RNA–Protein interactions for RNA: ENST00000496340.1

NEPRO-224, Transcript of nucleolus and neural progenitor protein, humanhuman

TSL 4

Gene NEPRO, Length 520 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEPRO-224ENST00000496340 VPS53Q5VIR6 699 aa13.09□□□□□ -0.31
NEPRO-224ENST00000496340 ZSCAN25Q6NSZ9 544 aa13.09□□□□□ -0.31
NEPRO-224ENST00000496340 C16orf86Q6ZW13 317 aa13.09□□□□□ -0.31
NEPRO-224ENST00000496340 SH3TC2Q8TF17 1288 aa13.09□□□□□ -0.31
NEPRO-224ENST00000496340 FAM227BQ96M60 508 aa13.09□□□□□ -0.31
NEPRO-224ENST00000496340 FSD1Q9BTV5 496 aa13.09□□□□□ -0.31
NEPRO-224ENST00000496340 AS3MTQ9HBK9 375 aa13.09□□□□□ -0.31
NEPRO-224ENST00000496340 INCENPQ9NQS7 918 aa13.09□□□□□ -0.31
NEPRO-224ENST00000496340 RBPJLQ9UBG7 517 aa13.09□□□□□ -0.31
NEPRO-224ENST00000496340 CNMDO75829 334 aa13.08□□□□□ -0.32
NEPRO-224ENST00000496340 PRKCZQ05513 592 aa13.08□□□□□ -0.32
NEPRO-224ENST00000496340 SBK1Q52WX2 424 aa13.08□□□□□ -0.32
NEPRO-224ENST00000496340 NKX2-3Q8TAU0 364 aa13.08□□□□□ -0.32
NEPRO-224ENST00000496340 ARMC5Q96C12 935 aa13.08□□□□□ -0.32
NEPRO-224ENST00000496340 TBC1D2Q9BYX2 928 aa13.08□□□□□ -0.32
NEPRO-224ENST00000496340 GINM1Q9NU53 330 aa13.08□□□□□ -0.32
NEPRO-224ENST00000496340 A0A0D9SFI3 127 aa13.07□□□□□ -0.32
NEPRO-224ENST00000496340 C19orf81C9J6K1 198 aa13.07□□□□□ -0.32
NEPRO-224ENST00000496340 PATL2C9JE40 543 aaKnown RBP13.07□□□□□ -0.32
NEPRO-224ENST00000496340 MPHOSPH10O00566 681 aaKnown RBP13.07□□□□□ -0.32
NEPRO-224ENST00000496340 MYCP01106 439 aaPredicted RBP13.07□□□□□ -0.32
NEPRO-224ENST00000496340 ZFYP08048 801 aaPredicted RBP13.07□□□□□ -0.32
NEPRO-224ENST00000496340 USP17L2Q6R6M4 530 aa13.07□□□□□ -0.32
NEPRO-224ENST00000496340 IFNL3Q8IZI9 196 aa13.07□□□□□ -0.32
NEPRO-224ENST00000496340 C12orf42Q96LP6 360 aa13.07□□□□□ -0.32
NEPRO-224ENST00000496340 KIAA1683Q9H0B3 1180 aa13.07□□□□□ -0.32
NEPRO-224ENST00000496340 SRRDQ9UH36 339 aa13.07□□□□□ -0.32
NEPRO-224ENST00000496340 RLFQ13129 1914 aa13.07□□□□□ -0.32
NEPRO-224ENST00000496340 PLXNB2O15031 1838 aa13.06□□□□□ -0.32
NEPRO-224ENST00000496340 GREB1LQ9C091 1923 aaPredicted RBP13.06□□□□□ -0.32
NEPRO-224ENST00000496340 MINDY4BA8MYZ0 360 aa13.06□□□□□ -0.32
NEPRO-224ENST00000496340 PRDM1O75626 825 aa13.06□□□□□ -0.32
NEPRO-224ENST00000496340 FMNL1O95466 1100 aaPredicted RBP13.06□□□□□ -0.32
NEPRO-224ENST00000496340 VCAM1P19320 739 aa13.06□□□□□ -0.32
NEPRO-224ENST00000496340 RASA1P20936 1047 aa13.06□□□□□ -0.32
NEPRO-224ENST00000496340 HERVK_113P62684 666 aa13.06□□□□□ -0.32
NEPRO-224ENST00000496340 ZNF589Q86UQ0 364 aaPredicted RBP13.06□□□□□ -0.32
NEPRO-224ENST00000496340 SKAP1Q86WV1 359 aa13.06□□□□□ -0.32
NEPRO-224ENST00000496340 SMCR8Q8TEV9 937 aaPredicted RBP13.06□□□□□ -0.32
NEPRO-224ENST00000496340 EVI5LQ96CN4 794 aa13.06□□□□□ -0.32
NEPRO-224ENST00000496340 ZNF333Q96JL9 665 aa13.06□□□□□ -0.32
NEPRO-224ENST00000496340 OSBPL3Q9H4L5 887 aa13.06□□□□□ -0.32
NEPRO-224ENST00000496340 KIAA0100Q14667 2235 aaKnown RBP13.05□□□□□ -0.32
NEPRO-224ENST00000496340 MTFR1Q15390 333 aa13.05□□□□□ -0.32
NEPRO-224ENST00000496340 FAM110CQ1W6H9 321 aa13.05□□□□□ -0.32
NEPRO-224ENST00000496340 CATSPERGQ6ZRH7 1159 aa13.05□□□□□ -0.32
NEPRO-224ENST00000496340 PORCNQ9H237 461 aa13.05□□□□□ -0.32
NEPRO-224ENST00000496340 IL25Q9H293 177 aa13.05□□□□□ -0.32
NEPRO-224ENST00000496340 CABP5Q9NP86 173 aa13.05□□□□□ -0.32
NEPRO-224ENST00000496340 TMOD4Q9NZQ9 345 aa13.05□□□□□ -0.32
NEPRO-224ENST00000496340 MORF4L1Q9UBU8 362 aa13.05□□□□□ -0.32
NEPRO-224ENST00000496340 SWAP70Q9UH65 585 aa13.05□□□□□ -0.32
NEPRO-224ENST00000496340 GJD2Q9UKL4 321 aa13.05□□□□□ -0.32
NEPRO-224ENST00000496340 MYH8P13535 1937 aa13.05□□□□□ -0.32
NEPRO-224ENST00000496340 ROBO3Q96MS0 1386 aa13.05□□□□□ -0.32
NEPRO-224ENST00000496340 APPP05067 770 aa13.04□□□□□ -0.32
NEPRO-224ENST00000496340 EEF2P13639 858 aaKnown RBP13.04□□□□□ -0.32
NEPRO-224ENST00000496340 EN2P19622 333 aaPredicted RBP13.04□□□□□ -0.32
NEPRO-224ENST00000496340 FLT3LGP49771 235 aa13.04□□□□□ -0.32
NEPRO-224ENST00000496340 NMIQ13287 307 aaPredicted RBP13.04□□□□□ -0.32
NEPRO-224ENST00000496340 GIMAP6Q6P9H5 292 aa13.04□□□□□ -0.32
NEPRO-224ENST00000496340 TMEM179Q6ZVK1 233 aa13.04□□□□□ -0.32
NEPRO-224ENST00000496340 SPICE1Q8N0Z3 855 aa13.04□□□□□ -0.32
NEPRO-224ENST00000496340 FEZ1Q99689 392 aa13.04□□□□□ -0.32
NEPRO-224ENST00000496340 RPAP3Q9H6T3 665 aaPredicted RBP13.04□□□□□ -0.32
NEPRO-224ENST00000496340 BTBD7Q9P203 1132 aa13.04□□□□□ -0.32
NEPRO-224ENST00000496340 ARPP21Q9UBL0 812 aaPredicted RBP13.04□□□□□ -0.32
NEPRO-224ENST00000496340 MYPNQ86TC9 1320 aa13.04□□□□□ -0.32
NEPRO-224ENST00000496340 IGKV6D-41A0A0C4DH26 115 aa13.03□□□□□ -0.32
NEPRO-224ENST00000496340 GSPT1P15170 499 aaKnown RBP13.03□□□□□ -0.32
NEPRO-224ENST00000496340 ELNP15502 786 aa13.03□□□□□ -0.32
NEPRO-224ENST00000496340 FCGRTP55899 365 aa13.03□□□□□ -0.32
NEPRO-224ENST00000496340 IRX3P78415 501 aaPredicted RBP13.03□□□□□ -0.32
NEPRO-224ENST00000496340 CTDSPL2Q05D32 466 aa13.03□□□□□ -0.32
NEPRO-224ENST00000496340 KIF22Q14807 665 aa13.03□□□□□ -0.32
NEPRO-224ENST00000496340 RILPL2Q969X0 211 aa13.03□□□□□ -0.32
NEPRO-224ENST00000496340 NBPF3Q9H094 633 aa13.03□□□□□ -0.32
NEPRO-224ENST00000496340 PNMA3Q9UL41 463 aa13.03□□□□□ -0.32
NEPRO-224ENST00000496340 TMX2Q9Y320 296 aa13.03□□□□□ -0.32
NEPRO-224ENST00000496340 SPDYE16A6NNV3 312 aaPredicted RBP13.02□□□□□ -0.33
NEPRO-224ENST00000496340 USP17L15C9J2P7 530 aa13.02□□□□□ -0.33
NEPRO-224ENST00000496340 USP17L13C9JLJ4 530 aa13.02□□□□□ -0.33
NEPRO-224ENST00000496340 USP17L11C9JVI0 530 aa13.02□□□□□ -0.33
NEPRO-224ENST00000496340 USP17L18D6R9N7 530 aa13.02□□□□□ -0.33
NEPRO-224ENST00000496340 USP17L22D6RA61 530 aa13.02□□□□□ -0.33
NEPRO-224ENST00000496340 USP17L17D6RBQ6 530 aa13.02□□□□□ -0.33
NEPRO-224ENST00000496340 USP17L19D6RCP7 530 aa13.02□□□□□ -0.33
NEPRO-224ENST00000496340 USP17L20D6RJB6 530 aa13.02□□□□□ -0.33
NEPRO-224ENST00000496340 GNRH1P01148 92 aa13.02□□□□□ -0.33
NEPRO-224ENST00000496340 GNAT2P19087 354 aa13.02□□□□□ -0.33
NEPRO-224ENST00000496340 SDSP20132 328 aa13.02□□□□□ -0.33
NEPRO-224ENST00000496340 GCLCP48506 637 aaPredicted RBP13.02□□□□□ -0.33
NEPRO-224ENST00000496340 TDO2P48775 406 aa13.02□□□□□ -0.33
NEPRO-224ENST00000496340 ICA1Q05084 483 aa13.02□□□□□ -0.33
NEPRO-224ENST00000496340 USP17L24Q0WX57 530 aa13.02□□□□□ -0.33
NEPRO-224ENST00000496340 TRIM32Q13049 653 aa13.02□□□□□ -0.33
NEPRO-224ENST00000496340 SLC9C1Q4G0N8 1177 aa13.02□□□□□ -0.33
NEPRO-224ENST00000496340 FAM47AQ5JRC9 791 aa13.02□□□□□ -0.33
NEPRO-224ENST00000496340 TRIM6-TRIM34B2RNG4 842 aa13.01□□□□□ -0.33
NEPRO-224ENST00000496340 TNPO2O14787 897 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms