RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 NOS3P29474 1203 aa7.99□□□□□ -1.13
SSR3-208ENST00000496050 POLR2BP30876 1174 aaKnown RBP7.99□□□□□ -1.13
SSR3-208ENST00000496050 PMS1P54277 932 aaKnown RBP7.99□□□□□ -1.13
SSR3-208ENST00000496050 MAP7Q14244 749 aa7.99□□□□□ -1.13
SSR3-208ENST00000496050 BAHD1Q8TBE0 780 aaPredicted RBP7.99□□□□□ -1.13
SSR3-208ENST00000496050 RNPC3Q96LT9 517 aaKnown RBP7.99□□□□□ -1.13
SSR3-208ENST00000496050 UBL7Q96S82 380 aaPredicted RBP7.99□□□□□ -1.13
SSR3-208ENST00000496050 DPH2Q9BQC3 489 aaPredicted RBP7.99□□□□□ -1.13
SSR3-208ENST00000496050 PCDHB10Q9UN67 800 aa7.99□□□□□ -1.13
SSR3-208ENST00000496050 CLEC3AO75596 197 aa7.98□□□□□ -1.13
SSR3-208ENST00000496050 NFICP08651 508 aa7.98□□□□□ -1.13
SSR3-208ENST00000496050 RAB6AP20340 208 aa7.98□□□□□ -1.13
SSR3-208ENST00000496050 COL8A1P27658 744 aa7.98□□□□□ -1.13
SSR3-208ENST00000496050 CDPF1Q6NVV7 123 aa7.98□□□□□ -1.13
SSR3-208ENST00000496050 UBE3DQ7Z6J8 389 aa7.98□□□□□ -1.13
SSR3-208ENST00000496050 LILRB2Q8N423 598 aa7.98□□□□□ -1.13
SSR3-208ENST00000496050 XAGE3Q8WTP9 111 aa7.98□□□□□ -1.13
SSR3-208ENST00000496050 FBLIM1Q8WUP2 373 aa7.98□□□□□ -1.13
SSR3-208ENST00000496050 FAM46AQ96IP4 442 aaKnown RBP7.98□□□□□ -1.13
SSR3-208ENST00000496050 SLC6A18Q96N87 628 aa7.98□□□□□ -1.13
SSR3-208ENST00000496050 SUCOQ9UBS9 1254 aaKnown RBP7.98□□□□□ -1.13
SSR3-208ENST00000496050 CEP131Q9UPN4 1083 aa7.98□□□□□ -1.13
SSR3-208ENST00000496050 DAGLAQ9Y4D2 1042 aa7.98□□□□□ -1.13
SSR3-208ENST00000496050 B2RBV5 119 aa7.97□□□□□ -1.13
SSR3-208ENST00000496050 UBOX5O94941 541 aa7.97□□□□□ -1.13
SSR3-208ENST00000496050 NAT2P11245 290 aa7.97□□□□□ -1.13
SSR3-208ENST00000496050 NCLP19338 710 aaKnown RBP7.97□□□□□ -1.13
SSR3-208ENST00000496050 RXRBP28702 533 aa7.97□□□□□ -1.13
SSR3-208ENST00000496050 ADGRE1Q14246 886 aa7.97□□□□□ -1.13
SSR3-208ENST00000496050 UVSSAQ2YD98 709 aa7.97□□□□□ -1.13
SSR3-208ENST00000496050 EGFLAMQ63HQ2 1017 aa7.97□□□□□ -1.13
SSR3-208ENST00000496050 ARMCX6Q7L4S7 300 aa7.97□□□□□ -1.13
SSR3-208ENST00000496050 TMEM192Q8IY95 271 aa7.97□□□□□ -1.13
SSR3-208ENST00000496050 NLGN1Q8N2Q7 840 aa7.97□□□□□ -1.13
SSR3-208ENST00000496050 SMARCC1Q92922 1105 aaPredicted RBP7.97□□□□□ -1.13
SSR3-208ENST00000496050 EPN3Q9H201 632 aa7.97□□□□□ -1.13
SSR3-208ENST00000496050 CWC22Q9HCG8 908 aaKnown RBP7.97□□□□□ -1.13
SSR3-208ENST00000496050 IQCA1LA6NCM1 817 aa7.96□□□□□ -1.14
SSR3-208ENST00000496050 BMP3P12645 472 aa7.96□□□□□ -1.14
SSR3-208ENST00000496050 MBTPS1Q14703 1052 aa7.96□□□□□ -1.14
SSR3-208ENST00000496050 GIMAP7Q8NHV1 300 aa7.96□□□□□ -1.14
SSR3-208ENST00000496050 SH3TC2Q8TF17 1288 aa7.96□□□□□ -1.14
SSR3-208ENST00000496050 EZH1Q92800 747 aaPredicted RBP7.96□□□□□ -1.14
SSR3-208ENST00000496050 APBA2Q99767 749 aa7.96□□□□□ -1.14
SSR3-208ENST00000496050 SEMA6CQ9H3T2 930 aa7.96□□□□□ -1.14
SSR3-208ENST00000496050 KDM2BQ8NHM5 1336 aa7.96□□□□□ -1.14
SSR3-208ENST00000496050 FAM95CA0A1B0GW59 222 aa7.95□□□□□ -1.14
SSR3-208ENST00000496050 TP53P04637 393 aaPredicted RBP7.95□□□□□ -1.14
SSR3-208ENST00000496050 ZNF143P52747 638 aaPredicted RBP7.95□□□□□ -1.14
SSR3-208ENST00000496050 SSRP1Q08945 709 aaKnown RBP7.95□□□□□ -1.14
SSR3-208ENST00000496050 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.95□□□□□ -1.14
SSR3-208ENST00000496050 TXNRD3Q86VQ6 643 aa7.95□□□□□ -1.14
SSR3-208ENST00000496050 DZIP1LQ8IYY4 767 aaKnown RBP7.95□□□□□ -1.14
SSR3-208ENST00000496050 THAP3Q8WTV1 239 aaPredicted RBP7.95□□□□□ -1.14
SSR3-208ENST00000496050 KLHL6Q8WZ60 621 aa7.95□□□□□ -1.14
SSR3-208ENST00000496050 UTP4Q969X6 686 aaKnown RBP7.95□□□□□ -1.14
SSR3-208ENST00000496050 MYRFLQ96LU7 910 aa7.95□□□□□ -1.14
SSR3-208ENST00000496050 PUS7Q96PZ0 661 aaKnown RBP7.95□□□□□ -1.14
SSR3-208ENST00000496050 LGR6Q9HBX8 967 aa7.95□□□□□ -1.14
SSR3-208ENST00000496050 ZMYM5Q9UJ78 669 aa7.95□□□□□ -1.14
SSR3-208ENST00000496050 SBNO2Q9Y2G9 1366 aa7.95□□□□□ -1.14
SSR3-208ENST00000496050 ANKRD62A6NC57 917 aa7.94□□□□□ -1.14
SSR3-208ENST00000496050 FAM181BA6NEQ2 426 aa7.94□□□□□ -1.14
SSR3-208ENST00000496050 ENPP3O14638 875 aa7.94□□□□□ -1.14
SSR3-208ENST00000496050 SUSD5O60279 629 aa7.94□□□□□ -1.14
SSR3-208ENST00000496050 HMGB1P09429 215 aaKnown RBP7.94□□□□□ -1.14
SSR3-208ENST00000496050 MAP4P27816 1152 aaKnown RBP7.94□□□□□ -1.14
SSR3-208ENST00000496050 TCEAL1Q15170 157 aa7.94□□□□□ -1.14
SSR3-208ENST00000496050 SGO2Q562F6 1265 aa7.94□□□□□ -1.14
SSR3-208ENST00000496050 MRM1Q6IN84 353 aaKnown RBP7.94□□□□□ -1.14
SSR3-208ENST00000496050 LETMD1Q6P1Q0 360 aa7.94□□□□□ -1.14
SSR3-208ENST00000496050 CCDC144CPQ8IYA2 1237 aa7.94□□□□□ -1.14
SSR3-208ENST00000496050 MIPEPQ99797 713 aa7.94□□□□□ -1.14
SSR3-208ENST00000496050 PRDM10Q9NQV6 1147 aa7.94□□□□□ -1.14
SSR3-208ENST00000496050 PFDN2Q9UHV9 154 aa7.94□□□□□ -1.14
SSR3-208ENST00000496050 ANKRD34BA5PLL1 514 aa7.93□□□□□ -1.14
SSR3-208ENST00000496050 AGRPO00253 132 aa7.93□□□□□ -1.14
SSR3-208ENST00000496050 CYP7A1P22680 504 aa7.93□□□□□ -1.14
SSR3-208ENST00000496050 ETV3P41162 512 aa7.93□□□□□ -1.14
SSR3-208ENST00000496050 NFKBIBQ15653 356 aa7.93□□□□□ -1.14
SSR3-208ENST00000496050 ANKRD39Q53RE8 183 aa7.93□□□□□ -1.14
SSR3-208ENST00000496050 HEATR6Q6AI08 1181 aaKnown RBP7.93□□□□□ -1.14
SSR3-208ENST00000496050 PAOXQ6QHF9 649 aa7.93□□□□□ -1.14
SSR3-208ENST00000496050 SPATC1Q76KD6 591 aa7.93□□□□□ -1.14
SSR3-208ENST00000496050 CDH24Q86UP0 819 aa7.93□□□□□ -1.14
SSR3-208ENST00000496050 HOMER1Q86YM7 354 aa7.93□□□□□ -1.14
SSR3-208ENST00000496050 FAM20CQ8IXL6 584 aa7.93□□□□□ -1.14
SSR3-208ENST00000496050 PPP1R13LQ8WUF5 828 aa7.93□□□□□ -1.14
SSR3-208ENST00000496050 APPBP2Q92624 585 aa7.93□□□□□ -1.14
SSR3-208ENST00000496050 PSMG3-AS1Q96PY0 264 aa7.93□□□□□ -1.14
SSR3-208ENST00000496050 KCNF1Q9H3M0 494 aa7.93□□□□□ -1.14
SSR3-208ENST00000496050 DHX15O43143 795 aaKnown RBP7.92□□□□□ -1.14
SSR3-208ENST00000496050 RNF4P78317 190 aa7.92□□□□□ -1.14
SSR3-208ENST00000496050 SV2CQ496J9 727 aa7.92□□□□□ -1.14
SSR3-208ENST00000496050 NBPF12Q5TAG4 269 aaPredicted RBP7.92□□□□□ -1.14
SSR3-208ENST00000496050 LRRC47Q8N1G4 583 aaKnown RBP7.92□□□□□ -1.14
SSR3-208ENST00000496050 JMYQ8N9B5 988 aa7.92□□□□□ -1.14
SSR3-208ENST00000496050 DNAJB8Q8NHS0 232 aa7.92□□□□□ -1.14
SSR3-208ENST00000496050 RIN3Q8TB24 985 aa7.92□□□□□ -1.14
SSR3-208ENST00000496050 SGSM3Q96HU1 749 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms