RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 C16orf86Q6ZW13 317 aa10.05□□□□□ -0.8
U2AF1-212ENST00000496462 PARK7Q99497 189 aaKnown RBP10.05□□□□□ -0.8
U2AF1-212ENST00000496462 SH2B1Q9NRF2 756 aaPredicted RBP10.05□□□□□ -0.8
U2AF1-212ENST00000496462 CAP2P40123 477 aa10.05□□□□□ -0.8
U2AF1-212ENST00000496462 RHBDL3P58872 404 aa10.05□□□□□ -0.8
U2AF1-212ENST00000496462 SLFN13Q68D06 897 aa10.05□□□□□ -0.8
U2AF1-212ENST00000496462 DGKHQ86XP1 1220 aa10.05□□□□□ -0.8
U2AF1-212ENST00000496462 GLT8D2Q9H1C3 349 aa10.05□□□□□ -0.8
U2AF1-212ENST00000496462 HOXC10Q9NYD6 342 aa10.05□□□□□ -0.8
U2AF1-212ENST00000496462 TRIM75PA6NK02 468 aa10.04□□□□□ -0.8
U2AF1-212ENST00000496462 NOL8Q76FK4 1167 aaKnown RBP10.04□□□□□ -0.8
U2AF1-212ENST00000496462 NEDD1Q8NHV4 660 aa10.04□□□□□ -0.8
U2AF1-212ENST00000496462 ZSCAN10Q96SZ4 725 aaPredicted RBP10.04□□□□□ -0.8
U2AF1-212ENST00000496462 ZBTB21Q9ULJ3 1066 aa10.04□□□□□ -0.8
U2AF1-212ENST00000496462 PCNTO95613 3336 aa10.04□□□□□ -0.8
U2AF1-212ENST00000496462 TCRBV5S4A2TA0A5A2 114 aa10.04□□□□□ -0.8
U2AF1-212ENST00000496462 H3BQV1 296 aa10.04□□□□□ -0.8
U2AF1-212ENST00000496462 ZYXQ15942 572 aaKnown RBP10.04□□□□□ -0.8
U2AF1-212ENST00000496462 IFFO2Q5TF58 517 aa10.04□□□□□ -0.8
U2AF1-212ENST00000496462 VPS53Q5VIR6 699 aa10.04□□□□□ -0.8
U2AF1-212ENST00000496462 CYP4F22Q6NT55 531 aa10.04□□□□□ -0.8
U2AF1-212ENST00000496462 TM6SF1Q9BZW5 370 aa10.04□□□□□ -0.8
U2AF1-212ENST00000496462 COL4A1P02462 1669 aa10.04□□□□□ -0.8
U2AF1-212ENST00000496462 SPP2Q13103 211 aa10.04□□□□□ -0.8
U2AF1-212ENST00000496462 NYAP2Q9P242 653 aa10.04□□□□□ -0.8
U2AF1-212ENST00000496462 CCL15-CCL14A0A0B4J2E2 113 aa10.03□□□□□ -0.8
U2AF1-212ENST00000496462 USP17L15C9J2P7 530 aa10.03□□□□□ -0.8
U2AF1-212ENST00000496462 USP17L13C9JLJ4 530 aa10.03□□□□□ -0.8
U2AF1-212ENST00000496462 USP17L11C9JVI0 530 aa10.03□□□□□ -0.8
U2AF1-212ENST00000496462 USP17L18D6R9N7 530 aa10.03□□□□□ -0.8
U2AF1-212ENST00000496462 USP17L22D6RA61 530 aa10.03□□□□□ -0.8
U2AF1-212ENST00000496462 USP17L17D6RBQ6 530 aa10.03□□□□□ -0.8
U2AF1-212ENST00000496462 USP17L19D6RCP7 530 aa10.03□□□□□ -0.8
U2AF1-212ENST00000496462 USP17L20D6RJB6 530 aa10.03□□□□□ -0.8
U2AF1-212ENST00000496462 E7EWF7 191 aa10.03□□□□□ -0.8
U2AF1-212ENST00000496462 CA12O43570 354 aa10.03□□□□□ -0.8
U2AF1-212ENST00000496462 PDCP20941 246 aa10.03□□□□□ -0.8
U2AF1-212ENST00000496462 METAP2P50579 478 aaKnown RBP eCLIP10.03□□□□□ -0.8
U2AF1-212ENST00000496462 MAP2K1Q02750 393 aaPredicted RBP10.03□□□□□ -0.8
U2AF1-212ENST00000496462 USP17L24Q0WX57 530 aa10.03□□□□□ -0.8
U2AF1-212ENST00000496462 PPIL2Q13356 520 aa10.03□□□□□ -0.8
U2AF1-212ENST00000496462 PLS1Q14651 629 aa10.03□□□□□ -0.8
U2AF1-212ENST00000496462 CCL15Q16663 113 aa10.03□□□□□ -0.8
U2AF1-212ENST00000496462 RTN1Q16799 776 aa10.03□□□□□ -0.8
U2AF1-212ENST00000496462 FAM198AQ9UFP1 575 aa10.03□□□□□ -0.8
U2AF1-212ENST00000496462 ANAPC4Q9UJX5 808 aa10.03□□□□□ -0.8
U2AF1-212ENST00000496462 ZBTB48P10074 688 aaPredicted RBP10.03□□□□□ -0.8
U2AF1-212ENST00000496462 VEGFBP49765 207 aa10.03□□□□□ -0.8
U2AF1-212ENST00000496462 ASPRV1Q53RT3 343 aa10.03□□□□□ -0.8
U2AF1-212ENST00000496462 DNAJC5GQ8N7S2 189 aa10.03□□□□□ -0.8
U2AF1-212ENST00000496462 RRP36Q96EU6 259 aaKnown RBP10.03□□□□□ -0.8
U2AF1-212ENST00000496462 DYNLL2Q96FJ2 89 aa10.03□□□□□ -0.8
U2AF1-212ENST00000496462 TAF1CQ15572 869 aaPredicted RBP10.03□□□□□ -0.8
U2AF1-212ENST00000496462 FAM47AQ5JRC9 791 aa10.03□□□□□ -0.8
U2AF1-212ENST00000496462 ZNF589Q86UQ0 364 aaPredicted RBP10.03□□□□□ -0.8
U2AF1-212ENST00000496462 DCAF4Q8WV16 495 aa10.03□□□□□ -0.8
U2AF1-212ENST00000496462 SMC3Q9UQE7 1217 aa10.03□□□□□ -0.8
U2AF1-212ENST00000496462 FLOT1O75955 427 aa10.02□□□□□ -0.8
U2AF1-212ENST00000496462 GRIK5Q16478 980 aa10.02□□□□□ -0.8
U2AF1-212ENST00000496462 PGAP2Q9UHJ9 254 aa10.02□□□□□ -0.8
U2AF1-212ENST00000496462 SYNPO2Q9UMS6 1093 aa10.02□□□□□ -0.8
U2AF1-212ENST00000496462 IRS2Q9Y4H2 1338 aa10.02□□□□□ -0.81
U2AF1-212ENST00000496462 KLF18A0A0U1RQI7 1052 aa10.02□□□□□ -0.81
U2AF1-212ENST00000496462 DDAH1O94760 285 aa10.02□□□□□ -0.81
U2AF1-212ENST00000496462 HSPA1AP0DMV8 641 aaKnown RBP10.02□□□□□ -0.81
U2AF1-212ENST00000496462 HSPA1BP0DMV9 641 aaKnown RBP10.02□□□□□ -0.81
U2AF1-212ENST00000496462 BMP3P12645 472 aa10.02□□□□□ -0.81
U2AF1-212ENST00000496462 CCDC148Q8NFR7 591 aa10.02□□□□□ -0.81
U2AF1-212ENST00000496462 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.02□□□□□ -0.81
U2AF1-212ENST00000496462 DICER1Q9UPY3 1922 aaKnown RBP10.02□□□□□ -0.81
U2AF1-212ENST00000496462 DDTLA6NHG4 134 aaPredicted RBP10.02□□□□□ -0.81
U2AF1-212ENST00000496462 WDR46O15213 610 aaKnown RBP10.02□□□□□ -0.81
U2AF1-212ENST00000496462 HSPA4P34932 840 aa10.02□□□□□ -0.81
U2AF1-212ENST00000496462 HMGN5P82970 282 aaKnown RBP10.02□□□□□ -0.81
U2AF1-212ENST00000496462 SSRP1Q08945 709 aaKnown RBP10.02□□□□□ -0.81
U2AF1-212ENST00000496462 SEPT2Q15019 361 aa10.02□□□□□ -0.81
U2AF1-212ENST00000496462 CAPNS2Q96L46 248 aa10.02□□□□□ -0.81
U2AF1-212ENST00000496462 USP26Q9BXU7 913 aa10.02□□□□□ -0.81
U2AF1-212ENST00000496462 LSG1Q9H089 658 aaKnown RBP10.02□□□□□ -0.81
U2AF1-212ENST00000496462 WDR90Q96KV7 1748 aa10.01□□□□□ -0.81
U2AF1-212ENST00000496462 CYP2D6P10635 497 aa10.01□□□□□ -0.81
U2AF1-212ENST00000496462 PNMA1Q8ND90 353 aa10.01□□□□□ -0.81
U2AF1-212ENST00000496462 OPTNQ96CV9 577 aa10.01□□□□□ -0.81
U2AF1-212ENST00000496462 FEM1BQ9UK73 627 aa10.01□□□□□ -0.81
U2AF1-212ENST00000496462 PASKQ96RG2 1323 aa10.01□□□□□ -0.81
U2AF1-212ENST00000496462 GCLCP48506 637 aaPredicted RBP10.01□□□□□ -0.81
U2AF1-212ENST00000496462 MKRN3Q13064 507 aaKnown RBP10.01□□□□□ -0.81
U2AF1-212ENST00000496462 MICU3Q86XE3 530 aa10.01□□□□□ -0.81
U2AF1-212ENST00000496462 MB21D1Q8N884 522 aa10.01□□□□□ -0.81
U2AF1-212ENST00000496462 BACH2Q9BYV9 841 aa10.01□□□□□ -0.81
U2AF1-212ENST00000496462 TNKSO95271 1327 aa10.01□□□□□ -0.81
U2AF1-212ENST00000496462 WDR19Q8NEZ3 1342 aa10.01□□□□□ -0.81
U2AF1-212ENST00000496462 MCTP2Q6DN12 878 aa10.01□□□□□ -0.81
U2AF1-212ENST00000496462 FBXO40Q9UH90 709 aa10.01□□□□□ -0.81
U2AF1-212ENST00000496462 LIMCH1Q9UPQ0 1083 aa10.01□□□□□ -0.81
U2AF1-212ENST00000496462 CST9Q5W186 159 aa10□□□□□ -0.81
U2AF1-212ENST00000496462 RUFY3Q7L099 469 aa10□□□□□ -0.81
U2AF1-212ENST00000496462 BRF1Q92994 677 aa10□□□□□ -0.81
U2AF1-212ENST00000496462 DDX11Q96FC9 970 aa10□□□□□ -0.81
U2AF1-212ENST00000496462 CYP2D7A0A087X1C5 515 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms