RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 NMIQ13287 307 aaPredicted RBP15.28■□□□□ 0.04
HSPG2-213ENST00000498495 OTOP1Q7RTM1 612 aa15.28■□□□□ 0.04
HSPG2-213ENST00000498495 ZNF444Q8N0Y2 327 aaPredicted RBP15.28■□□□□ 0.04
HSPG2-213ENST00000498495 ZNF287Q9HBT7 754 aa15.28■□□□□ 0.04
HSPG2-213ENST00000498495 EMILIN3Q9NT22 766 aa15.28■□□□□ 0.04
HSPG2-213ENST00000498495 DDX60LQ5H9U9 1706 aaKnown RBP15.27■□□□□ 0.04
HSPG2-213ENST00000498495 A0A0D9SFI3 127 aa15.27■□□□□ 0.04
HSPG2-213ENST00000498495 HIP1O00291 1037 aa15.27■□□□□ 0.04
HSPG2-213ENST00000498495 ECM2O94769 699 aaPredicted RBP15.27■□□□□ 0.04
HSPG2-213ENST00000498495 SLC3A2P08195 630 aaKnown RBP15.27■□□□□ 0.04
HSPG2-213ENST00000498495 HOXA7P31268 230 aaPredicted RBP15.27■□□□□ 0.04
HSPG2-213ENST00000498495 LACTBP83111 547 aaPredicted RBP15.27■□□□□ 0.04
HSPG2-213ENST00000498495 ZYXQ15942 572 aaKnown RBP15.27■□□□□ 0.04
HSPG2-213ENST00000498495 FBXO46Q6PJ61 603 aaPredicted RBP15.27■□□□□ 0.04
HSPG2-213ENST00000498495 ACER1Q8TDN7 264 aa15.27■□□□□ 0.04
HSPG2-213ENST00000498495 KIAA1683Q9H0B3 1180 aa15.27■□□□□ 0.04
HSPG2-213ENST00000498495 ADGRA2Q96PE1 1338 aa15.26■□□□□ 0.03
HSPG2-213ENST00000498495 CCDC85CA6NKD9 419 aa15.26■□□□□ 0.03
HSPG2-213ENST00000498495 BCRP11274 1271 aa15.26■□□□□ 0.03
HSPG2-213ENST00000498495 MFAP1P55081 439 aaKnown RBP15.26■□□□□ 0.03
HSPG2-213ENST00000498495 IRX3P78415 501 aaPredicted RBP15.26■□□□□ 0.03
HSPG2-213ENST00000498495 TTC22Q5TAA0 569 aa15.26■□□□□ 0.03
HSPG2-213ENST00000498495 ASCC2Q9H1I8 757 aaPredicted RBP15.26■□□□□ 0.03
HSPG2-213ENST00000498495 ARHGEF10LQ9HCE6 1279 aa15.26■□□□□ 0.03
HSPG2-213ENST00000498495 DIAPH3Q9NSV4 1193 aa15.26■□□□□ 0.03
HSPG2-213ENST00000498495 FMNL1O95466 1100 aaPredicted RBP15.25■□□□□ 0.03
HSPG2-213ENST00000498495 NEFLP07196 543 aa15.25■□□□□ 0.03
HSPG2-213ENST00000498495 PSMC4P43686 418 aa15.25■□□□□ 0.03
HSPG2-213ENST00000498495 GCLCP48506 637 aaPredicted RBP15.25■□□□□ 0.03
HSPG2-213ENST00000498495 PDE4BQ07343 736 aa15.25■□□□□ 0.03
HSPG2-213ENST00000498495 PPARAQ07869 468 aa15.25■□□□□ 0.03
HSPG2-213ENST00000498495 VPS53Q5VIR6 699 aa15.25■□□□□ 0.03
HSPG2-213ENST00000498495 CWC27Q6UX04 472 aaKnown RBP15.25■□□□□ 0.03
HSPG2-213ENST00000498495 ANKRD13CQ8N6S4 541 aa15.25■□□□□ 0.03
HSPG2-213ENST00000498495 C12orf42Q96LP6 360 aa15.25■□□□□ 0.03
HSPG2-213ENST00000498495 P2RX7Q99572 595 aaKnown RBP15.25■□□□□ 0.03
HSPG2-213ENST00000498495 KANSL2Q9H9L4 492 aa15.25■□□□□ 0.03
HSPG2-213ENST00000498495 PTPN22Q9Y2R2 807 aa15.25■□□□□ 0.03
HSPG2-213ENST00000498495 PTPRFP10586 1907 aa15.25■□□□□ 0.03
HSPG2-213ENST00000498495 A0A1W2PRG0 241 aa15.24■□□□□ 0.03
HSPG2-213ENST00000498495 USP17L15C9J2P7 530 aa15.24■□□□□ 0.03
HSPG2-213ENST00000498495 USP17L13C9JLJ4 530 aa15.24■□□□□ 0.03
HSPG2-213ENST00000498495 USP17L11C9JVI0 530 aa15.24■□□□□ 0.03
HSPG2-213ENST00000498495 USP17L18D6R9N7 530 aa15.24■□□□□ 0.03
HSPG2-213ENST00000498495 USP17L22D6RA61 530 aa15.24■□□□□ 0.03
HSPG2-213ENST00000498495 USP17L17D6RBQ6 530 aa15.24■□□□□ 0.03
HSPG2-213ENST00000498495 USP17L19D6RCP7 530 aa15.24■□□□□ 0.03
HSPG2-213ENST00000498495 USP17L20D6RJB6 530 aa15.24■□□□□ 0.03
HSPG2-213ENST00000498495 GNRH1P01148 92 aa15.24■□□□□ 0.03
HSPG2-213ENST00000498495 HSPD1P10809 573 aaKnown RBP15.24■□□□□ 0.03
HSPG2-213ENST00000498495 RASA1P20936 1047 aa15.24■□□□□ 0.03
HSPG2-213ENST00000498495 HOXD10P28358 340 aa15.24■□□□□ 0.03
HSPG2-213ENST00000498495 ATP2B2Q01814 1243 aa15.24■□□□□ 0.03
HSPG2-213ENST00000498495 ICA1Q05084 483 aa15.24■□□□□ 0.03
HSPG2-213ENST00000498495 USP17L24Q0WX57 530 aa15.24■□□□□ 0.03
HSPG2-213ENST00000498495 ALX1Q15699 326 aa15.24■□□□□ 0.03
HSPG2-213ENST00000498495 CENPQQ7L2Z9 268 aaPredicted RBP15.24■□□□□ 0.03
HSPG2-213ENST00000498495 ARHGAP39Q9C0H5 1083 aa15.24■□□□□ 0.03
HSPG2-213ENST00000498495 SH2D4AQ9H788 454 aa15.24■□□□□ 0.03
HSPG2-213ENST00000498495 HPS5Q9UPZ3 1129 aa15.24■□□□□ 0.03
HSPG2-213ENST00000498495 CCDC171Q6TFL3 1326 aa15.23■□□□□ 0.03
HSPG2-213ENST00000498495 PRDM1O75626 825 aa15.23■□□□□ 0.03
HSPG2-213ENST00000498495 FGAP02671 866 aa15.23■□□□□ 0.03
HSPG2-213ENST00000498495 EEF2P13639 858 aaKnown RBP15.23■□□□□ 0.03
HSPG2-213ENST00000498495 GSPT1P15170 499 aaKnown RBP15.23■□□□□ 0.03
HSPG2-213ENST00000498495 CAP1Q01518 475 aa15.23■□□□□ 0.03
HSPG2-213ENST00000498495 ZNF589Q86UQ0 364 aaPredicted RBP15.23■□□□□ 0.03
HSPG2-213ENST00000498495 SIAH1Q8IUQ4 282 aa15.23■□□□□ 0.03
HSPG2-213ENST00000498495 TMX2Q9Y320 296 aa15.23■□□□□ 0.03
HSPG2-213ENST00000498495 ROBO3Q96MS0 1386 aa15.23■□□□□ 0.03
HSPG2-213ENST00000498495 FOXP2O15409 715 aa15.22■□□□□ 0.03
HSPG2-213ENST00000498495 CENPBP07199 599 aaPredicted RBP15.22■□□□□ 0.03
HSPG2-213ENST00000498495 VCAM1P19320 739 aa15.22■□□□□ 0.03
HSPG2-213ENST00000498495 FCGRTP55899 365 aa15.22■□□□□ 0.03
HSPG2-213ENST00000498495 CTDSPL2Q05D32 466 aa15.22■□□□□ 0.03
HSPG2-213ENST00000498495 FAM110CQ1W6H9 321 aa15.22■□□□□ 0.03
HSPG2-213ENST00000498495 CATSPERGQ6ZRH7 1159 aa15.22■□□□□ 0.03
HSPG2-213ENST00000498495 CLEC10AQ8IUN9 316 aa15.22■□□□□ 0.03
HSPG2-213ENST00000498495 CCDC136Q96JN2 1154 aa15.22■□□□□ 0.03
HSPG2-213ENST00000498495 TSPY3P0CV98 308 aa15.21■□□□□ 0.03
HSPG2-213ENST00000498495 TSPY8P0CW00 308 aa15.21■□□□□ 0.03
HSPG2-213ENST00000498495 CTGFP29279 349 aa15.21■□□□□ 0.03
HSPG2-213ENST00000498495 PRMT2P55345 433 aa15.21■□□□□ 0.03
HSPG2-213ENST00000498495 HERVK_113P62684 666 aa15.21■□□□□ 0.03
HSPG2-213ENST00000498495 GTF3C2Q8WUA4 911 aaPredicted RBP15.21■□□□□ 0.03
HSPG2-213ENST00000498495 LPAR1Q92633 364 aa15.21■□□□□ 0.03
HSPG2-213ENST00000498495 TRIM47Q96LD4 638 aa15.21■□□□□ 0.03
HSPG2-213ENST00000498495 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.21■□□□□ 0.03
HSPG2-213ENST00000498495 RPAP3Q9H6T3 665 aaPredicted RBP15.21■□□□□ 0.03
HSPG2-213ENST00000498495 VCPKMTQ9H867 229 aa15.21■□□□□ 0.03
HSPG2-213ENST00000498495 ANAPC4Q9UJX5 808 aa15.21■□□□□ 0.03
HSPG2-213ENST00000498495 MYH8P13535 1937 aa15.2■□□□□ 0.02
HSPG2-213ENST00000498495 RAD21O60216 631 aa15.2■□□□□ 0.02
HSPG2-213ENST00000498495 TFAP4Q01664 338 aa15.2■□□□□ 0.02
HSPG2-213ENST00000498495 FAM47AQ5JRC9 791 aa15.2■□□□□ 0.02
HSPG2-213ENST00000498495 GPRC5AQ8NFJ5 357 aa15.2■□□□□ 0.02
HSPG2-213ENST00000498495 GOPCQ9HD26 462 aa15.2■□□□□ 0.02
HSPG2-213ENST00000498495 INCENPQ9NQS7 918 aa15.2■□□□□ 0.02
HSPG2-213ENST00000498495 NYAP2Q9P242 653 aa15.2■□□□□ 0.02
HSPG2-213ENST00000498495 SRRDQ9UH36 339 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms