.19
CYSTM1-202ENST00000504227 ARHGEF10LQ9HCE6 1279 aa16.23■□□□□ 0.19
CYSTM1-202ENST00000504227 NAP1L2Q9ULW6 460 aaPredicted RBP16.23■□□□□ 0.19
CYSTM1-202ENST00000504227 LIMCH1Q9UPQ0 1083 aa16.23■□□□□ 0.19
CYSTM1-202ENST00000504227 KLF18A0A0U1RQI7 1052 aa16.22■□□□□ 0.19
CYSTM1-202ENST00000504227 EEF2P13639 858 aaKnown RBP16.22■□□□□ 0.19
CYSTM1-202ENST00000504227 NOVP48745 357 aa16.22■□□□□ 0.19
CYSTM1-202ENST00000504227 APOBRQ0VD83 1088 aa16.22■□□□□ 0.19
CYSTM1-202ENST00000504227 VGLL4Q14135 290 aa16.22■□□□□ 0.19
CYSTM1-202ENST00000504227 CST9Q5W186 159 aa16.22■□□□□ 0.19
CYSTM1-202ENST00000504227 NOL8Q76FK4 1167 aaKnown RBP16.22■□□□□ 0.19
CYSTM1-202ENST00000504227 CLEC10AQ8IUN9 316 aa16.22■□□□□ 0.19
CYSTM1-202ENST00000504227 MKL1Q969V6 931 aa16.22■□□□□ 0.19
CYSTM1-202ENST00000504227 ZSCAN31Q96LW9 406 aaPredicted RBP16.22■□□□□ 0.19
CYSTM1-202ENST00000504227 TMEM47Q9BQJ4 181 aa16.22■□□□□ 0.19
CYSTM1-202ENST00000504227 TBC1D2Q9BYX2 928 aa16.22■□□□□ 0.19
CYSTM1-202ENST00000504227 AS3MTQ9HBK9 375 aa16.22■□□□□ 0.19
CYSTM1-202ENST00000504227 SENP2Q9HC62 589 aa16.22■□□□□ 0.19
CYSTM1-202ENST00000504227 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.22■□□□□ 0.19
CYSTM1-202ENST00000504227 SLC12A7Q9Y666 1083 aa16.22■□□□□ 0.19
CYSTM1-202ENST00000504227 PASKQ96RG2 1323 aa16.21■□□□□ 0.19
CYSTM1-202ENST00000504227 PTPRAP18433 802 aa16.21■□□□□ 0.19
CYSTM1-202ENST00000504227 EVCP57679 992 aa16.21■□□□□ 0.19
CYSTM1-202ENST00000504227 SIAH1Q8IUQ4 282 aa16.21■□□□□ 0.19
CYSTM1-202ENST00000504227 HSCBQ8IWL3 235 aa16.21■□□□□ 0.19
CYSTM1-202ENST00000504227 SLC10A4Q96EP9 437 aa16.21■□□□□ 0.19
CYSTM1-202ENST00000504227 ZNF274Q96GC6 653 aaPredicted RBP16.21■□□□□ 0.19
CYSTM1-202ENST00000504227 LARP6Q9BRS8 491 aaKnown RBP16.21■□□□□ 0.19
CYSTM1-202ENST00000504227 SH2D4AQ9H788 454 aa16.21■□□□□ 0.19
CYSTM1-202ENST00000504227 BRPF3Q9ULD4 1205 aa16.21■□□□□ 0.19
CYSTM1-202ENST00000504227 SNCAIPQ9Y6H5 919 aa16.21■□□□□ 0.19
CYSTM1-202ENST00000504227 ZHX2Q9Y6X8 837 aa16.21■□□□□ 0.19
CYSTM1-202ENST00000504227 CD2BP2O95400 341 aaKnown RBP16.2■□□□□ 0.18
CYSTM1-202ENST00000504227 BECN1Q14457 450 aa16.2■□□□□ 0.18
CYSTM1-202ENST00000504227 PNMA1Q8ND90 353 aa16.2■□□□□ 0.18
CYSTM1-202ENST00000504227 CLMNQ96JQ2 1002 aa16.2■□□□□ 0.18
CYSTM1-202ENST00000504227 WDR18Q9BV38 432 aa16.2■□□□□ 0.18
CYSTM1-202ENST00000504227 ELP3Q9H9T3 547 aa16.2■□□□□ 0.18
CYSTM1-202ENST00000504227 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.2■□□□□ 0.18
CYSTM1-202ENST00000504227 TPCN1Q9ULQ1 816 aa16.2■□□□□ 0.18
CYSTM1-202ENST00000504227 SYNPO2Q9UMS6 1093 aa16.2■□□□□ 0.18
CYSTM1-202ENST00000504227 ZBTB43O43298 467 aa16.19■□□□□ 0.18
CYSTM1-202ENST00000504227 DDAH1O94760 285 aa16.19■□□□□ 0.18
CYSTM1-202ENST00000504227 CALM1P0DP23 149 aa16.19■□□□□ 0.18
CYSTM1-202ENST00000504227 CALM2P0DP24 149 aa16.19■□□□□ 0.18
CYSTM1-202ENST00000504227 CALM3P0DP25 149 aa16.19■□□□□ 0.18
CYSTM1-202ENST00000504227 PDIA3P30101 505 aaKnown RBP16.19■□□□□ 0.18
CYSTM1-202ENST00000504227 APOA5Q6Q788 366 aa16.19■□□□□ 0.18
CYSTM1-202ENST00000504227 CCDC84Q86UT8 332 aaPredicted RBP16.19■□□□□ 0.18
CYSTM1-202ENST00000504227 ERO1BQ86YB8 467 aa16.19■□□□□ 0.18
CYSTM1-202ENST00000504227 ZNF654Q8IZM8 581 aa16.19■□□□□ 0.18
CYSTM1-202ENST00000504227 LRRC47Q8N1G4 583 aaKnown RBP16.19■□□□□ 0.18
CYSTM1-202ENST00000504227 ZNF280CQ8ND82 737 aa16.19■□□□□ 0.18
CYSTM1-202ENST00000504227 ACER1Q8TDN7 264 aa16.19■□□□□ 0.18
CYSTM1-202ENST00000504227 NUP133Q8WUM0 1156 aa16.19■□□□□ 0.18
CYSTM1-202ENST00000504227 CHMP4CQ96CF2 233 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms