RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 A0A0G2JMZ2 1700 aa15.68■□□□□ 0.1
LSM6-204ENST00000504181 SKIV2LQ15477 1246 aaKnown RBP15.68■□□□□ 0.1
LSM6-204ENST00000504181 GTF3C2Q8WUA4 911 aaPredicted RBP15.68■□□□□ 0.1
LSM6-204ENST00000504181 WDR18Q9BV38 432 aa15.68■□□□□ 0.1
LSM6-204ENST00000504181 TMEM39AQ9NV64 488 aa15.68■□□□□ 0.1
LSM6-204ENST00000504181 IVNS1ABPQ9Y6Y0 642 aa15.68■□□□□ 0.1
LSM6-204ENST00000504181 CNMDO75829 334 aa15.67■□□□□ 0.1
LSM6-204ENST00000504181 HOXC6P09630 235 aa15.67■□□□□ 0.1
LSM6-204ENST00000504181 DZIP1Q86YF9 867 aaKnown RBP15.67■□□□□ 0.1
LSM6-204ENST00000504181 LPIN2Q92539 896 aa15.67■□□□□ 0.1
LSM6-204ENST00000504181 NKX2-4Q9H2Z4 354 aa15.67■□□□□ 0.1
LSM6-204ENST00000504181 MYH1P12882 1939 aa15.66■□□□□ 0.1
LSM6-204ENST00000504181 SMIM22K7EJ46 135 aa15.66■□□□□ 0.1
LSM6-204ENST00000504181 SEPT4O43236 478 aa15.66■□□□□ 0.1
LSM6-204ENST00000504181 NBPF7P0C2Y1 421 aaPredicted RBP15.66■□□□□ 0.1
LSM6-204ENST00000504181 CCNA1P78396 465 aa15.66■□□□□ 0.1
LSM6-204ENST00000504181 GRB14Q14449 540 aa15.66■□□□□ 0.1
LSM6-204ENST00000504181 FAM47AQ5JRC9 791 aa15.66■□□□□ 0.1
LSM6-204ENST00000504181 MSRAQ9UJ68 235 aa15.66■□□□□ 0.1
LSM6-204ENST00000504181 RABGAP1Q9Y3P9 1069 aa15.66■□□□□ 0.1
LSM6-204ENST00000504181 C19orf81C9J6K1 198 aa15.65■□□□□ 0.1
LSM6-204ENST00000504181 USP17L10C9JJH3 530 aa15.65■□□□□ 0.1
LSM6-204ENST00000504181 SHROOM1Q2M3G4 852 aaPredicted RBP15.65■□□□□ 0.1
LSM6-204ENST00000504181 TMEM240Q5SV17 173 aa15.65■□□□□ 0.1
LSM6-204ENST00000504181 SLC4A10Q6U841 1118 aa15.65■□□□□ 0.1
LSM6-204ENST00000504181 SLC44A5Q8NCS7 719 aa15.65■□□□□ 0.1
LSM6-204ENST00000504181 GNL3LQ9NVN8 582 aaKnown RBP15.65■□□□□ 0.1
LSM6-204ENST00000504181 PHF24Q9UPV7 400 aa15.65■□□□□ 0.1
LSM6-204ENST00000504181 COL11A1P12107 1806 aaPredicted RBP15.65■□□□□ 0.1
LSM6-204ENST00000504181 MROH7-TTC4A0A0A0MT08 1334 aa15.65■□□□□ 0.1
LSM6-204ENST00000504181 ERC2O15083 957 aa15.64■□□□□ 0.09
LSM6-204ENST00000504181 ALDH1L1O75891 902 aa15.64■□□□□ 0.09
LSM6-204ENST00000504181 IGHA2P01877 340 aa15.64■□□□□ 0.09
LSM6-204ENST00000504181 RHBDL3P58872 404 aa15.64■□□□□ 0.09
LSM6-204ENST00000504181 JAG1P78504 1218 aa15.64■□□□□ 0.09
LSM6-204ENST00000504181 FAAP100Q0VG06 881 aa15.64■□□□□ 0.09
LSM6-204ENST00000504181 RAB30Q15771 203 aa15.64■□□□□ 0.09
LSM6-204ENST00000504181 RABL6Q3YEC7 729 aaPredicted RBP15.64■□□□□ 0.09
LSM6-204ENST00000504181 PRAMEF19Q5SWL8 479 aa15.64■□□□□ 0.09
LSM6-204ENST00000504181 C16orf59Q7L2K0 433 aa15.64■□□□□ 0.09
LSM6-204ENST00000504181 SLF2Q8IX21 1173 aa15.64■□□□□ 0.09
LSM6-204ENST00000504181 ANKRD44Q8N8A2 993 aa15.64■□□□□ 0.09
LSM6-204ENST00000504181 SRCIN1Q9C0H9 1055 aa15.64■□□□□ 0.09
LSM6-204ENST00000504181 SLC28A3Q9HAS3 691 aa15.64■□□□□ 0.09
LSM6-204ENST00000504181 ABCF2Q9UG63 623 aa15.64■□□□□ 0.09
LSM6-204ENST00000504181 DENND2AQ9ULE3 1009 aa15.64■□□□□ 0.09
LSM6-204ENST00000504181 COL4A4P53420 1690 aaPredicted RBP15.63■□□□□ 0.09
LSM6-204ENST00000504181 MYO5AQ9Y4I1 1855 aaKnown RBP15.63■□□□□ 0.09
LSM6-204ENST00000504181 A0A1W2PQ45 241 aaPredicted RBP15.63■□□□□ 0.09
LSM6-204ENST00000504181 A0A1W2PQY0 241 aa15.63■□□□□ 0.09
LSM6-204ENST00000504181 ASNSP08243 561 aa15.63■□□□□ 0.09
LSM6-204ENST00000504181 RASIP1Q5U651 963 aa15.63■□□□□ 0.09
LSM6-204ENST00000504181 DPP9Q86TI2 863 aa15.63■□□□□ 0.09
LSM6-204ENST00000504181 ZGPATQ8N5A5 531 aaKnown RBP15.63■□□□□ 0.09
LSM6-204ENST00000504181 YBX2Q9Y2T7 364 aaKnown RBP15.63■□□□□ 0.09
LSM6-204ENST00000504181 BRWD1Q9NSI6 2320 aa15.63■□□□□ 0.09
LSM6-204ENST00000504181 PARP14Q460N5 1801 aa15.63■□□□□ 0.09
LSM6-204ENST00000504181 GDF11O95390 407 aa15.62■□□□□ 0.09
LSM6-204ENST00000504181 TIMP1P01033 207 aa15.62■□□□□ 0.09
LSM6-204ENST00000504181 PHKA1P46020 1223 aa15.62■□□□□ 0.09
LSM6-204ENST00000504181 NHLH1Q02575 133 aa15.62■□□□□ 0.09
LSM6-204ENST00000504181 PPIGQ13427 754 aaKnown RBP eCLIP15.62■□□□□ 0.09
LSM6-204ENST00000504181 OLFML2BQ68BL8 750 aa15.62■□□□□ 0.09
LSM6-204ENST00000504181 FAM163AQ96GL9 167 aaPredicted RBP15.62■□□□□ 0.09
LSM6-204ENST00000504181 EMILIN3Q9NT22 766 aa15.62■□□□□ 0.09
LSM6-204ENST00000504181 BTBD7Q9P203 1132 aa15.62■□□□□ 0.09
LSM6-204ENST00000504181 HERC5Q9UII4 1024 aaKnown RBP15.62■□□□□ 0.09
LSM6-204ENST00000504181 TLL1O43897 1013 aa15.61■□□□□ 0.09
LSM6-204ENST00000504181 ACRP10323 421 aa15.61■□□□□ 0.09
LSM6-204ENST00000504181 ZYXQ15942 572 aaKnown RBP15.61■□□□□ 0.09
LSM6-204ENST00000504181 MFSD5Q6N075 450 aa15.61■□□□□ 0.09
LSM6-204ENST00000504181 CCDC174Q6PII3 467 aa15.61■□□□□ 0.09
LSM6-204ENST00000504181 HERVK_113Q902F9 699 aa15.61■□□□□ 0.09
LSM6-204ENST00000504181 XPNPEP3Q9NQH7 507 aa15.61■□□□□ 0.09
LSM6-204ENST00000504181 USP34Q70CQ2 3546 aa15.61■□□□□ 0.09
LSM6-204ENST00000504181 GPR75-ASB3A0A0A6YYF3 556 aa15.6■□□□□ 0.09
LSM6-204ENST00000504181 DCDC2CA8MYV0 355 aa15.6■□□□□ 0.09
LSM6-204ENST00000504181 PRR33A8MZF0 331 aa15.6■□□□□ 0.09
LSM6-204ENST00000504181 PI4K2BG5E9Z4 385 aa15.6■□□□□ 0.09
LSM6-204ENST00000504181 APBB1O00213 710 aa15.6■□□□□ 0.09
LSM6-204ENST00000504181 SEMA3EO15041 775 aa15.6■□□□□ 0.09
LSM6-204ENST00000504181 CSF2RAP15509 400 aa15.6■□□□□ 0.09
LSM6-204ENST00000504181 ADORA2AP29274 412 aa15.6■□□□□ 0.09
LSM6-204ENST00000504181 ATP2B3Q16720 1220 aa15.6■□□□□ 0.09
LSM6-204ENST00000504181 USP17L2Q6R6M4 530 aa15.6■□□□□ 0.09
LSM6-204ENST00000504181 ZNF365Q70YC5 407 aa15.6■□□□□ 0.09
LSM6-204ENST00000504181 UIMC1Q96RL1 719 aa15.6■□□□□ 0.09
LSM6-204ENST00000504181 USP17L15C9J2P7 530 aa15.59■□□□□ 0.09
LSM6-204ENST00000504181 USP17L13C9JLJ4 530 aa15.59■□□□□ 0.09
LSM6-204ENST00000504181 USP17L11C9JVI0 530 aa15.59■□□□□ 0.09
LSM6-204ENST00000504181 USP17L18D6R9N7 530 aa15.59■□□□□ 0.09
LSM6-204ENST00000504181 USP17L22D6RA61 530 aa15.59■□□□□ 0.09
LSM6-204ENST00000504181 USP17L17D6RBQ6 530 aa15.59■□□□□ 0.09
LSM6-204ENST00000504181 USP17L19D6RCP7 530 aa15.59■□□□□ 0.09
LSM6-204ENST00000504181 USP17L20D6RJB6 530 aa15.59■□□□□ 0.09
LSM6-204ENST00000504181 EYA2O00167 538 aa15.59■□□□□ 0.09
LSM6-204ENST00000504181 VAMP4O75379 141 aa15.59■□□□□ 0.09
LSM6-204ENST00000504181 PGK1P00558 417 aa15.59■□□□□ 0.09
LSM6-204ENST00000504181 MECOMQ03112 1051 aa15.59■□□□□ 0.09
LSM6-204ENST00000504181 USP17L24Q0WX57 530 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms