RNA–Protein interactions for RNA: ENST00000497089.1

HOXA9-206, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 1,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-206ENST00000497089 NEURL1BA8MQ27 555 aa8.13□□□□□ -1.11
HOXA9-206ENST00000497089 H7C1W4 665 aa8.13□□□□□ -1.11
HOXA9-206ENST00000497089 PDE8AO60658 829 aa8.13□□□□□ -1.11
HOXA9-206ENST00000497089 PSMA6P60900 246 aaKnown RBP8.13□□□□□ -1.11
HOXA9-206ENST00000497089 EXOSC9Q06265 439 aaKnown RBP8.13□□□□□ -1.11
HOXA9-206ENST00000497089 AOC3Q16853 763 aa8.13□□□□□ -1.11
HOXA9-206ENST00000497089 CCDC152Q4G0S7 254 aa8.13□□□□□ -1.11
HOXA9-206ENST00000497089 ZNF787Q6DD87 383 aa8.13□□□□□ -1.11
HOXA9-206ENST00000497089 PRICKLE2Q7Z3G6 844 aa8.13□□□□□ -1.11
HOXA9-206ENST00000497089 FAM9BQ8IZU0 186 aa8.13□□□□□ -1.11
HOXA9-206ENST00000497089 GTF3C2Q8WUA4 911 aaPredicted RBP8.13□□□□□ -1.11
HOXA9-206ENST00000497089 ZNF428Q96B54 188 aa8.13□□□□□ -1.11
HOXA9-206ENST00000497089 MYH16Q9H6N6 1097 aa8.13□□□□□ -1.11
HOXA9-206ENST00000497089 RRAGDQ9NQL2 400 aaPredicted RBP8.13□□□□□ -1.11
HOXA9-206ENST00000497089 SPATA31C2B4DYI2 1134 aa8.12□□□□□ -1.11
HOXA9-206ENST00000497089 CTSWP56202 376 aa8.12□□□□□ -1.11
HOXA9-206ENST00000497089 HTRA3P83110 453 aa8.12□□□□□ -1.11
HOXA9-206ENST00000497089 CXCL9Q07325 125 aa8.12□□□□□ -1.11
HOXA9-206ENST00000497089 NAA30Q147X3 362 aaPredicted RBP8.12□□□□□ -1.11
HOXA9-206ENST00000497089 TMEM214Q6NUQ4 689 aaKnown RBP8.12□□□□□ -1.11
HOXA9-206ENST00000497089 STAG2Q8N3U4 1231 aa8.12□□□□□ -1.11
HOXA9-206ENST00000497089 LINS1Q8NG48 757 aa8.12□□□□□ -1.11
HOXA9-206ENST00000497089 PLA2G12BQ9BX93 195 aa8.12□□□□□ -1.11
HOXA9-206ENST00000497089 SEPT3Q9UH03 358 aa8.12□□□□□ -1.11
HOXA9-206ENST00000497089 NSFL1CQ9UNZ2 370 aaKnown RBP8.12□□□□□ -1.11
HOXA9-206ENST00000497089 CASP7P55210 303 aa8.11□□□□□ -1.11
HOXA9-206ENST00000497089 GPSM2P81274 684 aa8.11□□□□□ -1.11
HOXA9-206ENST00000497089 GCKRQ14397 625 aa8.11□□□□□ -1.11
HOXA9-206ENST00000497089 CWF19L2Q2TBE0 894 aaKnown RBP8.11□□□□□ -1.11
HOXA9-206ENST00000497089 CIAPIN1Q6FI81 312 aa8.11□□□□□ -1.11
HOXA9-206ENST00000497089 USP50Q70EL3 339 aaPredicted RBP8.11□□□□□ -1.11
HOXA9-206ENST00000497089 GLYCTKQ8IVS8 523 aa8.11□□□□□ -1.11
HOXA9-206ENST00000497089 TTLL11Q8NHH1 800 aa8.11□□□□□ -1.11
HOXA9-206ENST00000497089 DNAAF4Q8WXU2 420 aa8.11□□□□□ -1.11
HOXA9-206ENST00000497089 SEC31BQ9NQW1 1179 aa8.11□□□□□ -1.11
HOXA9-206ENST00000497089 GPRC5DQ9NZD1 345 aa8.11□□□□□ -1.11
HOXA9-206ENST00000497089 POLLQ9UGP5 575 aa8.11□□□□□ -1.11
HOXA9-206ENST00000497089 ZNF232Q9UNY5 417 aa8.11□□□□□ -1.11
HOXA9-206ENST00000497089 IQSEC3Q9UPP2 1182 aaPredicted RBP8.11□□□□□ -1.11
HOXA9-206ENST00000497089 GJA3Q9Y6H8 435 aa8.11□□□□□ -1.11
HOXA9-206ENST00000497089 ZNF609O15014 1411 aa8.11□□□□□ -1.11
HOXA9-206ENST00000497089 SERTM1A2A2V5 107 aa8.1□□□□□ -1.11
HOXA9-206ENST00000497089 YDJCA8MPS7 323 aa8.1□□□□□ -1.11
HOXA9-206ENST00000497089 H3BRB1 525 aa8.1□□□□□ -1.11
HOXA9-206ENST00000497089 ICMTO60725 284 aa8.1□□□□□ -1.11
HOXA9-206ENST00000497089 EPS15P42566 896 aa8.1□□□□□ -1.11
HOXA9-206ENST00000497089 POU4F2Q12837 409 aa8.1□□□□□ -1.11
HOXA9-206ENST00000497089 ZNF211Q13398 564 aaPredicted RBP8.1□□□□□ -1.11
HOXA9-206ENST00000497089 TNIP1Q15025 636 aa8.1□□□□□ -1.11
HOXA9-206ENST00000497089 EAPPQ56P03 285 aaPredicted RBP8.1□□□□□ -1.11
HOXA9-206ENST00000497089 WDR44Q5JSH3 913 aa8.1□□□□□ -1.11
HOXA9-206ENST00000497089 GNASQ5JWF2 1037 aa8.1□□□□□ -1.11
HOXA9-206ENST00000497089 UBE3BQ7Z3V4 1068 aa8.1□□□□□ -1.11
HOXA9-206ENST00000497089 MTERF4Q7Z6M4 381 aaKnown RBP8.1□□□□□ -1.11
HOXA9-206ENST00000497089 CNTROBQ8N137 903 aa8.1□□□□□ -1.11
HOXA9-206ENST00000497089 TBC1D16Q8TBP0 767 aa8.1□□□□□ -1.11
HOXA9-206ENST00000497089 RHBDD1Q8TEB9 315 aa8.1□□□□□ -1.11
HOXA9-206ENST00000497089 DPF2Q92785 391 aa8.1□□□□□ -1.11
HOXA9-206ENST00000497089 JARID2Q92833 1246 aaPredicted RBP8.1□□□□□ -1.11
HOXA9-206ENST00000497089 EYA3Q99504 573 aa8.1□□□□□ -1.11
HOXA9-206ENST00000497089 C2orf49Q9BVC5 232 aaPredicted RBP8.1□□□□□ -1.11
HOXA9-206ENST00000497089 TUT1Q9H6E5 874 aaKnown RBP8.1□□□□□ -1.11
HOXA9-206ENST00000497089 ANO2Q9NQ90 1003 aa8.1□□□□□ -1.11
HOXA9-206ENST00000497089 PGAP2Q9UHJ9 254 aa8.1□□□□□ -1.11
HOXA9-206ENST00000497089 ISY1Q9ULR0 285 aaKnown RBP8.1□□□□□ -1.11
HOXA9-206ENST00000497089 USP3Q9Y6I4 520 aa8.1□□□□□ -1.11
HOXA9-206ENST00000497089 PSME4Q14997 1843 aa8.1□□□□□ -1.11
HOXA9-206ENST00000497089 CSF1RP07333 972 aa8.1□□□□□ -1.11
HOXA9-206ENST00000497089 GMPSP49915 693 aaPredicted RBP8.1□□□□□ -1.11
HOXA9-206ENST00000497089 BEND3Q5T5X7 828 aa8.1□□□□□ -1.11
HOXA9-206ENST00000497089 CAPN12Q6ZSI9 719 aa8.1□□□□□ -1.11
HOXA9-206ENST00000497089 ANKRD18AQ8IVF6 992 aa8.1□□□□□ -1.11
HOXA9-206ENST00000497089 ZNF295-AS1Q8N0V1 137 aa8.1□□□□□ -1.11
HOXA9-206ENST00000497089 CDC5LQ99459 802 aaKnown RBP8.1□□□□□ -1.11
HOXA9-206ENST00000497089 NIFKQ9BYG3 293 aaKnown RBP8.1□□□□□ -1.11
HOXA9-206ENST00000497089 GREM2Q9H772 168 aa8.1□□□□□ -1.11
HOXA9-206ENST00000497089 ADARB2Q9NS39 739 aaKnown RBP8.1□□□□□ -1.11
HOXA9-206ENST00000497089 BSDC1Q9NW68 430 aaPredicted RBP8.1□□□□□ -1.11
HOXA9-206ENST00000497089 PRDM4Q9UKN5 801 aa8.1□□□□□ -1.11
HOXA9-206ENST00000497089 DNMT3AQ9Y6K1 912 aaPredicted RBP8.1□□□□□ -1.11
HOXA9-206ENST00000497089 SCN9AQ15858 1988 aa8.09□□□□□ -1.11
HOXA9-206ENST00000497089 XDHP47989 1333 aa8.09□□□□□ -1.11
HOXA9-206ENST00000497089 E9PSI1 815 aa8.09□□□□□ -1.12
HOXA9-206ENST00000497089 RAD17O75943 681 aa8.09□□□□□ -1.12
HOXA9-206ENST00000497089 RHOQP17081 205 aa8.09□□□□□ -1.12
HOXA9-206ENST00000497089 RPS12P25398 132 aaKnown RBP8.09□□□□□ -1.12
HOXA9-206ENST00000497089 NOS2P35228 1153 aa8.09□□□□□ -1.12
HOXA9-206ENST00000497089 TERF1P54274 439 aa8.09□□□□□ -1.12
HOXA9-206ENST00000497089 PTSQ03393 145 aa8.09□□□□□ -1.12
HOXA9-206ENST00000497089 TEAD4Q15561 434 aa8.09□□□□□ -1.12
HOXA9-206ENST00000497089 C4orf17Q53FE4 359 aa8.09□□□□□ -1.12
HOXA9-206ENST00000497089 MAP1SQ66K74 1059 aaPredicted RBP8.09□□□□□ -1.12
HOXA9-206ENST00000497089 C16orf46Q6P387 395 aa8.09□□□□□ -1.12
HOXA9-206ENST00000497089 SMAP1Q8IYB5 467 aaPredicted RBP8.09□□□□□ -1.12
HOXA9-206ENST00000497089 RGS22Q8NE09 1264 aa8.09□□□□□ -1.12
HOXA9-206ENST00000497089 HELQQ8TDG4 1101 aa8.09□□□□□ -1.12
HOXA9-206ENST00000497089 ZC3H12CQ9C0D7 883 aaKnown RBP8.09□□□□□ -1.12
HOXA9-206ENST00000497089 GGA1Q9UJY5 639 aa8.09□□□□□ -1.12
HOXA9-206ENST00000497089 TRPM7Q96QT4 1865 aa8.08□□□□□ -1.12
HOXA9-206ENST00000497089 RASSF10A6NK89 507 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms