RNA–Protein interactions for RNA: ENST00000496907.1

HMGCL-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 858 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-206ENST00000496907 ARAP2Q8WZ64 1704 aa7.26□□□□□ -1.25
HMGCL-206ENST00000496907 MANSC4A6NHS7 340 aaPredicted RBP7.25□□□□□ -1.25
HMGCL-206ENST00000496907 GPAA1O43292 621 aa7.25□□□□□ -1.25
HMGCL-206ENST00000496907 MBD4O95243 580 aa7.25□□□□□ -1.25
HMGCL-206ENST00000496907 SLC9C1Q4G0N8 1177 aa7.25□□□□□ -1.25
HMGCL-206ENST00000496907 SBK1Q52WX2 424 aa7.25□□□□□ -1.25
HMGCL-206ENST00000496907 TSHZ3Q63HK5 1081 aa7.25□□□□□ -1.25
HMGCL-206ENST00000496907 ANKRD13AQ8IZ07 590 aa7.25□□□□□ -1.25
HMGCL-206ENST00000496907 CRACR2BQ8N4Y2 399 aaPredicted RBP7.25□□□□□ -1.25
HMGCL-206ENST00000496907 MIGA1Q8NAN2 632 aa7.25□□□□□ -1.25
HMGCL-206ENST00000496907 SH3RF3Q8TEJ3 882 aaPredicted RBP7.25□□□□□ -1.25
HMGCL-206ENST00000496907 ZNF384Q8TF68 577 aa7.25□□□□□ -1.25
HMGCL-206ENST00000496907 EDC3Q96F86 508 aaKnown RBP7.25□□□□□ -1.25
HMGCL-206ENST00000496907 CCDC17Q96LX7 622 aa7.25□□□□□ -1.25
HMGCL-206ENST00000496907 PUS7LQ9H0K6 701 aaKnown RBP7.25□□□□□ -1.25
HMGCL-206ENST00000496907 OSBPL5Q9H0X9 879 aaPredicted RBP7.25□□□□□ -1.25
HMGCL-206ENST00000496907 EHD4Q9H223 541 aa7.25□□□□□ -1.25
HMGCL-206ENST00000496907 ARPP21Q9UBL0 812 aaPredicted RBP7.25□□□□□ -1.25
HMGCL-206ENST00000496907 FAM198AQ9UFP1 575 aa7.25□□□□□ -1.25
HMGCL-206ENST00000496907 FZD1Q9UP38 647 aa7.25□□□□□ -1.25
HMGCL-206ENST00000496907 NDUFB9Q9Y6M9 179 aa7.25□□□□□ -1.25
HMGCL-206ENST00000496907 SLC4A4Q9Y6R1 1079 aa7.25□□□□□ -1.25
HMGCL-206ENST00000496907 COL2A1P02458 1487 aaPredicted RBP7.24□□□□□ -1.25
HMGCL-206ENST00000496907 ATRNL1Q5VV63 1379 aa7.24□□□□□ -1.25
HMGCL-206ENST00000496907 A0A1B0GUL6 1792 aa7.24□□□□□ -1.25
HMGCL-206ENST00000496907 IGF2BP3O00425 579 aaKnown RBP eCLIP7.24□□□□□ -1.25
HMGCL-206ENST00000496907 CDC45O75419 566 aa7.24□□□□□ -1.25
HMGCL-206ENST00000496907 CHMLP26374 656 aa7.24□□□□□ -1.25
HMGCL-206ENST00000496907 INHBEP58166 350 aa7.24□□□□□ -1.25
HMGCL-206ENST00000496907 DYNLL1P63167 89 aaKnown RBP7.24□□□□□ -1.25
HMGCL-206ENST00000496907 MAP3K9P80192 1104 aa7.24□□□□□ -1.25
HMGCL-206ENST00000496907 PDE4BQ07343 736 aa7.24□□□□□ -1.25
HMGCL-206ENST00000496907 TCP10Q12799 353 aa7.24□□□□□ -1.25
HMGCL-206ENST00000496907 CRHR2Q13324 411 aa7.24□□□□□ -1.25
HMGCL-206ENST00000496907 PICALMQ13492 652 aa7.24□□□□□ -1.25
HMGCL-206ENST00000496907 CWC27Q6UX04 472 aaKnown RBP7.24□□□□□ -1.25
HMGCL-206ENST00000496907 NBPF11Q86T75 865 aa7.24□□□□□ -1.25
HMGCL-206ENST00000496907 ALYREFQ86V81 257 aaKnown RBP7.24□□□□□ -1.25
HMGCL-206ENST00000496907 METTL16Q86W50 562 aaKnown RBP7.24□□□□□ -1.25
HMGCL-206ENST00000496907 IFNL3Q8IZI9 196 aa7.24□□□□□ -1.25
HMGCL-206ENST00000496907 OSBP2Q969R2 916 aa7.24□□□□□ -1.25
HMGCL-206ENST00000496907 SLC10A4Q96EP9 437 aa7.24□□□□□ -1.25
HMGCL-206ENST00000496907 ZNF333Q96JL9 665 aa7.24□□□□□ -1.25
HMGCL-206ENST00000496907 DSCC1Q9BVC3 393 aa7.24□□□□□ -1.25
HMGCL-206ENST00000496907 NAPBQ9H115 298 aa7.24□□□□□ -1.25
HMGCL-206ENST00000496907 ARMT1Q9H993 441 aa7.24□□□□□ -1.25
HMGCL-206ENST00000496907 DCP1AQ9NPI6 582 aaPredicted RBP7.24□□□□□ -1.25
HMGCL-206ENST00000496907 MCM9Q9NXL9 1143 aa7.24□□□□□ -1.25
HMGCL-206ENST00000496907 SERPINB13Q9UIV8 391 aa7.24□□□□□ -1.25
HMGCL-206ENST00000496907 CSADQ9Y600 493 aa7.24□□□□□ -1.25
HMGCL-206ENST00000496907 ZMYM6O95789 1325 aa7.24□□□□□ -1.25
HMGCL-206ENST00000496907 FLT1P17948 1338 aa7.24□□□□□ -1.25
HMGCL-206ENST00000496907 CCDC171Q6TFL3 1326 aa7.24□□□□□ -1.25
HMGCL-206ENST00000496907 RPTORQ8N122 1335 aa7.24□□□□□ -1.25
HMGCL-206ENST00000496907 GSG1L2A8MUP6 293 aa7.23□□□□□ -1.25
HMGCL-206ENST00000496907 TNFRSF10AO00220 468 aa7.23□□□□□ -1.25
HMGCL-206ENST00000496907 CTNND1O60716 968 aaKnown RBP7.23□□□□□ -1.25
HMGCL-206ENST00000496907 USP2O75604 605 aaPredicted RBP7.23□□□□□ -1.25
HMGCL-206ENST00000496907 PPP1R37O75864 691 aa7.23□□□□□ -1.25
HMGCL-206ENST00000496907 REC8O95072 547 aa7.23□□□□□ -1.25
HMGCL-206ENST00000496907 GSPT1P15170 499 aaKnown RBP7.23□□□□□ -1.25
HMGCL-206ENST00000496907 TDO2P48775 406 aa7.23□□□□□ -1.25
HMGCL-206ENST00000496907 SP3Q02447 781 aa7.23□□□□□ -1.25
HMGCL-206ENST00000496907 NFIAQ12857 509 aa7.23□□□□□ -1.25
HMGCL-206ENST00000496907 NMIQ13287 307 aaPredicted RBP7.23□□□□□ -1.25
HMGCL-206ENST00000496907 CCDC178Q5BJE1 867 aa7.23□□□□□ -1.25
HMGCL-206ENST00000496907 LDLRAD1Q5T700 205 aa7.23□□□□□ -1.25
HMGCL-206ENST00000496907 NBPF12Q5TAG4 269 aaPredicted RBP7.23□□□□□ -1.25
HMGCL-206ENST00000496907 C12orf60Q5U649 245 aa7.23□□□□□ -1.25
HMGCL-206ENST00000496907 RNF20Q5VTR2 975 aa7.23□□□□□ -1.25
HMGCL-206ENST00000496907 OTUD7BQ6GQQ9 843 aa7.23□□□□□ -1.25
HMGCL-206ENST00000496907 ADGRA1Q86SQ6 560 aa7.23□□□□□ -1.25
HMGCL-206ENST00000496907 MAPKAPK5Q8IW41 473 aa7.23□□□□□ -1.25
HMGCL-206ENST00000496907 LCORLQ8N3X6 602 aa7.23□□□□□ -1.25
HMGCL-206ENST00000496907 IL27Q8NEV9 243 aa7.23□□□□□ -1.25
HMGCL-206ENST00000496907 CLMNQ96JQ2 1002 aa7.23□□□□□ -1.25
HMGCL-206ENST00000496907 FAM161BQ96MY7 647 aa7.23□□□□□ -1.25
HMGCL-206ENST00000496907 TEPSINQ96N21 525 aa7.23□□□□□ -1.25
HMGCL-206ENST00000496907 TMEM39BQ9GZU3 492 aa7.23□□□□□ -1.25
HMGCL-206ENST00000496907 RNF41Q9H4P4 317 aaPredicted RBP7.23□□□□□ -1.25
HMGCL-206ENST00000496907 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.23□□□□□ -1.25
HMGCL-206ENST00000496907 ZSWIM6Q9HCJ5 1215 aa7.23□□□□□ -1.25
HMGCL-206ENST00000496907 CABP5Q9NP86 173 aa7.23□□□□□ -1.25
HMGCL-206ENST00000496907 ZNF112Q9UJU3 913 aa7.23□□□□□ -1.25
HMGCL-206ENST00000496907 PCDHAC2Q9Y5I4 1007 aa7.23□□□□□ -1.25
HMGCL-206ENST00000496907 GTF3C3Q9Y5Q9 886 aa7.23□□□□□ -1.25
HMGCL-206ENST00000496907 BDP1A6H8Y1 2624 aa7.23□□□□□ -1.25
HMGCL-206ENST00000496907 LAMB1P07942 1786 aa7.23□□□□□ -1.25
HMGCL-206ENST00000496907 USP17L12C9JPN9 530 aa7.22□□□□□ -1.25
HMGCL-206ENST00000496907 USP17L21D6R901 530 aa7.22□□□□□ -1.25
HMGCL-206ENST00000496907 ZNF213O14771 459 aa7.22□□□□□ -1.25
HMGCL-206ENST00000496907 SGSM2O43147 1006 aa7.22□□□□□ -1.25
HMGCL-206ENST00000496907 ASNSP08243 561 aa7.22□□□□□ -1.25
HMGCL-206ENST00000496907 ZBTB48P10074 688 aaPredicted RBP7.22□□□□□ -1.25
HMGCL-206ENST00000496907 HSPD1P10809 573 aaKnown RBP7.22□□□□□ -1.25
HMGCL-206ENST00000496907 CACNB3P54284 484 aa7.22□□□□□ -1.25
HMGCL-206ENST00000496907 ARHGEF6Q15052 776 aa7.22□□□□□ -1.25
HMGCL-206ENST00000496907 IMMTQ16891 758 aaKnown RBP7.22□□□□□ -1.25
HMGCL-206ENST00000496907 ZNF444Q8N0Y2 327 aaPredicted RBP7.22□□□□□ -1.25
HMGCL-206ENST00000496907 WNK4Q96J92 1243 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms