RNA–Protein interactions for RNA: ENST00000496136.5

ECHDC3-205, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 1 (best)

Gene ECHDC3, Length 1,767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-205ENST00000496136 SENP2Q9HC62 589 aa25.62■■□□□ 1.69
ECHDC3-205ENST00000496136 ASNSP08243 561 aa25.61■■□□□ 1.69
ECHDC3-205ENST00000496136 LIFRP42702 1097 aa25.61■■□□□ 1.69
ECHDC3-205ENST00000496136 IREB2P48200 963 aaKnown RBP25.61■■□□□ 1.69
ECHDC3-205ENST00000496136 NOVP48745 357 aa25.61■■□□□ 1.69
ECHDC3-205ENST00000496136 TTLL12Q14166 644 aaPredicted RBP25.61■■□□□ 1.69
ECHDC3-205ENST00000496136 RAB3GAP1Q15042 981 aa25.61■■□□□ 1.69
ECHDC3-205ENST00000496136 SMC1BQ8NDV3 1235 aa25.61■■□□□ 1.69
ECHDC3-205ENST00000496136 BRF1Q92994 677 aa25.61■■□□□ 1.69
ECHDC3-205ENST00000496136 CELF2O95319 508 aaKnown RBP25.61■■□□□ 1.69
ECHDC3-205ENST00000496136 WTAPQ15007 396 aa25.61■■□□□ 1.69
ECHDC3-205ENST00000496136 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.61■■□□□ 1.69
ECHDC3-205ENST00000496136 CLEC10AQ8IUN9 316 aa25.61■■□□□ 1.69
ECHDC3-205ENST00000496136 ANKS1AQ92625 1134 aa25.61■■□□□ 1.69
ECHDC3-205ENST00000496136 LARP6Q9BRS8 491 aaKnown RBP25.61■■□□□ 1.69
ECHDC3-205ENST00000496136 GINM1Q9NU53 330 aa25.61■■□□□ 1.69
ECHDC3-205ENST00000496136 STX8Q9UNK0 236 aa25.61■■□□□ 1.69
ECHDC3-205ENST00000496136 CST9Q5W186 159 aa25.6■■□□□ 1.69
ECHDC3-205ENST00000496136 ARMC9Q7Z3E5 817 aa25.6■■□□□ 1.69
ECHDC3-205ENST00000496136 SIAH1Q8IUQ4 282 aa25.6■■□□□ 1.69
ECHDC3-205ENST00000496136 SCYL3Q8IZE3 742 aa25.6■■□□□ 1.69
ECHDC3-205ENST00000496136 TMTC2Q8N394 836 aa25.6■■□□□ 1.69
ECHDC3-205ENST00000496136 RBM46Q8TBY0 533 aaKnown RBP25.6■■□□□ 1.69
ECHDC3-205ENST00000496136 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.6■■□□□ 1.69
ECHDC3-205ENST00000496136 ATAD5Q96QE3 1844 aa25.6■■□□□ 1.69
ECHDC3-205ENST00000496136 ANKRD1Q15327 319 aa25.59■■□□□ 1.69
ECHDC3-205ENST00000496136 IFIT1BQ5T764 474 aaKnown RBP25.59■■□□□ 1.69
ECHDC3-205ENST00000496136 PASKQ96RG2 1323 aa25.58■■□□□ 1.69
ECHDC3-205ENST00000496136 TTLL1O95922 423 aa25.58■■□□□ 1.69
ECHDC3-205ENST00000496136 VGLL4Q14135 290 aa25.58■■□□□ 1.69
ECHDC3-205ENST00000496136 NOL9Q5SY16 702 aaKnown RBP25.58■■□□□ 1.69
ECHDC3-205ENST00000496136 SGMS1Q86VZ5 419 aa25.58■■□□□ 1.69
ECHDC3-205ENST00000496136 GBA2Q9HCG7 927 aaPredicted RBP25.58■■□□□ 1.69
ECHDC3-205ENST00000496136 NYAP2Q9P242 653 aa25.58■■□□□ 1.69
ECHDC3-205ENST00000496136 CLIP2Q9UDT6 1046 aa25.58■■□□□ 1.69
ECHDC3-205ENST00000496136 TRPM7Q96QT4 1865 aa25.58■■□□□ 1.68
ECHDC3-205ENST00000496136 UBE2Q2LH0YL09 131 aa25.57■■□□□ 1.68
ECHDC3-205ENST00000496136 EEF2P13639 858 aaKnown RBP25.57■■□□□ 1.68
ECHDC3-205ENST00000496136 FKBP1BP68106 108 aa25.57■■□□□ 1.68
ECHDC3-205ENST00000496136 ICA1Q05084 483 aa25.57■■□□□ 1.68
ECHDC3-205ENST00000496136 APOBRQ0VD83 1088 aa25.57■■□□□ 1.68
ECHDC3-205ENST00000496136 LDLRAD1Q5T700 205 aa25.57■■□□□ 1.68
ECHDC3-205ENST00000496136 ANKRD13AQ8IZ07 590 aa25.57■■□□□ 1.68
ECHDC3-205ENST00000496136 TMEM47Q9BQJ4 181 aa25.57■■□□□ 1.68
ECHDC3-205ENST00000496136 BRPF3Q9ULD4 1205 aa25.57■■□□□ 1.68
ECHDC3-205ENST00000496136 DOCK1Q14185 1865 aa25.57■■□□□ 1.68
ECHDC3-205ENST00000496136 EVCP57679 992 aa25.56■■□□□ 1.68
ECHDC3-205ENST00000496136 PPP4R3BQ5MIZ7 849 aa25.56■■□□□ 1.68
ECHDC3-205ENST00000496136 NOL8Q76FK4 1167 aaKnown RBP25.56■■□□□ 1.68
ECHDC3-205ENST00000496136 CCDC84Q86UT8 332 aaPredicted RBP25.56■■□□□ 1.68
ECHDC3-205ENST00000496136 C2orf69Q8N8R5 385 aa25.56■■□□□ 1.68
ECHDC3-205ENST00000496136 SNX21Q969T3 373 aa25.56■■□□□ 1.68
ECHDC3-205ENST00000496136 PICK1Q9NRD5 415 aa25.56■■□□□ 1.68
ECHDC3-205ENST00000496136 PTPRAP18433 802 aa25.56■■□□□ 1.68
ECHDC3-205ENST00000496136 ATP2B2Q01814 1243 aa25.56■■□□□ 1.68
ECHDC3-205ENST00000496136 NFXL1Q6ZNB6 911 aa25.56■■□□□ 1.68
ECHDC3-205ENST00000496136 MKL1Q969V6 931 aa25.56■■□□□ 1.68
ECHDC3-205ENST00000496136 TPCN1Q9ULQ1 816 aa25.56■■□□□ 1.68
ECHDC3-205ENST00000496136 CSADQ9Y600 493 aa25.56■■□□□ 1.68
ECHDC3-205ENST00000496136 PAPPA2Q9BXP8 1791 aa25.56■■□□□ 1.68
ECHDC3-205ENST00000496136 OTOFQ9HC10 1997 aa25.55■■□□□ 1.68
ECHDC3-205ENST00000496136 CCDC69A6NI79 296 aa25.55■■□□□ 1.68
ECHDC3-205ENST00000496136 USP17L5A8MUK1 530 aa25.55■■□□□ 1.68
ECHDC3-205ENST00000496136 TOP1P11387 765 aaKnown RBP25.55■■□□□ 1.68
ECHDC3-205ENST00000496136 LIMCH1Q9UPQ0 1083 aa25.55■■□□□ 1.68
ECHDC3-205ENST00000496136 SNCAIPQ9Y6H5 919 aa25.55■■□□□ 1.68
ECHDC3-205ENST00000496136 MYH4Q9Y623 1939 aa25.55■■□□□ 1.68
ECHDC3-205ENST00000496136 MCM2P49736 904 aa25.54■■□□□ 1.68
ECHDC3-205ENST00000496136 CLMNQ96JQ2 1002 aa25.54■■□□□ 1.68
ECHDC3-205ENST00000496136 KAT14Q9H8E8 782 aa25.54■■□□□ 1.68
ECHDC3-205ENST00000496136 KLF18A0A0U1RQI7 1052 aa25.54■■□□□ 1.68
ECHDC3-205ENST00000496136 A0A1W2PRG0 241 aa25.54■■□□□ 1.68
ECHDC3-205ENST00000496136 UNCXA6NJT0 531 aa25.54■■□□□ 1.68
ECHDC3-205ENST00000496136 ACER1Q8TDN7 264 aa25.54■■□□□ 1.68
ECHDC3-205ENST00000496136 SLC12A7Q9Y666 1083 aa25.54■■□□□ 1.68
ECHDC3-205ENST00000496136 ECE1P42892 770 aa25.53■■□□□ 1.68
ECHDC3-205ENST00000496136 APOA5Q6Q788 366 aa25.53■■□□□ 1.68
ECHDC3-205ENST00000496136 PNMA1Q8ND90 353 aa25.53■■□□□ 1.68
ECHDC3-205ENST00000496136 ZHX2Q9Y6X8 837 aa25.53■■□□□ 1.68
ECHDC3-205ENST00000496136 PDIA3P30101 505 aaKnown RBP25.52■■□□□ 1.68
ECHDC3-205ENST00000496136 C1QTNF8P60827 252 aa25.52■■□□□ 1.68
ECHDC3-205ENST00000496136 FSTL1Q12841 308 aa25.52■■□□□ 1.68
ECHDC3-205ENST00000496136 ZNF274Q96GC6 653 aaPredicted RBP25.52■■□□□ 1.68
ECHDC3-205ENST00000496136 ARHGEF10LQ9HCE6 1279 aa25.52■■□□□ 1.68
ECHDC3-205ENST00000496136 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.52■■□□□ 1.68
ECHDC3-205ENST00000496136 ME3Q16798 604 aa25.51■■□□□ 1.67
ECHDC3-205ENST00000496136 ZNF654Q8IZM8 581 aa25.51■■□□□ 1.67
ECHDC3-205ENST00000496136 LRRC47Q8N1G4 583 aaKnown RBP25.51■■□□□ 1.67
ECHDC3-205ENST00000496136 ELP3Q9H9T3 547 aa25.51■■□□□ 1.67
ECHDC3-205ENST00000496136 TMX2Q9Y320 296 aa25.51■■□□□ 1.67
ECHDC3-205ENST00000496136 TROAPQ12815 778 aa25.51■■□□□ 1.67
ECHDC3-205ENST00000496136 CATIPQ7Z7H3 387 aa25.51■■□□□ 1.67
ECHDC3-205ENST00000496136 MYL10Q9BUA6 226 aa25.51■■□□□ 1.67
ECHDC3-205ENST00000496136 WDR18Q9BV38 432 aa25.51■■□□□ 1.67
ECHDC3-205ENST00000496136 TBC1D2Q9BYX2 928 aa25.51■■□□□ 1.67
ECHDC3-205ENST00000496136 NAP1L2Q9ULW6 460 aaPredicted RBP25.51■■□□□ 1.67
ECHDC3-205ENST00000496136 ANP32AP39687 249 aaKnown RBP25.5■■□□□ 1.67
ECHDC3-205ENST00000496136 SYNE3Q6ZMZ3 975 aa25.5■■□□□ 1.67
ECHDC3-205ENST00000496136 HPS5Q9UPZ3 1129 aa25.5■■□□□ 1.67
ECHDC3-205ENST00000496136 PHIPQ8WWQ0 1821 aa25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms