RNA–Protein interactions for RNA: ENST00000497327.1

GGPS1-208, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-208ENST00000497327 PLXNC1O60486 1568 aa7.76□□□□□ -1.17
GGPS1-208ENST00000497327 ZFYVE16Q7Z3T8 1539 aa7.75□□□□□ -1.17
GGPS1-208ENST00000497327 FBXO24O75426 580 aa7.75□□□□□ -1.17
GGPS1-208ENST00000497327 PPM1JQ5JR12 505 aa7.75□□□□□ -1.17
GGPS1-208ENST00000497327 SRCIN1Q9C0H9 1055 aa7.75□□□□□ -1.17
GGPS1-208ENST00000497327 TNKS2Q9H2K2 1166 aa7.75□□□□□ -1.17
GGPS1-208ENST00000497327 CBX8Q9HC52 389 aa7.75□□□□□ -1.17
GGPS1-208ENST00000497327 WWC3Q9ULE0 1092 aa7.75□□□□□ -1.17
GGPS1-208ENST00000497327 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.75□□□□□ -1.17
GGPS1-208ENST00000497327 PZPP20742 1482 aa7.75□□□□□ -1.17
GGPS1-208ENST00000497327 ZNF518AQ6AHZ1 1483 aa7.75□□□□□ -1.17
GGPS1-208ENST00000497327 MLH3Q9UHC1 1453 aa7.75□□□□□ -1.17
GGPS1-208ENST00000497327 DUOX2Q9NRD8 1548 aa7.74□□□□□ -1.17
GGPS1-208ENST00000497327 TRIM37O94972 964 aa7.74□□□□□ -1.17
GGPS1-208ENST00000497327 RNASE1P07998 156 aaKnown RBP7.74□□□□□ -1.17
GGPS1-208ENST00000497327 MAPK8P45983 427 aa7.74□□□□□ -1.17
GGPS1-208ENST00000497327 ACSBG1Q96GR2 724 aa7.74□□□□□ -1.17
GGPS1-208ENST00000497327 CSADQ9Y600 493 aa7.74□□□□□ -1.17
GGPS1-208ENST00000497327 ERBINQ96RT1 1412 aa7.74□□□□□ -1.17
GGPS1-208ENST00000497327 KDM5CP41229 1560 aa7.74□□□□□ -1.17
GGPS1-208ENST00000497327 CFAP74Q9C0B2 1584 aa7.74□□□□□ -1.17
GGPS1-208ENST00000497327 INO80Q9ULG1 1556 aaPredicted RBP7.74□□□□□ -1.17
GGPS1-208ENST00000497327 KDM5DQ9BY66 1539 aa7.73□□□□□ -1.17
GGPS1-208ENST00000497327 DHX29Q7Z478 1369 aaKnown RBP7.73□□□□□ -1.17
GGPS1-208ENST00000497327 DCDC2CA8MYV0 355 aa7.73□□□□□ -1.17
GGPS1-208ENST00000497327 RAPGEF3O95398 923 aa7.73□□□□□ -1.17
GGPS1-208ENST00000497327 AOC3Q16853 763 aa7.73□□□□□ -1.17
GGPS1-208ENST00000497327 HRASLS5Q96KN8 279 aa7.73□□□□□ -1.17
GGPS1-208ENST00000497327 ASB16Q96NS5 453 aa7.73□□□□□ -1.17
GGPS1-208ENST00000497327 SIN3AQ96ST3 1273 aa7.73□□□□□ -1.17
GGPS1-208ENST00000497327 CEP44Q9C0F1 390 aa7.73□□□□□ -1.17
GGPS1-208ENST00000497327 SSU72Q9NP77 194 aaKnown RBP7.73□□□□□ -1.17
GGPS1-208ENST00000497327 ATP7AQ04656 1500 aa7.73□□□□□ -1.17
GGPS1-208ENST00000497327 TMEM265A0A087WTH1 108 aa7.72□□□□□ -1.17
GGPS1-208ENST00000497327 C8AP07357 584 aa7.72□□□□□ -1.17
GGPS1-208ENST00000497327 CELA3AP09093 270 aa7.72□□□□□ -1.17
GGPS1-208ENST00000497327 ZBTB37Q5TC79 503 aa7.72□□□□□ -1.17
GGPS1-208ENST00000497327 ALG1LQ6GMV1 187 aa7.72□□□□□ -1.17
GGPS1-208ENST00000497327 LLGL2Q6P1M3 1020 aa7.72□□□□□ -1.17
GGPS1-208ENST00000497327 C12orf40Q86WS4 652 aa7.72□□□□□ -1.17
GGPS1-208ENST00000497327 RC3H2Q9HBD1 1191 aaKnown RBP7.72□□□□□ -1.17
GGPS1-208ENST00000497327 PRDM10Q9NQV6 1147 aa7.72□□□□□ -1.17
GGPS1-208ENST00000497327 IVNS1ABPQ9Y6Y0 642 aa7.72□□□□□ -1.17
GGPS1-208ENST00000497327 TEX14Q8IWB6 1497 aa7.72□□□□□ -1.17
GGPS1-208ENST00000497327 PPRC1Q5VV67 1664 aaKnown RBP7.72□□□□□ -1.17
GGPS1-208ENST00000497327 NUP155O75694 1391 aa7.71□□□□□ -1.17
GGPS1-208ENST00000497327 ANKRD30BQ9BXX2 1392 aa7.71□□□□□ -1.17
GGPS1-208ENST00000497327 MAGI2Q86UL8 1455 aa7.71□□□□□ -1.18
GGPS1-208ENST00000497327 ITIH2P19823 946 aa7.71□□□□□ -1.18
GGPS1-208ENST00000497327 ATG4DQ86TL0 474 aaPredicted RBP7.71□□□□□ -1.18
GGPS1-208ENST00000497327 LRRN4CLQ8ND94 238 aa7.71□□□□□ -1.18
GGPS1-208ENST00000497327 KIDINS220Q9ULH0 1771 aa7.7□□□□□ -1.18
GGPS1-208ENST00000497327 IGF2BP3O00425 579 aaKnown RBP eCLIP7.7□□□□□ -1.18
GGPS1-208ENST00000497327 GIPC1O14908 333 aa7.7□□□□□ -1.18
GGPS1-208ENST00000497327 FANCGO15287 622 aa7.7□□□□□ -1.18
GGPS1-208ENST00000497327 JAG1P78504 1218 aa7.7□□□□□ -1.18
GGPS1-208ENST00000497327 FZD5Q13467 585 aa7.7□□□□□ -1.18
GGPS1-208ENST00000497327 SCARA3Q6AZY7 606 aa7.7□□□□□ -1.18
GGPS1-208ENST00000497327 ARHGAP27Q6ZUM4 889 aa7.7□□□□□ -1.18
GGPS1-208ENST00000497327 ZSCAN29Q8IWY8 852 aaPredicted RBP7.7□□□□□ -1.18
GGPS1-208ENST00000497327 SPACA3Q8IXA5 215 aa7.7□□□□□ -1.18
GGPS1-208ENST00000497327 C12orf49Q9H741 205 aa7.7□□□□□ -1.18
GGPS1-208ENST00000497327 SAMM50Q9Y512 469 aa7.7□□□□□ -1.18
GGPS1-208ENST00000497327 SNX11Q9Y5W9 270 aa7.7□□□□□ -1.18
GGPS1-208ENST00000497327 KIF13AQ9H1H9 1805 aa7.69□□□□□ -1.18
GGPS1-208ENST00000497327 UNC13BO14795 1591 aa7.69□□□□□ -1.18
GGPS1-208ENST00000497327 FRMPD1Q5SYB0 1578 aa7.69□□□□□ -1.18
GGPS1-208ENST00000497327 EOMESO95936 686 aa7.69□□□□□ -1.18
GGPS1-208ENST00000497327 PTPN11Q06124 597 aaPredicted RBP7.69□□□□□ -1.18
GGPS1-208ENST00000497327 PCNX4Q63HM2 1172 aa7.69□□□□□ -1.18
GGPS1-208ENST00000497327 PCDHA4Q9UN74 947 aa7.69□□□□□ -1.18
GGPS1-208ENST00000497327 A2MP01023 1474 aa7.68□□□□□ -1.18
GGPS1-208ENST00000497327 ZMYM4Q5VZL5 1548 aa7.68□□□□□ -1.18
GGPS1-208ENST00000497327 BIN1O00499 593 aa7.68□□□□□ -1.18
GGPS1-208ENST00000497327 P4HBP07237 508 aaKnown RBP7.68□□□□□ -1.18
GGPS1-208ENST00000497327 USP17L7P0C7H9 530 aa7.68□□□□□ -1.18
GGPS1-208ENST00000497327 LRRC14Q15048 493 aa7.68□□□□□ -1.18
GGPS1-208ENST00000497327 NKPD1Q17RQ9 610 aa7.68□□□□□ -1.18
GGPS1-208ENST00000497327 ANGEL2Q5VTE6 544 aaKnown RBP7.68□□□□□ -1.18
GGPS1-208ENST00000497327 LRFN4Q6PJG9 635 aa7.68□□□□□ -1.18
GGPS1-208ENST00000497327 PI4K2BQ8TCG2 481 aa7.68□□□□□ -1.18
GGPS1-208ENST00000497327 GAL3ST3Q96A11 431 aa7.68□□□□□ -1.18
GGPS1-208ENST00000497327 GTF2IRD1Q9UHL9 959 aa7.68□□□□□ -1.18
GGPS1-208ENST00000497327 CYP8B1Q9UNU6 501 aa7.68□□□□□ -1.18
GGPS1-208ENST00000497327 YEATS2Q9ULM3 1422 aa7.68□□□□□ -1.18
GGPS1-208ENST00000497327 FAM135AQ9P2D6 1515 aa7.68□□□□□ -1.18
GGPS1-208ENST00000497327 VWDEQ8N2E2 1590 aa7.67□□□□□ -1.18
GGPS1-208ENST00000497327 HECW2Q9P2P5 1572 aa7.67□□□□□ -1.18
GGPS1-208ENST00000497327 RICTORQ6R327 1708 aa7.67□□□□□ -1.18
GGPS1-208ENST00000497327 INPP5AQ14642 412 aa7.67□□□□□ -1.18
GGPS1-208ENST00000497327 SLC23A3Q6PIS1 610 aa7.67□□□□□ -1.18
GGPS1-208ENST00000497327 ARMCX6Q7L4S7 300 aa7.67□□□□□ -1.18
GGPS1-208ENST00000497327 FAM8A1Q9UBU6 413 aa7.67□□□□□ -1.18
GGPS1-208ENST00000497327 SPG7Q9UQ90 795 aa7.67□□□□□ -1.18
GGPS1-208ENST00000497327 KIF3BO15066 747 aa7.66□□□□□ -1.18
GGPS1-208ENST00000497327 KCNA1Q09470 495 aa7.66□□□□□ -1.18
GGPS1-208ENST00000497327 CYFIP1Q7L576 1253 aa7.66□□□□□ -1.18
GGPS1-208ENST00000497327 FAM168AQ92567 244 aa7.66□□□□□ -1.18
GGPS1-208ENST00000497327 FBRSQ9HAH7 460 aa7.66□□□□□ -1.18
GGPS1-208ENST00000497327 PRDM7Q9NQW5 492 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms