RNA–Protein interactions for RNA: ENST00000503121.5

SYNE4-206, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-206ENST00000503121 TDO2P48775 406 aa14.4□□□□□ -0.1
SYNE4-206ENST00000503121 RGS19P49795 217 aa14.4□□□□□ -0.1
SYNE4-206ENST00000503121 NUCB1Q02818 461 aa14.4□□□□□ -0.1
SYNE4-206ENST00000503121 SLC9C1Q4G0N8 1177 aa14.4□□□□□ -0.1
SYNE4-206ENST00000503121 GIMAP6Q6P9H5 292 aa14.4□□□□□ -0.1
SYNE4-206ENST00000503121 TMEM179Q6ZVK1 233 aa14.4□□□□□ -0.1
SYNE4-206ENST00000503121 C16orf86Q6ZW13 317 aa14.4□□□□□ -0.1
SYNE4-206ENST00000503121 NBPF11Q86T75 865 aa14.4□□□□□ -0.1
SYNE4-206ENST00000503121 STK11IPQ8N1F8 1099 aa14.4□□□□□ -0.1
SYNE4-206ENST00000503121 CCDC17Q96LX7 622 aa14.4□□□□□ -0.1
SYNE4-206ENST00000503121 SEC62Q99442 399 aaKnown RBP14.4□□□□□ -0.1
SYNE4-206ENST00000503121 NACAP1Q9BZK3 213 aa14.4□□□□□ -0.1
SYNE4-206ENST00000503121 SRRDQ9UH36 339 aa14.4□□□□□ -0.1
SYNE4-206ENST00000503121 DDX60LQ5H9U9 1706 aaKnown RBP14.39□□□□□ -0.11
SYNE4-206ENST00000503121 PATL2C9JE40 543 aaKnown RBP14.39□□□□□ -0.11
SYNE4-206ENST00000503121 TNPO2O14787 897 aaKnown RBP14.39□□□□□ -0.11
SYNE4-206ENST00000503121 AKR1B1P15121 316 aa14.39□□□□□ -0.11
SYNE4-206ENST00000503121 GUCY1A2P33402 732 aa14.39□□□□□ -0.11
SYNE4-206ENST00000503121 MLLT1Q03111 559 aaPredicted RBP14.39□□□□□ -0.11
SYNE4-206ENST00000503121 FAM110CQ1W6H9 321 aa14.39□□□□□ -0.11
SYNE4-206ENST00000503121 SBK1Q52WX2 424 aa14.39□□□□□ -0.11
SYNE4-206ENST00000503121 ZMYM1Q5SVZ6 1142 aa14.39□□□□□ -0.11
SYNE4-206ENST00000503121 RAET1EQ8TD07 263 aa14.39□□□□□ -0.11
SYNE4-206ENST00000503121 P2RX7Q99572 595 aaKnown RBP14.39□□□□□ -0.11
SYNE4-206ENST00000503121 KIAA1683Q9H0B3 1180 aa14.39□□□□□ -0.11
SYNE4-206ENST00000503121 BAZ2AQ9UIF9 1905 aaKnown RBP14.39□□□□□ -0.11
SYNE4-206ENST00000503121 MYPNQ86TC9 1320 aa14.39□□□□□ -0.11
SYNE4-206ENST00000503121 TRIM6-TRIM34B2RNG4 842 aa14.38□□□□□ -0.11
SYNE4-206ENST00000503121 USP17L15C9J2P7 530 aa14.38□□□□□ -0.11
SYNE4-206ENST00000503121 USP17L13C9JLJ4 530 aa14.38□□□□□ -0.11
SYNE4-206ENST00000503121 USP17L11C9JVI0 530 aa14.38□□□□□ -0.11
SYNE4-206ENST00000503121 USP17L18D6R9N7 530 aa14.38□□□□□ -0.11
SYNE4-206ENST00000503121 USP17L22D6RA61 530 aa14.38□□□□□ -0.11
SYNE4-206ENST00000503121 USP17L17D6RBQ6 530 aa14.38□□□□□ -0.11
SYNE4-206ENST00000503121 USP17L19D6RCP7 530 aa14.38□□□□□ -0.11
SYNE4-206ENST00000503121 USP17L20D6RJB6 530 aa14.38□□□□□ -0.11
SYNE4-206ENST00000503121 USP17L24Q0WX57 530 aa14.38□□□□□ -0.11
SYNE4-206ENST00000503121 IFNL3Q8IZI9 196 aa14.38□□□□□ -0.11
SYNE4-206ENST00000503121 ARMC5Q96C12 935 aa14.38□□□□□ -0.11
SYNE4-206ENST00000503121 C12orf42Q96LP6 360 aa14.38□□□□□ -0.11
SYNE4-206ENST00000503121 MKNK2Q9HBH9 465 aa14.38□□□□□ -0.11
SYNE4-206ENST00000503121 LOC285556D6RIA3 1793 aa14.37□□□□□ -0.11
SYNE4-206ENST00000503121 MYCP01106 439 aaPredicted RBP14.37□□□□□ -0.11
SYNE4-206ENST00000503121 HERVK_113P62684 666 aa14.37□□□□□ -0.11
SYNE4-206ENST00000503121 ICA1Q05084 483 aa14.37□□□□□ -0.11
SYNE4-206ENST00000503121 PRKCZQ05513 592 aa14.37□□□□□ -0.11
SYNE4-206ENST00000503121 SH3TC2Q8TF17 1288 aa14.37□□□□□ -0.11
SYNE4-206ENST00000503121 RILPL2Q969X0 211 aa14.37□□□□□ -0.11
SYNE4-206ENST00000503121 COA7Q96BR5 231 aa14.37□□□□□ -0.11
SYNE4-206ENST00000503121 ARHGEF10LQ9HCE6 1279 aa14.37□□□□□ -0.11
SYNE4-206ENST00000503121 EPB41L4AQ9HCS5 686 aaPredicted RBP14.37□□□□□ -0.11
SYNE4-206ENST00000503121 ZSWIM8A7E2V4 1837 aa14.36□□□□□ -0.11
SYNE4-206ENST00000503121 A0A1W2PRG0 241 aa14.36□□□□□ -0.11
SYNE4-206ENST00000503121 VCAM1P19320 739 aa14.36□□□□□ -0.11
SYNE4-206ENST00000503121 ATP2B2Q01814 1243 aa14.36□□□□□ -0.11
SYNE4-206ENST00000503121 CATSPERGQ6ZRH7 1159 aa14.36□□□□□ -0.11
SYNE4-206ENST00000503121 CCDC129Q6ZRS4 1044 aa14.36□□□□□ -0.11
SYNE4-206ENST00000503121 CLEC10AQ8IUN9 316 aa14.36□□□□□ -0.11
SYNE4-206ENST00000503121 PLEKHM2Q8IWE5 1019 aa14.36□□□□□ -0.11
SYNE4-206ENST00000503121 CCAR1Q8IX12 1150 aaKnown RBP14.36□□□□□ -0.11
SYNE4-206ENST00000503121 GPRC5AQ8NFJ5 357 aa14.36□□□□□ -0.11
SYNE4-206ENST00000503121 GTF3C2Q8WUA4 911 aaPredicted RBP14.36□□□□□ -0.11
SYNE4-206ENST00000503121 ZNF333Q96JL9 665 aa14.36□□□□□ -0.11
SYNE4-206ENST00000503121 PAGR1Q9BTK6 254 aa14.36□□□□□ -0.11
SYNE4-206ENST00000503121 TMEM106CQ9BVX2 250 aa14.36□□□□□ -0.11
SYNE4-206ENST00000503121 NAPBQ9H115 298 aa14.36□□□□□ -0.11
SYNE4-206ENST00000503121 SH2D4AQ9H788 454 aa14.36□□□□□ -0.11
SYNE4-206ENST00000503121 ZNF287Q9HBT7 754 aa14.36□□□□□ -0.11
SYNE4-206ENST00000503121 BIN2Q9UBW5 565 aaPredicted RBP14.36□□□□□ -0.11
SYNE4-206ENST00000503121 GABRQQ9UN88 632 aa14.36□□□□□ -0.11
SYNE4-206ENST00000503121 PEX10O60683 326 aa14.35□□□□□ -0.11
SYNE4-206ENST00000503121 GRK4P32298 578 aa14.35□□□□□ -0.11
SYNE4-206ENST00000503121 FLT3LGP49771 235 aa14.35□□□□□ -0.11
SYNE4-206ENST00000503121 ZNF444Q8N0Y2 327 aaPredicted RBP14.35□□□□□ -0.11
SYNE4-206ENST00000503121 RPAP3Q9H6T3 665 aaPredicted RBP14.35□□□□□ -0.11
SYNE4-206ENST00000503121 KANSL2Q9H9L4 492 aa14.35□□□□□ -0.11
SYNE4-206ENST00000503121 TXNRD2Q9NNW7 524 aa14.35□□□□□ -0.11
SYNE4-206ENST00000503121 HELLSQ9NRZ9 838 aa14.35□□□□□ -0.11
SYNE4-206ENST00000503121 RBPJLQ9UBG7 517 aa14.35□□□□□ -0.11
SYNE4-206ENST00000503121 MORF4L1Q9UBU8 362 aa14.35□□□□□ -0.11
SYNE4-206ENST00000503121 KIAA0100Q14667 2235 aaKnown RBP14.35□□□□□ -0.11
SYNE4-206ENST00000503121 PRDM1O75626 825 aa14.34□□□□□ -0.11
SYNE4-206ENST00000503121 SLC3A2P08195 630 aaKnown RBP14.34□□□□□ -0.11
SYNE4-206ENST00000503121 RASA1P20936 1047 aa14.34□□□□□ -0.11
SYNE4-206ENST00000503121 SIAH1Q8IUQ4 282 aa14.34□□□□□ -0.11
SYNE4-206ENST00000503121 FAM227BQ96M60 508 aa14.34□□□□□ -0.11
SYNE4-206ENST00000503121 TANGO6Q9C0B7 1094 aa14.34□□□□□ -0.11
SYNE4-206ENST00000503121 OSBPL3Q9H4L5 887 aa14.34□□□□□ -0.11
SYNE4-206ENST00000503121 TMX2Q9Y320 296 aa14.34□□□□□ -0.11
SYNE4-206ENST00000503121 POTEFA5A3E0 1075 aa14.33□□□□□ -0.12
SYNE4-206ENST00000503121 RAD21O60216 631 aa14.33□□□□□ -0.12
SYNE4-206ENST00000503121 ADCY3O60266 1144 aa14.33□□□□□ -0.12
SYNE4-206ENST00000503121 EEF2P13639 858 aaKnown RBP14.33□□□□□ -0.12
SYNE4-206ENST00000503121 ERVK-9P63128 1117 aa14.33□□□□□ -0.12
SYNE4-206ENST00000503121 ERVK-24P63145 666 aa14.33□□□□□ -0.12
SYNE4-206ENST00000503121 Q3C1V9 767 aa14.33□□□□□ -0.12
SYNE4-206ENST00000503121 MCMDC2Q4G0Z9 681 aa14.33□□□□□ -0.12
SYNE4-206ENST00000503121 TICAM2Q86XR7 235 aa14.33□□□□□ -0.12
SYNE4-206ENST00000503121 SPICE1Q8N0Z3 855 aa14.33□□□□□ -0.12
SYNE4-206ENST00000503121 SLAIN1Q8ND83 568 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms