RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 KCNH4Q9UQ05 1017 aa13.49□□□□□ -0.25
ERCC8-208ENST00000497892 PCDHGA4Q9Y5G9 962 aa13.49□□□□□ -0.25
ERCC8-208ENST00000497892 LOC285556D6RIA3 1793 aa13.49□□□□□ -0.25
ERCC8-208ENST00000497892 CCL15-CCL14A0A0B4J2E2 113 aa13.48□□□□□ -0.25
ERCC8-208ENST00000497892 GSG1L2A8MUP6 293 aa13.48□□□□□ -0.25
ERCC8-208ENST00000497892 TRPA1O75762 1119 aa13.48□□□□□ -0.25
ERCC8-208ENST00000497892 NUDT7P0C024 238 aa13.48□□□□□ -0.25
ERCC8-208ENST00000497892 CYP2D6P10635 497 aa13.48□□□□□ -0.25
ERCC8-208ENST00000497892 CETPP11597 493 aa13.48□□□□□ -0.25
ERCC8-208ENST00000497892 CCL15Q16663 113 aa13.48□□□□□ -0.25
ERCC8-208ENST00000497892 GIMAP6Q6P9H5 292 aa13.48□□□□□ -0.25
ERCC8-208ENST00000497892 PTPN18Q99952 460 aa13.48□□□□□ -0.25
ERCC8-208ENST00000497892 CFHR5Q9BXR6 569 aa13.48□□□□□ -0.25
ERCC8-208ENST00000497892 EPB41L4AQ9HCS5 686 aaPredicted RBP13.48□□□□□ -0.25
ERCC8-208ENST00000497892 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.48□□□□□ -0.25
ERCC8-208ENST00000497892 ARPP21Q9UBL0 812 aaPredicted RBP13.48□□□□□ -0.25
ERCC8-208ENST00000497892 TSKSQ9UJT2 592 aa13.48□□□□□ -0.25
ERCC8-208ENST00000497892 ROBO3Q96MS0 1386 aa13.47□□□□□ -0.25
ERCC8-208ENST00000497892 USP17L12C9JPN9 530 aa13.47□□□□□ -0.25
ERCC8-208ENST00000497892 USP17L21D6R901 530 aa13.47□□□□□ -0.25
ERCC8-208ENST00000497892 ALDH1A1P00352 501 aa13.47□□□□□ -0.25
ERCC8-208ENST00000497892 ASNSP08243 561 aa13.47□□□□□ -0.25
ERCC8-208ENST00000497892 SHMT1P34896 483 aa13.47□□□□□ -0.25
ERCC8-208ENST00000497892 LBX1P52954 281 aa13.47□□□□□ -0.25
ERCC8-208ENST00000497892 TTC22Q5TAA0 569 aa13.47□□□□□ -0.25
ERCC8-208ENST00000497892 C12orf60Q5U649 245 aa13.47□□□□□ -0.25
ERCC8-208ENST00000497892 AMOTL1Q8IY63 956 aa13.47□□□□□ -0.25
ERCC8-208ENST00000497892 RILPL2Q969X0 211 aa13.47□□□□□ -0.25
ERCC8-208ENST00000497892 PRDM10Q9NQV6 1147 aa13.47□□□□□ -0.25
ERCC8-208ENST00000497892 HELLSQ9NRZ9 838 aa13.47□□□□□ -0.25
ERCC8-208ENST00000497892 GINM1Q9NU53 330 aa13.47□□□□□ -0.25
ERCC8-208ENST00000497892 ZBTB21Q9ULJ3 1066 aa13.47□□□□□ -0.25
ERCC8-208ENST00000497892 AFG3L2Q9Y4W6 797 aa13.47□□□□□ -0.25
ERCC8-208ENST00000497892 ZHX2Q9Y6X8 837 aa13.47□□□□□ -0.25
ERCC8-208ENST00000497892 CYP2D7A0A087X1C5 515 aa13.46□□□□□ -0.25
ERCC8-208ENST00000497892 A0A0D9SFI3 127 aa13.46□□□□□ -0.25
ERCC8-208ENST00000497892 CXCL11O14625 94 aa13.46□□□□□ -0.25
ERCC8-208ENST00000497892 GDF11O95390 407 aa13.46□□□□□ -0.25
ERCC8-208ENST00000497892 GSPT1P15170 499 aaKnown RBP13.46□□□□□ -0.25
ERCC8-208ENST00000497892 JAG1P78504 1218 aa13.46□□□□□ -0.25
ERCC8-208ENST00000497892 MOGSQ13724 837 aa13.46□□□□□ -0.25
ERCC8-208ENST00000497892 SHROOM1Q2M3G4 852 aaPredicted RBP13.46□□□□□ -0.25
ERCC8-208ENST00000497892 CTR9Q6PD62 1173 aa13.46□□□□□ -0.25
ERCC8-208ENST00000497892 CCDC84Q86UT8 332 aaPredicted RBP13.46□□□□□ -0.25
ERCC8-208ENST00000497892 FAM227BQ96M60 508 aa13.46□□□□□ -0.25
ERCC8-208ENST00000497892 TBC1D2Q9BYX2 928 aa13.46□□□□□ -0.25
ERCC8-208ENST00000497892 ZCCHC17Q9NP64 241 aaKnown RBP13.46□□□□□ -0.25
ERCC8-208ENST00000497892 SWAP70Q9UH65 585 aa13.46□□□□□ -0.25
ERCC8-208ENST00000497892 A0A0G2JLL6 359 aaPredicted RBP13.45□□□□□ -0.26
ERCC8-208ENST00000497892 FOXP2O15409 715 aa13.45□□□□□ -0.26
ERCC8-208ENST00000497892 SDSP20132 328 aa13.45□□□□□ -0.26
ERCC8-208ENST00000497892 TDO2P48775 406 aa13.45□□□□□ -0.26
ERCC8-208ENST00000497892 NMIQ13287 307 aaPredicted RBP13.45□□□□□ -0.26
ERCC8-208ENST00000497892 SBK1Q52WX2 424 aa13.45□□□□□ -0.26
ERCC8-208ENST00000497892 OTUD7BQ6GQQ9 843 aa13.45□□□□□ -0.26
ERCC8-208ENST00000497892 CCDC129Q6ZRS4 1044 aa13.45□□□□□ -0.26
ERCC8-208ENST00000497892 PRRT2Q7Z6L0 340 aaPredicted RBP13.45□□□□□ -0.26
ERCC8-208ENST00000497892 FAM43AQ8N2R8 423 aa13.45□□□□□ -0.26
ERCC8-208ENST00000497892 CCDC136Q96JN2 1154 aa13.45□□□□□ -0.26
ERCC8-208ENST00000497892 CASP8AP2Q9UKL3 1982 aa13.45□□□□□ -0.26
ERCC8-208ENST00000497892 GREB1LQ9C091 1923 aaPredicted RBP13.45□□□□□ -0.26
ERCC8-208ENST00000497892 TRIM75PA6NK02 468 aa13.44□□□□□ -0.26
ERCC8-208ENST00000497892 USP17L5A8MUK1 530 aa13.44□□□□□ -0.26
ERCC8-208ENST00000497892 PATL2C9JE40 543 aaKnown RBP13.44□□□□□ -0.26
ERCC8-208ENST00000497892 BTBD19C9JJ37 291 aa13.44□□□□□ -0.26
ERCC8-208ENST00000497892 SMIM22K7EJ46 135 aa13.44□□□□□ -0.26
ERCC8-208ENST00000497892 TBC1D8O95759 1140 aa13.44□□□□□ -0.26
ERCC8-208ENST00000497892 GH2P01242 217 aa13.44□□□□□ -0.26
ERCC8-208ENST00000497892 APPP05067 770 aa13.44□□□□□ -0.26
ERCC8-208ENST00000497892 FOXK1P85037 733 aa13.44□□□□□ -0.26
ERCC8-208ENST00000497892 CERKLQ49MI3 558 aaPredicted RBP13.44□□□□□ -0.26
ERCC8-208ENST00000497892 MCMDC2Q4G0Z9 681 aa13.44□□□□□ -0.26
ERCC8-208ENST00000497892 NOM1Q5C9Z4 860 aaKnown RBP13.44□□□□□ -0.26
ERCC8-208ENST00000497892 C16orf86Q6ZW13 317 aa13.44□□□□□ -0.26
ERCC8-208ENST00000497892 IFNL3Q8IZI9 196 aa13.44□□□□□ -0.26
ERCC8-208ENST00000497892 SLC44A5Q8NCS7 719 aa13.44□□□□□ -0.26
ERCC8-208ENST00000497892 ZNF280CQ8ND82 737 aa13.44□□□□□ -0.26
ERCC8-208ENST00000497892 DYNLL2Q96FJ2 89 aa13.44□□□□□ -0.26
ERCC8-208ENST00000497892 WDR18Q9BV38 432 aa13.44□□□□□ -0.26
ERCC8-208ENST00000497892 NACAP1Q9BZK3 213 aa13.44□□□□□ -0.26
ERCC8-208ENST00000497892 AS3MTQ9HBK9 375 aa13.44□□□□□ -0.26
ERCC8-208ENST00000497892 GPHNQ9NQX3 736 aaPredicted RBP13.44□□□□□ -0.26
ERCC8-208ENST00000497892 LAMA4Q16363 1823 aa13.43□□□□□ -0.26
ERCC8-208ENST00000497892 CCDC171Q6TFL3 1326 aa13.43□□□□□ -0.26
ERCC8-208ENST00000497892 HIP1O00291 1037 aa13.43□□□□□ -0.26
ERCC8-208ENST00000497892 SPP2Q13103 211 aa13.43□□□□□ -0.26
ERCC8-208ENST00000497892 CRHR2Q13324 411 aa13.43□□□□□ -0.26
ERCC8-208ENST00000497892 ABCB5Q2M3G0 1257 aa13.43□□□□□ -0.26
ERCC8-208ENST00000497892 ANKRD23Q86SG2 305 aa13.43□□□□□ -0.26
ERCC8-208ENST00000497892 ZNF589Q86UQ0 364 aaPredicted RBP13.43□□□□□ -0.26
ERCC8-208ENST00000497892 DIAPH3Q9NSV4 1193 aa13.43□□□□□ -0.26
ERCC8-208ENST00000497892 RYDENQ9NUL5 291 aaKnown RBP13.43□□□□□ -0.26
ERCC8-208ENST00000497892 ZMYM6O95789 1325 aa13.42□□□□□ -0.26
ERCC8-208ENST00000497892 CDK8P49336 464 aa13.42□□□□□ -0.26
ERCC8-208ENST00000497892 VPS53Q5VIR6 699 aa13.42□□□□□ -0.26
ERCC8-208ENST00000497892 ERICH6BQ5W0A0 696 aa13.42□□□□□ -0.26
ERCC8-208ENST00000497892 FASTKD5Q7L8L6 764 aaKnown RBP13.42□□□□□ -0.26
ERCC8-208ENST00000497892 NAPBQ9H115 298 aa13.42□□□□□ -0.26
ERCC8-208ENST00000497892 R3HDMLQ9H3Y0 253 aa13.42□□□□□ -0.26
ERCC8-208ENST00000497892 MINDY4BA8MYZ0 360 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms