RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 PRKCQQ04759 706 aa7.76□□□□□ -1.17
SSR3-209ENST00000498205 GNL2Q13823 731 aaKnown RBP7.76□□□□□ -1.17
SSR3-209ENST00000498205 GK5Q6ZS86 529 aa7.76□□□□□ -1.17
SSR3-209ENST00000498205 MFSD4AQ8N468 514 aa7.76□□□□□ -1.17
SSR3-209ENST00000498205 PIWIL2Q8TC59 973 aaKnown RBP7.76□□□□□ -1.17
SSR3-209ENST00000498205 XAGE3Q8WTP9 111 aa7.76□□□□□ -1.17
SSR3-209ENST00000498205 DPH2Q9BQC3 489 aaPredicted RBP7.76□□□□□ -1.17
SSR3-209ENST00000498205 CCDC39Q9UFE4 941 aa7.76□□□□□ -1.17
SSR3-209ENST00000498205 ZNRF3Q9ULT6 936 aa7.76□□□□□ -1.17
SSR3-209ENST00000498205 MED26O95402 600 aa7.75□□□□□ -1.17
SSR3-209ENST00000498205 RAG1P15918 1043 aa7.75□□□□□ -1.17
SSR3-209ENST00000498205 GBP1P32455 592 aa7.75□□□□□ -1.17
SSR3-209ENST00000498205 AGBL5Q8NDL9 886 aa7.75□□□□□ -1.17
SSR3-209ENST00000498205 TMEM40Q8WWA1 233 aa7.75□□□□□ -1.17
SSR3-209ENST00000498205 ASB11Q8WXH4 323 aa7.75□□□□□ -1.17
SSR3-209ENST00000498205 ZNF428Q96B54 188 aa7.75□□□□□ -1.17
SSR3-209ENST00000498205 HRASLS5Q96KN8 279 aa7.75□□□□□ -1.17
SSR3-209ENST00000498205 FERD3LQ96RJ6 166 aa7.75□□□□□ -1.17
SSR3-209ENST00000498205 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.75□□□□□ -1.17
SSR3-209ENST00000498205 KCNH3Q9ULD8 1083 aa7.75□□□□□ -1.17
SSR3-209ENST00000498205 SLC5A6Q9Y289 635 aa7.75□□□□□ -1.17
SSR3-209ENST00000498205 UPK3BL1B0FP48 263 aa7.74□□□□□ -1.17
SSR3-209ENST00000498205 CHURC1-FNTBB4DL54 471 aa7.74□□□□□ -1.17
SSR3-209ENST00000498205 UPK3BL2E5RIL1 263 aa7.74□□□□□ -1.17
SSR3-209ENST00000498205 RGS13O14921 159 aa7.74□□□□□ -1.17
SSR3-209ENST00000498205 TNNI2P48788 182 aa7.74□□□□□ -1.17
SSR3-209ENST00000498205 CLCQ05315 142 aa7.74□□□□□ -1.17
SSR3-209ENST00000498205 C9orf131Q5VYM1 1079 aa7.74□□□□□ -1.17
SSR3-209ENST00000498205 INTS3Q68E01 1043 aaKnown RBP7.74□□□□□ -1.17
SSR3-209ENST00000498205 NLRC3Q7RTR2 1065 aa7.74□□□□□ -1.17
SSR3-209ENST00000498205 CDH24Q86UP0 819 aa7.74□□□□□ -1.17
SSR3-209ENST00000498205 VPS37DQ86XT2 251 aa7.74□□□□□ -1.17
SSR3-209ENST00000498205 RBBP8NLQ8NC74 664 aaPredicted RBP7.74□□□□□ -1.17
SSR3-209ENST00000498205 DNAJB8Q8NHS0 232 aa7.74□□□□□ -1.17
SSR3-209ENST00000498205 RNF141Q8WVD5 230 aa7.74□□□□□ -1.17
SSR3-209ENST00000498205 SEC16BQ96JE7 1060 aa7.74□□□□□ -1.17
SSR3-209ENST00000498205 ASPNQ9BXN1 380 aa7.74□□□□□ -1.17
SSR3-209ENST00000498205 CNNM2Q9H8M5 875 aa7.74□□□□□ -1.17
SSR3-209ENST00000498205 STRIP2Q9ULQ0 834 aa7.74□□□□□ -1.17
SSR3-209ENST00000498205 INPP5FQ9Y2H2 1132 aa7.74□□□□□ -1.17
SSR3-209ENST00000498205 FAM155AB1AL88 458 aaPredicted RBP7.73□□□□□ -1.17
SSR3-209ENST00000498205 SOX9P48436 509 aa7.73□□□□□ -1.17
SSR3-209ENST00000498205 RNF4P78317 190 aa7.73□□□□□ -1.17
SSR3-209ENST00000498205 PLD6Q8N2A8 252 aaKnown RBP7.73□□□□□ -1.17
SSR3-209ENST00000498205 TAB3Q8N5C8 712 aaPredicted RBP7.73□□□□□ -1.17
SSR3-209ENST00000498205 FAM181AQ8N9Y4 354 aa7.73□□□□□ -1.17
SSR3-209ENST00000498205 OR6P1Q8NGX9 317 aa7.73□□□□□ -1.17
SSR3-209ENST00000498205 RIN3Q8TB24 985 aa7.73□□□□□ -1.17
SSR3-209ENST00000498205 ITIH2P19823 946 aa7.72□□□□□ -1.17
SSR3-209ENST00000498205 ARSHQ5FYA8 562 aa7.72□□□□□ -1.17
SSR3-209ENST00000498205 OVOS1Q6IE37 1185 aa7.72□□□□□ -1.17
SSR3-209ENST00000498205 THAP5Q7Z6K1 395 aa7.72□□□□□ -1.17
SSR3-209ENST00000498205 SPACA3Q8IXA5 215 aa7.72□□□□□ -1.17
SSR3-209ENST00000498205 PPP1R13LQ8WUF5 828 aa7.72□□□□□ -1.17
SSR3-209ENST00000498205 ATG4CQ96DT6 458 aa7.72□□□□□ -1.17
SSR3-209ENST00000498205 CRBNQ96SW2 442 aa7.72□□□□□ -1.17
SSR3-209ENST00000498205 TM9SF2Q99805 663 aa7.72□□□□□ -1.17
SSR3-209ENST00000498205 CCDC180Q9P1Z9 1646 aa7.71□□□□□ -1.17
SSR3-209ENST00000498205 TNFRSF10CO14798 259 aa7.71□□□□□ -1.18
SSR3-209ENST00000498205 NME1P15531 152 aaKnown RBP7.71□□□□□ -1.18
SSR3-209ENST00000498205 BCL7CQ8WUZ0 217 aaPredicted RBP7.71□□□□□ -1.18
SSR3-209ENST00000498205 TRIT1Q9H3H1 467 aaKnown RBP7.71□□□□□ -1.18
SSR3-209ENST00000498205 CAPN10Q9HC96 672 aa7.71□□□□□ -1.18
SSR3-209ENST00000498205 CAPN6Q9Y6Q1 641 aa7.71□□□□□ -1.18
SSR3-209ENST00000498205 AOC3Q16853 763 aa7.7□□□□□ -1.18
SSR3-209ENST00000498205 NKPD1Q17RQ9 610 aa7.7□□□□□ -1.18
SSR3-209ENST00000498205 FLCNQ8NFG4 579 aa7.7□□□□□ -1.18
SSR3-209ENST00000498205 DHRS1Q96LJ7 313 aa7.7□□□□□ -1.18
SSR3-209ENST00000498205 KIF2CQ99661 725 aa7.7□□□□□ -1.18
SSR3-209ENST00000498205 ACBD3Q9H3P7 528 aa7.7□□□□□ -1.18
SSR3-209ENST00000498205 IGSF5Q9NSI5 407 aa7.7□□□□□ -1.18
SSR3-209ENST00000498205 PLAGL2Q9UPG8 496 aa7.7□□□□□ -1.18
SSR3-209ENST00000498205 SLC12A7Q9Y666 1083 aa7.7□□□□□ -1.18
SSR3-209ENST00000498205 DNAJA2O60884 412 aa7.69□□□□□ -1.18
SSR3-209ENST00000498205 CBX7O95931 251 aa7.69□□□□□ -1.18
SSR3-209ENST00000498205 GP2P55259 537 aaKnown RBP7.69□□□□□ -1.18
SSR3-209ENST00000498205 ANGEL2Q5VTE6 544 aaKnown RBP7.69□□□□□ -1.18
SSR3-209ENST00000498205 TP53INP2Q8IXH6 220 aa7.69□□□□□ -1.18
SSR3-209ENST00000498205 BAHD1Q8TBE0 780 aaPredicted RBP7.69□□□□□ -1.18
SSR3-209ENST00000498205 KREMEN1Q96MU8 473 aa7.69□□□□□ -1.18
SSR3-209ENST00000498205 GINM1Q9NU53 330 aa7.69□□□□□ -1.18
SSR3-209ENST00000498205 EFR3BQ9Y2G0 817 aa7.69□□□□□ -1.18
SSR3-209ENST00000498205 EIF6P56537 245 aaKnown RBP7.68□□□□□ -1.18
SSR3-209ENST00000498205 FBXW10Q5XX13 1052 aa7.68□□□□□ -1.18
SSR3-209ENST00000498205 SRRTQ9BXP5 876 aaKnown RBP7.68□□□□□ -1.18
SSR3-209ENST00000498205 CLEC3AO75596 197 aa7.67□□□□□ -1.18
SSR3-209ENST00000498205 TNK2Q07912 1038 aa7.67□□□□□ -1.18
SSR3-209ENST00000498205 TMPRSS7Q7RTY8 843 aa7.67□□□□□ -1.18
SSR3-209ENST00000498205 SMARCC1Q92922 1105 aaPredicted RBP7.67□□□□□ -1.18
SSR3-209ENST00000498205 GPR62Q9BZJ7 368 aa7.67□□□□□ -1.18
SSR3-209ENST00000498205 ASCC2Q9H1I8 757 aaPredicted RBP7.67□□□□□ -1.18
SSR3-209ENST00000498205 GPATCH2Q9NW75 528 aa7.67□□□□□ -1.18
SSR3-209ENST00000498205 LMCD1Q9NZU5 365 aa7.67□□□□□ -1.18
SSR3-209ENST00000498205 ST14Q9Y5Y6 855 aa7.67□□□□□ -1.18
SSR3-209ENST00000498205 PITPNM2Q9BZ72 1349 aa7.67□□□□□ -1.18
SSR3-209ENST00000498205 PRR33A8MZF0 331 aa7.66□□□□□ -1.18
SSR3-209ENST00000498205 UBOX5O94941 541 aa7.66□□□□□ -1.18
SSR3-209ENST00000498205 ATF4P18848 351 aaPredicted RBP7.66□□□□□ -1.18
SSR3-209ENST00000498205 GUCY2CP25092 1073 aa7.66□□□□□ -1.18
SSR3-209ENST00000498205 BBS9Q3SYG4 887 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms