RNA–Protein interactions for RNA: ENST00000498347.1

FAM3D-205, Transcript of family with sequence similarity 3 member D, humanhuman

TSL 2

Gene FAM3D, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-205ENST00000498347 FAAP100Q0VG06 881 aa11.23□□□□□ -0.61
FAM3D-205ENST00000498347 MTMR2Q13614 643 aa11.23□□□□□ -0.61
FAM3D-205ENST00000498347 PUM3Q15397 648 aaKnown RBP11.23□□□□□ -0.61
FAM3D-205ENST00000498347 TWISTNBQ3B726 338 aaPredicted RBP11.23□□□□□ -0.61
FAM3D-205ENST00000498347 WDR78Q5VTH9 848 aa11.23□□□□□ -0.61
FAM3D-205ENST00000498347 ANO1Q5XXA6 986 aa11.23□□□□□ -0.61
FAM3D-205ENST00000498347 MFSD5Q6N075 450 aa11.23□□□□□ -0.61
FAM3D-205ENST00000498347 DPP9Q86TI2 863 aa11.23□□□□□ -0.61
FAM3D-205ENST00000498347 MICALL1Q8N3F8 863 aa11.23□□□□□ -0.61
FAM3D-205ENST00000498347 DDX4Q9NQI0 724 aaKnown RBP11.23□□□□□ -0.61
FAM3D-205ENST00000498347 GNL3LQ9NVN8 582 aaKnown RBP11.23□□□□□ -0.61
FAM3D-205ENST00000498347 FAM196BA6NMK8 535 aa11.22□□□□□ -0.61
FAM3D-205ENST00000498347 PQBP1O60828 265 aaKnown RBP11.22□□□□□ -0.61
FAM3D-205ENST00000498347 SLC5A1P13866 664 aa11.22□□□□□ -0.61
FAM3D-205ENST00000498347 POU3F3P20264 500 aaPredicted RBP11.22□□□□□ -0.61
FAM3D-205ENST00000498347 GRB14Q14449 540 aa11.22□□□□□ -0.61
FAM3D-205ENST00000498347 RRP1BQ14684 758 aaKnown RBP11.22□□□□□ -0.61
FAM3D-205ENST00000498347 RALBP1Q15311 655 aa11.22□□□□□ -0.61
FAM3D-205ENST00000498347 OLFML2BQ68BL8 750 aa11.22□□□□□ -0.61
FAM3D-205ENST00000498347 ZNF365Q70YC5 407 aa11.22□□□□□ -0.61
FAM3D-205ENST00000498347 ANKRD33Q7Z3H0 272 aa11.22□□□□□ -0.61
FAM3D-205ENST00000498347 NKX2-4Q9H2Z4 354 aa11.22□□□□□ -0.61
FAM3D-205ENST00000498347 SALL1Q9NSC2 1324 aa11.22□□□□□ -0.61
FAM3D-205ENST00000498347 DOCK1Q14185 1865 aa11.21□□□□□ -0.61
FAM3D-205ENST00000498347 PLXNA1Q9UIW2 1896 aa11.21□□□□□ -0.61
FAM3D-205ENST00000498347 GAKO14976 1311 aa11.21□□□□□ -0.61
FAM3D-205ENST00000498347 F6X3S4 739 aa11.21□□□□□ -0.61
FAM3D-205ENST00000498347 STRNO43815 780 aa11.21□□□□□ -0.61
FAM3D-205ENST00000498347 ASNSP08243 561 aa11.21□□□□□ -0.61
FAM3D-205ENST00000498347 ZGPATQ8N5A5 531 aaKnown RBP11.21□□□□□ -0.61
FAM3D-205ENST00000498347 LPIN2Q92539 896 aa11.21□□□□□ -0.61
FAM3D-205ENST00000498347 UIMC1Q96RL1 719 aa11.21□□□□□ -0.61
FAM3D-205ENST00000498347 DENND2AQ9ULE3 1009 aa11.21□□□□□ -0.61
FAM3D-205ENST00000498347 APAF1O14727 1248 aa11.2□□□□□ -0.62
FAM3D-205ENST00000498347 GTPBP6O43824 516 aaPredicted RBP11.2□□□□□ -0.62
FAM3D-205ENST00000498347 CNMDO75829 334 aa11.2□□□□□ -0.62
FAM3D-205ENST00000498347 MAP4K4O95819 1239 aaPredicted RBP11.2□□□□□ -0.62
FAM3D-205ENST00000498347 PRAMEF19Q5SWL8 479 aa11.2□□□□□ -0.62
FAM3D-205ENST00000498347 RNF180Q86T96 592 aa11.2□□□□□ -0.62
FAM3D-205ENST00000498347 TMEM199Q8N511 208 aa11.2□□□□□ -0.62
FAM3D-205ENST00000498347 HLA-CQ95604 372 aa11.2□□□□□ -0.62
FAM3D-205ENST00000498347 KAZALD1Q96I82 304 aa11.2□□□□□ -0.62
FAM3D-205ENST00000498347 FBXL18Q96ME1 805 aa11.2□□□□□ -0.62
FAM3D-205ENST00000498347 MTIF3Q9H2K0 278 aaKnown RBP11.2□□□□□ -0.62
FAM3D-205ENST00000498347 GINM1Q9NU53 330 aa11.2□□□□□ -0.62
FAM3D-205ENST00000498347 SLC5A4Q9NY91 659 aa11.2□□□□□ -0.62
FAM3D-205ENST00000498347 HERC5Q9UII4 1024 aaKnown RBP11.2□□□□□ -0.62
FAM3D-205ENST00000498347 FRMPD3Q5JV73 1810 aa11.19□□□□□ -0.62
FAM3D-205ENST00000498347 USP17L15C9J2P7 530 aa11.19□□□□□ -0.62
FAM3D-205ENST00000498347 USP17L13C9JLJ4 530 aa11.19□□□□□ -0.62
FAM3D-205ENST00000498347 USP17L11C9JVI0 530 aa11.19□□□□□ -0.62
FAM3D-205ENST00000498347 USP17L18D6R9N7 530 aa11.19□□□□□ -0.62
FAM3D-205ENST00000498347 USP17L22D6RA61 530 aa11.19□□□□□ -0.62
FAM3D-205ENST00000498347 USP17L17D6RBQ6 530 aa11.19□□□□□ -0.62
FAM3D-205ENST00000498347 USP17L19D6RCP7 530 aa11.19□□□□□ -0.62
FAM3D-205ENST00000498347 USP17L20D6RJB6 530 aa11.19□□□□□ -0.62
FAM3D-205ENST00000498347 SEMA3EO15041 775 aa11.19□□□□□ -0.62
FAM3D-205ENST00000498347 ALDH1L1O75891 902 aa11.19□□□□□ -0.62
FAM3D-205ENST00000498347 ALADP13716 330 aa11.19□□□□□ -0.62
FAM3D-205ENST00000498347 BTDP43251 543 aa11.19□□□□□ -0.62
FAM3D-205ENST00000498347 USP17L24Q0WX57 530 aa11.19□□□□□ -0.62
FAM3D-205ENST00000498347 CSPP1Q1MSJ5 1256 aa11.19□□□□□ -0.62
FAM3D-205ENST00000498347 PSRC1Q6PGN9 363 aaPredicted RBP11.19□□□□□ -0.62
FAM3D-205ENST00000498347 USP17L2Q6R6M4 530 aa11.19□□□□□ -0.62
FAM3D-205ENST00000498347 SUCLG2Q96I99 432 aa11.19□□□□□ -0.62
FAM3D-205ENST00000498347 TSEN34Q9BSV6 310 aaKnown RBP11.19□□□□□ -0.62
FAM3D-205ENST00000498347 EMILIN3Q9NT22 766 aa11.19□□□□□ -0.62
FAM3D-205ENST00000498347 PRRC2BQ5JSZ5 2229 aaKnown RBP11.19□□□□□ -0.62
FAM3D-205ENST00000498347 LOC285556D6RIA3 1793 aa11.18□□□□□ -0.62
FAM3D-205ENST00000498347 ZNF521Q96K83 1311 aa11.18□□□□□ -0.62
FAM3D-205ENST00000498347 GPR75-ASB3A0A0A6YYF3 556 aa11.18□□□□□ -0.62
FAM3D-205ENST00000498347 A0A1W2PQ45 241 aaPredicted RBP11.18□□□□□ -0.62
FAM3D-205ENST00000498347 A0A1W2PQY0 241 aa11.18□□□□□ -0.62
FAM3D-205ENST00000498347 ST18O60284 1047 aa11.18□□□□□ -0.62
FAM3D-205ENST00000498347 FGBP02675 491 aa11.18□□□□□ -0.62
FAM3D-205ENST00000498347 RARBP10826 455 aa11.18□□□□□ -0.62
FAM3D-205ENST00000498347 CSF2RAP15509 400 aa11.18□□□□□ -0.62
FAM3D-205ENST00000498347 CCDC184Q52MB2 194 aa11.18□□□□□ -0.62
FAM3D-205ENST00000498347 FAM47AQ5JRC9 791 aa11.18□□□□□ -0.62
FAM3D-205ENST00000498347 SPTY2D1Q68D10 685 aaPredicted RBP11.18□□□□□ -0.62
FAM3D-205ENST00000498347 ERICH6Q7L0X2 663 aa11.18□□□□□ -0.62
FAM3D-205ENST00000498347 DZIP1Q86YF9 867 aaKnown RBP11.18□□□□□ -0.62
FAM3D-205ENST00000498347 NUP133Q8WUM0 1156 aa11.18□□□□□ -0.62
FAM3D-205ENST00000498347 TSR2Q969E8 191 aaKnown RBP11.18□□□□□ -0.62
FAM3D-205ENST00000498347 CD320Q9NPF0 282 aa11.18□□□□□ -0.62
FAM3D-205ENST00000498347 XPNPEP3Q9NQH7 507 aa11.18□□□□□ -0.62
FAM3D-205ENST00000498347 PI4KBQ9UBF8 816 aa11.18□□□□□ -0.62
FAM3D-205ENST00000498347 YBX2Q9Y2T7 364 aaKnown RBP11.18□□□□□ -0.62
FAM3D-205ENST00000498347 MTCH2Q9Y6C9 303 aa11.18□□□□□ -0.62
FAM3D-205ENST00000498347 DOCK2Q92608 1830 aa11.18□□□□□ -0.62
FAM3D-205ENST00000498347 RFX7Q2KHR2 1363 aa11.17□□□□□ -0.62
FAM3D-205ENST00000498347 ACRP10323 421 aa11.17□□□□□ -0.62
FAM3D-205ENST00000498347 RHBDL3P58872 404 aa11.17□□□□□ -0.62
FAM3D-205ENST00000498347 RABL6Q3YEC7 729 aaPredicted RBP11.17□□□□□ -0.62
FAM3D-205ENST00000498347 CATSPERGQ6ZRH7 1159 aa11.17□□□□□ -0.62
FAM3D-205ENST00000498347 FOXP4Q8IVH2 680 aaPredicted RBP11.17□□□□□ -0.62
FAM3D-205ENST00000498347 FAM9BQ8IZU0 186 aa11.17□□□□□ -0.62
FAM3D-205ENST00000498347 TBX21Q9UL17 535 aa11.17□□□□□ -0.62
FAM3D-205ENST00000498347 ZBTB22O15209 634 aa11.16□□□□□ -0.62
FAM3D-205ENST00000498347 COBLO75128 1261 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms