RNA–Protein interactions for RNA: ENST00000496530.1

SMARCD3-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-215ENST00000496530 SMCR8Q8TEV9 937 aaPredicted RBP9.69□□□□□ -0.86
SMARCD3-215ENST00000496530 ZNF296Q8WUU4 475 aaPredicted RBP9.69□□□□□ -0.86
SMARCD3-215ENST00000496530 PTPN18Q99952 460 aa9.69□□□□□ -0.86
SMARCD3-215ENST00000496530 WDR18Q9BV38 432 aa9.69□□□□□ -0.86
SMARCD3-215ENST00000496530 USP26Q9BXU7 913 aa9.69□□□□□ -0.86
SMARCD3-215ENST00000496530 SH2D4AQ9H788 454 aa9.69□□□□□ -0.86
SMARCD3-215ENST00000496530 DNAJC18Q9H819 358 aa9.69□□□□□ -0.86
SMARCD3-215ENST00000496530 MKNK2Q9HBH9 465 aa9.69□□□□□ -0.86
SMARCD3-215ENST00000496530 AGTPBP1Q9UPW5 1226 aa9.69□□□□□ -0.86
SMARCD3-215ENST00000496530 BAZ2AQ9UIF9 1905 aaKnown RBP9.68□□□□□ -0.86
SMARCD3-215ENST00000496530 GSG1L2A8MUP6 293 aa9.68□□□□□ -0.86
SMARCD3-215ENST00000496530 TLR2O60603 784 aa9.68□□□□□ -0.86
SMARCD3-215ENST00000496530 GH2P01242 217 aa9.68□□□□□ -0.86
SMARCD3-215ENST00000496530 FGAP02671 866 aa9.68□□□□□ -0.86
SMARCD3-215ENST00000496530 SLURP2P0DP57 97 aa9.68□□□□□ -0.86
SMARCD3-215ENST00000496530 KCNA4P22459 653 aa9.68□□□□□ -0.86
SMARCD3-215ENST00000496530 HMGCS2P54868 508 aa9.68□□□□□ -0.86
SMARCD3-215ENST00000496530 BACE1P56817 501 aa9.68□□□□□ -0.86
SMARCD3-215ENST00000496530 HAND2P61296 217 aa9.68□□□□□ -0.86
SMARCD3-215ENST00000496530 GABPAQ06546 454 aa9.68□□□□□ -0.86
SMARCD3-215ENST00000496530 SBK1Q52WX2 424 aa9.68□□□□□ -0.86
SMARCD3-215ENST00000496530 CTR9Q6PD62 1173 aa9.68□□□□□ -0.86
SMARCD3-215ENST00000496530 USP17L2Q6R6M4 530 aa9.68□□□□□ -0.86
SMARCD3-215ENST00000496530 TMEM179Q6ZVK1 233 aa9.68□□□□□ -0.86
SMARCD3-215ENST00000496530 CTU1Q7Z7A3 348 aaKnown RBP9.68□□□□□ -0.86
SMARCD3-215ENST00000496530 ZNF444Q8N0Y2 327 aaPredicted RBP9.68□□□□□ -0.86
SMARCD3-215ENST00000496530 C22orf23Q9BZE7 217 aa9.68□□□□□ -0.86
SMARCD3-215ENST00000496530 IL25Q9H293 177 aa9.68□□□□□ -0.86
SMARCD3-215ENST00000496530 ARHGEF10LQ9HCE6 1279 aa9.68□□□□□ -0.86
SMARCD3-215ENST00000496530 TOMM22Q9NS69 142 aa9.68□□□□□ -0.86
SMARCD3-215ENST00000496530 RBM8AQ9Y5S9 174 aaKnown RBP9.68□□□□□ -0.86
SMARCD3-215ENST00000496530 U3KPZ7 1027 aaPredicted RBP9.68□□□□□ -0.86
SMARCD3-215ENST00000496530 PHIPQ8WWQ0 1821 aa9.68□□□□□ -0.86
SMARCD3-215ENST00000496530 HOXD10P28358 340 aa9.67□□□□□ -0.86
SMARCD3-215ENST00000496530 SHMT1P34896 483 aa9.67□□□□□ -0.86
SMARCD3-215ENST00000496530 CDK8P49336 464 aa9.67□□□□□ -0.86
SMARCD3-215ENST00000496530 IRX3P78415 501 aaPredicted RBP9.67□□□□□ -0.86
SMARCD3-215ENST00000496530 CTDSPL2Q05D32 466 aa9.67□□□□□ -0.86
SMARCD3-215ENST00000496530 MTMR2Q13614 643 aa9.67□□□□□ -0.86
SMARCD3-215ENST00000496530 IMMTQ16891 758 aaKnown RBP9.67□□□□□ -0.86
SMARCD3-215ENST00000496530 SH3D19Q5HYK7 790 aa9.67□□□□□ -0.86
SMARCD3-215ENST00000496530 PPP4R3BQ5MIZ7 849 aa9.67□□□□□ -0.86
SMARCD3-215ENST00000496530 RNF20Q5VTR2 975 aa9.67□□□□□ -0.86
SMARCD3-215ENST00000496530 C16orf86Q6ZW13 317 aa9.67□□□□□ -0.86
SMARCD3-215ENST00000496530 GTF3C2Q8WUA4 911 aaPredicted RBP9.67□□□□□ -0.86
SMARCD3-215ENST00000496530 MAP4K1Q92918 833 aa9.67□□□□□ -0.86
SMARCD3-215ENST00000496530 LSG1Q9H089 658 aaKnown RBP9.67□□□□□ -0.86
SMARCD3-215ENST00000496530 CASP8AP2Q9UKL3 1982 aa9.66□□□□□ -0.86
SMARCD3-215ENST00000496530 LOC285556D6RIA3 1793 aa9.66□□□□□ -0.86
SMARCD3-215ENST00000496530 RAD50Q92878 1312 aa9.66□□□□□ -0.86
SMARCD3-215ENST00000496530 CYP2D7A0A087X1C5 515 aa9.66□□□□□ -0.86
SMARCD3-215ENST00000496530 GNRH1P01148 92 aa9.66□□□□□ -0.86
SMARCD3-215ENST00000496530 CYP2D6P10635 497 aa9.66□□□□□ -0.86
SMARCD3-215ENST00000496530 ZKSCAN1P17029 563 aaPredicted RBP9.66□□□□□ -0.86
SMARCD3-215ENST00000496530 RRP12Q5JTH9 1297 aaKnown RBP9.66□□□□□ -0.86
SMARCD3-215ENST00000496530 CCDC84Q86UT8 332 aaPredicted RBP9.66□□□□□ -0.86
SMARCD3-215ENST00000496530 DYNLL2Q96FJ2 89 aa9.66□□□□□ -0.86
SMARCD3-215ENST00000496530 DSCC1Q9BVC3 393 aa9.66□□□□□ -0.86
SMARCD3-215ENST00000496530 INCENPQ9NQS7 918 aa9.66□□□□□ -0.86
SMARCD3-215ENST00000496530 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.66□□□□□ -0.86
SMARCD3-215ENST00000496530 TRIM17Q9Y577 477 aa9.66□□□□□ -0.86
SMARCD3-215ENST00000496530 PTPRFP10586 1907 aa9.66□□□□□ -0.86
SMARCD3-215ENST00000496530 ROBO3Q96MS0 1386 aa9.65□□□□□ -0.86
SMARCD3-215ENST00000496530 GCLCP48506 637 aaPredicted RBP9.65□□□□□ -0.86
SMARCD3-215ENST00000496530 ICA1Q05084 483 aa9.65□□□□□ -0.86
SMARCD3-215ENST00000496530 PPARAQ07869 468 aa9.65□□□□□ -0.86
SMARCD3-215ENST00000496530 RRP1BQ14684 758 aaKnown RBP9.65□□□□□ -0.86
SMARCD3-215ENST00000496530 ALX1Q15699 326 aa9.65□□□□□ -0.86
SMARCD3-215ENST00000496530 ZYXQ15942 572 aaKnown RBP9.65□□□□□ -0.86
SMARCD3-215ENST00000496530 CREB3L3Q68CJ9 461 aa9.65□□□□□ -0.86
SMARCD3-215ENST00000496530 MCOLN1Q9GZU1 580 aa9.65□□□□□ -0.86
SMARCD3-215ENST00000496530 KANSL2Q9H9L4 492 aa9.65□□□□□ -0.86
SMARCD3-215ENST00000496530 EFCC1Q9HA90 598 aa9.65□□□□□ -0.86
SMARCD3-215ENST00000496530 SLC27A2O14975 620 aa9.64□□□□□ -0.87
SMARCD3-215ENST00000496530 RAD21O60216 631 aa9.64□□□□□ -0.87
SMARCD3-215ENST00000496530 TSPY3P0CV98 308 aa9.64□□□□□ -0.87
SMARCD3-215ENST00000496530 TSPY8P0CW00 308 aa9.64□□□□□ -0.87
SMARCD3-215ENST00000496530 CYP2C8P10632 490 aa9.64□□□□□ -0.87
SMARCD3-215ENST00000496530 HOXA7P31268 230 aaPredicted RBP9.64□□□□□ -0.87
SMARCD3-215ENST00000496530 PRMT2P55345 433 aa9.64□□□□□ -0.87
SMARCD3-215ENST00000496530 FCGRTP55899 365 aa9.64□□□□□ -0.87
SMARCD3-215ENST00000496530 ATP2B2Q01814 1243 aa9.64□□□□□ -0.87
SMARCD3-215ENST00000496530 TRDNQ13061 729 aa9.64□□□□□ -0.87
SMARCD3-215ENST00000496530 SEPT2Q15019 361 aa9.64□□□□□ -0.87
SMARCD3-215ENST00000496530 GPAT2Q6NUI2 795 aa9.64□□□□□ -0.87
SMARCD3-215ENST00000496530 FBXO46Q6PJ61 603 aaPredicted RBP9.64□□□□□ -0.87
SMARCD3-215ENST00000496530 MFSD6Q6ZSS7 791 aa9.64□□□□□ -0.87
SMARCD3-215ENST00000496530 CCAR1Q8IX12 1150 aaKnown RBP9.64□□□□□ -0.87
SMARCD3-215ENST00000496530 SLC44A5Q8NCS7 719 aa9.64□□□□□ -0.87
SMARCD3-215ENST00000496530 CD99L2Q8TCZ2 262 aa9.64□□□□□ -0.87
SMARCD3-215ENST00000496530 KIAA1683Q9H0B3 1180 aa9.64□□□□□ -0.87
SMARCD3-215ENST00000496530 CWC22Q9HCG8 908 aaKnown RBP9.64□□□□□ -0.87
SMARCD3-215ENST00000496530 EPB41L4AQ9HCS5 686 aaPredicted RBP9.64□□□□□ -0.87
SMARCD3-215ENST00000496530 GOPCQ9HD26 462 aa9.64□□□□□ -0.87
SMARCD3-215ENST00000496530 DAXXQ9UER7 740 aaPredicted RBP9.64□□□□□ -0.87
SMARCD3-215ENST00000496530 CPA4Q9UI42 421 aa9.64□□□□□ -0.87
SMARCD3-215ENST00000496530 ZMYM6O95789 1325 aa9.63□□□□□ -0.87
SMARCD3-215ENST00000496530 TSPY2A6NKD2 308 aa9.63□□□□□ -0.87
SMARCD3-215ENST00000496530 USP17L15C9J2P7 530 aa9.63□□□□□ -0.87
SMARCD3-215ENST00000496530 USP17L13C9JLJ4 530 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms