RNA–Protein interactions for RNA: ENST00000498463.5

SNX13-212, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 687 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-212ENST00000498463 YARSP54577 528 aaKnown RBP10.99□□□□□ -0.65
SNX13-212ENST00000498463 LRRC41Q15345 812 aa10.99□□□□□ -0.65
SNX13-212ENST00000498463 PKDCCQ504Y2 493 aa10.99□□□□□ -0.65
SNX13-212ENST00000498463 ZC3H12AQ5D1E8 599 aaKnown RBP10.99□□□□□ -0.65
SNX13-212ENST00000498463 FAM117BQ6P1L5 589 aa10.99□□□□□ -0.65
SNX13-212ENST00000498463 DDX46Q7L014 1031 aaKnown RBP10.99□□□□□ -0.65
SNX13-212ENST00000498463 ZNF227Q86WZ6 799 aa10.99□□□□□ -0.65
SNX13-212ENST00000498463 SMC5Q8IY18 1101 aa10.99□□□□□ -0.65
SNX13-212ENST00000498463 SLFN12Q8IYM2 578 aa10.99□□□□□ -0.65
SNX13-212ENST00000498463 LEO1Q8WVC0 666 aaPredicted RBP10.99□□□□□ -0.65
SNX13-212ENST00000498463 APBA2Q99767 749 aa10.99□□□□□ -0.65
SNX13-212ENST00000498463 PCGF6Q9BYE7 350 aa10.99□□□□□ -0.65
SNX13-212ENST00000498463 WNT10AQ9GZT5 417 aa10.99□□□□□ -0.65
SNX13-212ENST00000498463 OSGEPQ9NPF4 335 aa10.99□□□□□ -0.65
SNX13-212ENST00000498463 LINC01387J3KSC0 135 aa10.98□□□□□ -0.65
SNX13-212ENST00000498463 DGAT1O75907 488 aa10.98□□□□□ -0.65
SNX13-212ENST00000498463 RGS9O75916 674 aaPredicted RBP10.98□□□□□ -0.65
SNX13-212ENST00000498463 DNAJC8O75937 253 aaPredicted RBP10.98□□□□□ -0.65
SNX13-212ENST00000498463 SCGB1D2O95969 90 aa10.98□□□□□ -0.65
SNX13-212ENST00000498463 TP53P04637 393 aaPredicted RBP10.98□□□□□ -0.65
SNX13-212ENST00000498463 ITGAVP06756 1048 aa10.98□□□□□ -0.65
SNX13-212ENST00000498463 BAG6P46379 1132 aa10.98□□□□□ -0.65
SNX13-212ENST00000498463 PHACTR4Q8IZ21 702 aa10.98□□□□□ -0.65
SNX13-212ENST00000498463 DDX1Q92499 740 aaKnown RBP10.98□□□□□ -0.65
SNX13-212ENST00000498463 APEX2Q9UBZ4 518 aa10.98□□□□□ -0.65
SNX13-212ENST00000498463 SHTN1A0MZ66 631 aa10.97□□□□□ -0.65
SNX13-212ENST00000498463 EIF3JO75822 258 aaKnown RBP10.97□□□□□ -0.65
SNX13-212ENST00000498463 FGFR1P11362 822 aa10.97□□□□□ -0.65
SNX13-212ENST00000498463 RING1Q06587 406 aa10.97□□□□□ -0.65
SNX13-212ENST00000498463 GRIK5Q16478 980 aa10.97□□□□□ -0.65
SNX13-212ENST00000498463 MAP9Q49MG5 647 aa10.97□□□□□ -0.65
SNX13-212ENST00000498463 HEATR6Q6AI08 1181 aaKnown RBP10.97□□□□□ -0.65
SNX13-212ENST00000498463 NECAB2Q7Z6G3 386 aa10.97□□□□□ -0.65
SNX13-212ENST00000498463 NUDT8Q8WV74 236 aa10.97□□□□□ -0.65
SNX13-212ENST00000498463 PPP1R14AQ96A00 147 aa10.97□□□□□ -0.65
SNX13-212ENST00000498463 TJP2Q9UDY2 1190 aa10.97□□□□□ -0.65
SNX13-212ENST00000498463 HIF3AQ9Y2N7 669 aa10.97□□□□□ -0.65
SNX13-212ENST00000498463 PCDHGC5Q9Y5F6 944 aa10.97□□□□□ -0.65
SNX13-212ENST00000498463 CDC14CA4D256 554 aa10.96□□□□□ -0.65
SNX13-212ENST00000498463 RGS13O14921 159 aa10.96□□□□□ -0.65
SNX13-212ENST00000498463 FSCN2O14926 492 aa10.96□□□□□ -0.65
SNX13-212ENST00000498463 PABPC1P11940 636 aaKnown RBP10.96□□□□□ -0.65
SNX13-212ENST00000498463 STRN3Q13033 797 aa10.96□□□□□ -0.65
SNX13-212ENST00000498463 TRIM61Q5EBN2 209 aa10.96□□□□□ -0.65
SNX13-212ENST00000498463 FCHSD1Q86WN1 690 aa10.96□□□□□ -0.65
SNX13-212ENST00000498463 MCATQ8IVS2 390 aaKnown RBP10.96□□□□□ -0.65
SNX13-212ENST00000498463 LRRN4CLQ8ND94 238 aa10.96□□□□□ -0.65
SNX13-212ENST00000498463 OSBP2Q969R2 916 aa10.96□□□□□ -0.65
SNX13-212ENST00000498463 TMEM87BQ96K49 555 aa10.96□□□□□ -0.65
SNX13-212ENST00000498463 CARD10Q9BWT7 1032 aa10.96□□□□□ -0.65
SNX13-212ENST00000498463 LGR4Q9BXB1 951 aa10.96□□□□□ -0.65
SNX13-212ENST00000498463 KLHL25Q9H0H3 589 aa10.96□□□□□ -0.65
SNX13-212ENST00000498463 TRIM39Q9HCM9 518 aa10.96□□□□□ -0.65
SNX13-212ENST00000498463 C9IYK1 514 aa10.95□□□□□ -0.66
SNX13-212ENST00000498463 PRODHO43272 600 aa10.95□□□□□ -0.66
SNX13-212ENST00000498463 CBFA2T2O43439 604 aa10.95□□□□□ -0.66
SNX13-212ENST00000498463 UBOX5O94941 541 aa10.95□□□□□ -0.66
SNX13-212ENST00000498463 GRIA2P42262 883 aa10.95□□□□□ -0.66
SNX13-212ENST00000498463 NEK2P51955 445 aa10.95□□□□□ -0.66
SNX13-212ENST00000498463 MMRN1Q13201 1228 aa10.95□□□□□ -0.66
SNX13-212ENST00000498463 BIRC2Q13490 618 aa10.95□□□□□ -0.66
SNX13-212ENST00000498463 NSMFQ6X4W1 530 aa10.95□□□□□ -0.66
SNX13-212ENST00000498463 USP26Q9BXU7 913 aa10.95□□□□□ -0.66
SNX13-212ENST00000498463 RAB27AP51159 221 aa10.94□□□□□ -0.66
SNX13-212ENST00000498463 MTMR1Q13613 665 aa10.94□□□□□ -0.66
SNX13-212ENST00000498463 PPM1JQ5JR12 505 aa10.94□□□□□ -0.66
SNX13-212ENST00000498463 ZBTB37Q5TC79 503 aa10.94□□□□□ -0.66
SNX13-212ENST00000498463 PKN3Q6P5Z2 889 aa10.94□□□□□ -0.66
SNX13-212ENST00000498463 LHFPL2Q6ZUX7 228 aa10.94□□□□□ -0.66
SNX13-212ENST00000498463 AHI1Q8N157 1196 aa10.94□□□□□ -0.66
SNX13-212ENST00000498463 ZNF513Q8N8E2 541 aaPredicted RBP10.94□□□□□ -0.66
SNX13-212ENST00000498463 WDR66Q8TBY9 1149 aa10.94□□□□□ -0.66
SNX13-212ENST00000498463 RPS6KC1Q96S38 1066 aa10.94□□□□□ -0.66
SNX13-212ENST00000498463 SMAD5Q99717 465 aaKnown RBP10.94□□□□□ -0.66
SNX13-212ENST00000498463 WDR18Q9BV38 432 aa10.94□□□□□ -0.66
SNX13-212ENST00000498463 PHLDB1Q86UU1 1377 aa10.93□□□□□ -0.66
SNX13-212ENST00000498463 ELOA3CA0A087WX78 387 aaPredicted RBP10.93□□□□□ -0.66
SNX13-212ENST00000498463 ELOA3DA6NLF2 546 aaPredicted RBP10.93□□□□□ -0.66
SNX13-212ENST00000498463 ST8SIA5O15466 376 aa10.93□□□□□ -0.66
SNX13-212ENST00000498463 TBX1O43435 398 aa10.93□□□□□ -0.66
SNX13-212ENST00000498463 CAPNS1P04632 268 aa10.93□□□□□ -0.66
SNX13-212ENST00000498463 C6orf222P0C671 652 aaPredicted RBP10.93□□□□□ -0.66
SNX13-212ENST00000498463 POU3F2P20265 443 aaPredicted RBP10.93□□□□□ -0.66
SNX13-212ENST00000498463 ERVK-24P63145 666 aa10.93□□□□□ -0.66
SNX13-212ENST00000498463 UBE4AQ14139 1066 aa10.93□□□□□ -0.66
SNX13-212ENST00000498463 ELOA3BQ3SY89 546 aa10.93□□□□□ -0.66
SNX13-212ENST00000498463 HP1BP3Q5SSJ5 553 aaPredicted RBP10.93□□□□□ -0.66
SNX13-212ENST00000498463 BRAPQ7Z569 592 aa10.93□□□□□ -0.66
SNX13-212ENST00000498463 MRPL41Q8IXM3 137 aaKnown RBP10.93□□□□□ -0.66
SNX13-212ENST00000498463 ELOA3Q8NG57 546 aa10.93□□□□□ -0.66
SNX13-212ENST00000498463 SLC7A14Q8TBB6 771 aa10.93□□□□□ -0.66
SNX13-212ENST00000498463 SMARCC1Q92922 1105 aaPredicted RBP10.93□□□□□ -0.66
SNX13-212ENST00000498463 MTMR8Q96EF0 704 aa10.93□□□□□ -0.66
SNX13-212ENST00000498463 FGD4Q96M96 766 aa10.93□□□□□ -0.66
SNX13-212ENST00000498463 SPOCK3Q9BQ16 436 aa10.93□□□□□ -0.66
SNX13-212ENST00000498463 JPH1Q9HDC5 661 aaPredicted RBP10.93□□□□□ -0.66
SNX13-212ENST00000498463 PICK1Q9NRD5 415 aa10.93□□□□□ -0.66
SNX13-212ENST00000498463 SLC5A4Q9NY91 659 aa10.93□□□□□ -0.66
SNX13-212ENST00000498463 LOC100289279A0A1B0GTE1 492 aa10.92□□□□□ -0.66
SNX13-212ENST00000498463 NEURL1BA8MQ27 555 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms