RNA–Protein interactions for RNA: ENST00000496335.1

PDAP1-204, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 302 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-204ENST00000496335 AKR1B1P15121 316 aa17.36■□□□□ 0.37
PDAP1-204ENST00000496335 HOXA7P31268 230 aaPredicted RBP17.36■□□□□ 0.37
PDAP1-204ENST00000496335 IRX3P78415 501 aaPredicted RBP17.36■□□□□ 0.37
PDAP1-204ENST00000496335 NUCB1Q02818 461 aa17.36■□□□□ 0.37
PDAP1-204ENST00000496335 ZMYM1Q5SVZ6 1142 aa17.36■□□□□ 0.37
PDAP1-204ENST00000496335 C16orf86Q6ZW13 317 aa17.36■□□□□ 0.37
PDAP1-204ENST00000496335 CHD1LQ86WJ1 897 aa17.36■□□□□ 0.37
PDAP1-204ENST00000496335 EPB41L4AQ9HCS5 686 aaPredicted RBP17.36■□□□□ 0.37
PDAP1-204ENST00000496335 SRRDQ9UH36 339 aa17.36■□□□□ 0.37
PDAP1-204ENST00000496335 A0A1W2PRG0 241 aa17.35■□□□□ 0.37
PDAP1-204ENST00000496335 PEX10O60683 326 aa17.35■□□□□ 0.37
PDAP1-204ENST00000496335 APPP05067 770 aa17.35■□□□□ 0.37
PDAP1-204ENST00000496335 GCLCP48506 637 aaPredicted RBP17.35■□□□□ 0.37
PDAP1-204ENST00000496335 FCGRTP55899 365 aa17.35■□□□□ 0.37
PDAP1-204ENST00000496335 GIMAP6Q6P9H5 292 aa17.35■□□□□ 0.37
PDAP1-204ENST00000496335 CLEC10AQ8IUN9 316 aa17.35■□□□□ 0.37
PDAP1-204ENST00000496335 STK11IPQ8N1F8 1099 aa17.35■□□□□ 0.37
PDAP1-204ENST00000496335 EVI5LQ96CN4 794 aa17.35■□□□□ 0.37
PDAP1-204ENST00000496335 KIAA1683Q9H0B3 1180 aa17.35■□□□□ 0.37
PDAP1-204ENST00000496335 ARPP21Q9UBL0 812 aaPredicted RBP17.35■□□□□ 0.37
PDAP1-204ENST00000496335 MINDY4BA8MYZ0 360 aa17.34■□□□□ 0.37
PDAP1-204ENST00000496335 GNAT2P19087 354 aa17.34■□□□□ 0.37
PDAP1-204ENST00000496335 HOXD10P28358 340 aa17.34■□□□□ 0.37
PDAP1-204ENST00000496335 FAM110CQ1W6H9 321 aa17.34■□□□□ 0.37
PDAP1-204ENST00000496335 SLC9C1Q4G0N8 1177 aa17.34■□□□□ 0.37
PDAP1-204ENST00000496335 SBK1Q52WX2 424 aa17.34■□□□□ 0.37
PDAP1-204ENST00000496335 CCDC129Q6ZRS4 1044 aa17.34■□□□□ 0.37
PDAP1-204ENST00000496335 TMEM179Q6ZVK1 233 aa17.34■□□□□ 0.37
PDAP1-204ENST00000496335 PLEKHM2Q8IWE5 1019 aa17.34■□□□□ 0.37
PDAP1-204ENST00000496335 SH3TC2Q8TF17 1288 aa17.34■□□□□ 0.37
PDAP1-204ENST00000496335 ARMC5Q96C12 935 aa17.34■□□□□ 0.37
PDAP1-204ENST00000496335 C12orf42Q96LP6 360 aa17.34■□□□□ 0.37
PDAP1-204ENST00000496335 TAOK2Q9UL54 1235 aa17.34■□□□□ 0.37
PDAP1-204ENST00000496335 MYPNQ86TC9 1320 aa17.33■□□□□ 0.36
PDAP1-204ENST00000496335 PATL2C9JE40 543 aaKnown RBP17.33■□□□□ 0.36
PDAP1-204ENST00000496335 TDO2P48775 406 aa17.33■□□□□ 0.36
PDAP1-204ENST00000496335 USP14P54578 494 aa17.33■□□□□ 0.36
PDAP1-204ENST00000496335 PRMT2P55345 433 aa17.33■□□□□ 0.36
PDAP1-204ENST00000496335 HERVK_113P62684 666 aa17.33■□□□□ 0.36
PDAP1-204ENST00000496335 MLLT1Q03111 559 aaPredicted RBP17.33■□□□□ 0.36
PDAP1-204ENST00000496335 PRKCZQ05513 592 aa17.33■□□□□ 0.36
PDAP1-204ENST00000496335 SIAH1Q8IUQ4 282 aa17.33■□□□□ 0.36
PDAP1-204ENST00000496335 IFNL3Q8IZI9 196 aa17.33■□□□□ 0.36
PDAP1-204ENST00000496335 CCDC17Q96LX7 622 aa17.33■□□□□ 0.36
PDAP1-204ENST00000496335 GABRQQ9UN88 632 aa17.33■□□□□ 0.36
PDAP1-204ENST00000496335 TRIM6-TRIM34B2RNG4 842 aa17.32■□□□□ 0.36
PDAP1-204ENST00000496335 TNPO2O14787 897 aaKnown RBP17.32■□□□□ 0.36
PDAP1-204ENST00000496335 MYCP01106 439 aaPredicted RBP17.32■□□□□ 0.36
PDAP1-204ENST00000496335 VCAM1P19320 739 aa17.32■□□□□ 0.36
PDAP1-204ENST00000496335 POTEEQ6S8J3 1075 aa17.32■□□□□ 0.36
PDAP1-204ENST00000496335 RAET1EQ8TD07 263 aa17.32■□□□□ 0.36
PDAP1-204ENST00000496335 ZNF333Q96JL9 665 aa17.32■□□□□ 0.36
PDAP1-204ENST00000496335 TXNRD2Q9NNW7 524 aa17.32■□□□□ 0.36
PDAP1-204ENST00000496335 POTEFA5A3E0 1075 aa17.31■□□□□ 0.36
PDAP1-204ENST00000496335 USP17L15C9J2P7 530 aa17.31■□□□□ 0.36
PDAP1-204ENST00000496335 USP17L13C9JLJ4 530 aa17.31■□□□□ 0.36
PDAP1-204ENST00000496335 USP17L11C9JVI0 530 aa17.31■□□□□ 0.36
PDAP1-204ENST00000496335 USP17L18D6R9N7 530 aa17.31■□□□□ 0.36
PDAP1-204ENST00000496335 USP17L22D6RA61 530 aa17.31■□□□□ 0.36
PDAP1-204ENST00000496335 USP17L17D6RBQ6 530 aa17.31■□□□□ 0.36
PDAP1-204ENST00000496335 USP17L19D6RCP7 530 aa17.31■□□□□ 0.36
PDAP1-204ENST00000496335 USP17L20D6RJB6 530 aa17.31■□□□□ 0.36
PDAP1-204ENST00000496335 USP17L24Q0WX57 530 aa17.31■□□□□ 0.36
PDAP1-204ENST00000496335 KIAA1755Q5JYT7 1200 aa17.31■□□□□ 0.36
PDAP1-204ENST00000496335 CATSPERGQ6ZRH7 1159 aa17.31■□□□□ 0.36
PDAP1-204ENST00000496335 NBPF11Q86T75 865 aa17.31■□□□□ 0.36
PDAP1-204ENST00000496335 RILPL2Q969X0 211 aa17.31■□□□□ 0.36
PDAP1-204ENST00000496335 RBPJLQ9UBG7 517 aa17.31■□□□□ 0.36
PDAP1-204ENST00000496335 MORF4L1Q9UBU8 362 aa17.31■□□□□ 0.36
PDAP1-204ENST00000496335 ROBO3Q96MS0 1386 aa17.3■□□□□ 0.36
PDAP1-204ENST00000496335 FOXP2O15409 715 aa17.3■□□□□ 0.36
PDAP1-204ENST00000496335 RASA1P20936 1047 aa17.3■□□□□ 0.36
PDAP1-204ENST00000496335 FLT3LGP49771 235 aa17.3■□□□□ 0.36
PDAP1-204ENST00000496335 ICA1Q05084 483 aa17.3■□□□□ 0.36
PDAP1-204ENST00000496335 Q3C1V9 767 aa17.3■□□□□ 0.36
PDAP1-204ENST00000496335 FAM227BQ96M60 508 aa17.3■□□□□ 0.36
PDAP1-204ENST00000496335 PAGR1Q9BTK6 254 aa17.3■□□□□ 0.36
PDAP1-204ENST00000496335 NACAP1Q9BZK3 213 aa17.3■□□□□ 0.36
PDAP1-204ENST00000496335 OSBPL3Q9H4L5 887 aa17.3■□□□□ 0.36
PDAP1-204ENST00000496335 RPAP3Q9H6T3 665 aaPredicted RBP17.3■□□□□ 0.36
PDAP1-204ENST00000496335 MKNK2Q9HBH9 465 aa17.3■□□□□ 0.36
PDAP1-204ENST00000496335 BRCA2P51587 3418 aa17.3■□□□□ 0.36
PDAP1-204ENST00000496335 A0A0D9SFI3 127 aa17.29■□□□□ 0.36
PDAP1-204ENST00000496335 PRDM1O75626 825 aa17.29■□□□□ 0.36
PDAP1-204ENST00000496335 EEF2P13639 858 aaKnown RBP17.29■□□□□ 0.36
PDAP1-204ENST00000496335 GRK4P32298 578 aa17.29■□□□□ 0.36
PDAP1-204ENST00000496335 ATP2B2Q01814 1243 aa17.29■□□□□ 0.36
PDAP1-204ENST00000496335 VPS53Q5VIR6 699 aa17.29■□□□□ 0.36
PDAP1-204ENST00000496335 GPRC5AQ8NFJ5 357 aa17.29■□□□□ 0.36
PDAP1-204ENST00000496335 COA7Q96BR5 231 aa17.29■□□□□ 0.36
PDAP1-204ENST00000496335 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.29■□□□□ 0.36
PDAP1-204ENST00000496335 NAPBQ9H115 298 aa17.29■□□□□ 0.36
PDAP1-204ENST00000496335 ARHGEF10LQ9HCE6 1279 aa17.29■□□□□ 0.36
PDAP1-204ENST00000496335 TMX2Q9Y320 296 aa17.29■□□□□ 0.36
PDAP1-204ENST00000496335 TNRC18O15417 2968 aaPredicted RBP17.29■□□□□ 0.36
PDAP1-204ENST00000496335 GREB1LQ9C091 1923 aaPredicted RBP17.29■□□□□ 0.36
PDAP1-204ENST00000496335 PDE4DIPQ5VU43 2346 aa17.29■□□□□ 0.36
PDAP1-204ENST00000496335 NMIQ13287 307 aaPredicted RBP17.28■□□□□ 0.36
PDAP1-204ENST00000496335 SPICE1Q8N0Z3 855 aa17.28■□□□□ 0.36
PDAP1-204ENST00000496335 KANSL2Q9H9L4 492 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms