RNA–Protein interactions for RNA: ENST00000495910.6

NF1-216, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 8,223 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-216ENST00000495910 KIF1BPQ96EK5 621 aa5.69□□□□□ -1.5
NF1-216ENST00000495910 RRP36Q96EU6 259 aaKnown RBP5.69□□□□□ -1.5
NF1-216ENST00000495910 MIA2Q96PC5 1412 aa5.69□□□□□ -1.5
NF1-216ENST00000495910 TBC1D2Q9BYX2 928 aa5.69□□□□□ -1.5
NF1-216ENST00000495910 ACTR5Q9H9F9 607 aaPredicted RBP5.69□□□□□ -1.5
NF1-216ENST00000495910 RIC8AQ9NPQ8 531 aa5.69□□□□□ -1.5
NF1-216ENST00000495910 JRKLQ9Y4A0 524 aa5.69□□□□□ -1.5
NF1-216ENST00000495910 RTL1A6NKG5 1358 aa5.69□□□□□ -1.5
NF1-216ENST00000495910 MINK1Q8N4C8 1332 aaPredicted RBP5.69□□□□□ -1.5
NF1-216ENST00000495910 ARHGAP6O43182 974 aa5.69□□□□□ -1.5
NF1-216ENST00000495910 ESRRBO95718 433 aa5.69□□□□□ -1.5
NF1-216ENST00000495910 GSNP06396 782 aa5.69□□□□□ -1.5
NF1-216ENST00000495910 EPB41P11171 864 aaKnown RBP5.69□□□□□ -1.5
NF1-216ENST00000495910 APBA1Q02410 837 aa5.69□□□□□ -1.5
NF1-216ENST00000495910 CNGA2Q16280 664 aa5.69□□□□□ -1.5
NF1-216ENST00000495910 METTL24Q5JXM2 366 aa5.69□□□□□ -1.5
NF1-216ENST00000495910 ATAD3BQ5T9A4 648 aa5.69□□□□□ -1.5
NF1-216ENST00000495910 FAM180AQ6UWF9 173 aa5.69□□□□□ -1.5
NF1-216ENST00000495910 KLHL29Q96CT2 875 aa5.69□□□□□ -1.5
NF1-216ENST00000495910 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.69□□□□□ -1.5
NF1-216ENST00000495910 UPF3AQ9H1J1 476 aaKnown RBP5.69□□□□□ -1.5
NF1-216ENST00000495910 RRP15Q9Y3B9 282 aaKnown RBP5.69□□□□□ -1.5
NF1-216ENST00000495910 SMG6Q86US8 1419 aaKnown RBP5.69□□□□□ -1.5
NF1-216ENST00000495910 hCG_2014768A0A024R1R8 64 aa5.69□□□□□ -1.5
NF1-216ENST00000495910 A0A087WUV0 522 aaPredicted RBP5.69□□□□□ -1.5
NF1-216ENST00000495910 THAP12O43422 761 aa5.69□□□□□ -1.5
NF1-216ENST00000495910 DNAJC6O75061 913 aa5.69□□□□□ -1.5
NF1-216ENST00000495910 ZSCAN22P10073 491 aaPredicted RBP5.69□□□□□ -1.5
NF1-216ENST00000495910 HMGB2P26583 209 aaKnown RBP5.69□□□□□ -1.5
NF1-216ENST00000495910 RCN2Q14257 317 aa5.69□□□□□ -1.5
NF1-216ENST00000495910 C6orf118Q5T5N4 469 aa5.69□□□□□ -1.5
NF1-216ENST00000495910 ST13P5Q8NFI4 369 aaPredicted RBP5.69□□□□□ -1.5
NF1-216ENST00000495910 YIPF3Q9GZM5 350 aa5.69□□□□□ -1.5
NF1-216ENST00000495910 IL1RAPL2Q9NP60 686 aa5.69□□□□□ -1.5
NF1-216ENST00000495910 IFNKQ9P0W0 207 aa5.69□□□□□ -1.5
NF1-216ENST00000495910 PRG3Q9Y2Y8 225 aaPredicted RBP5.69□□□□□ -1.5
NF1-216ENST00000495910 RAB3GAP2Q9H2M9 1393 aa5.69□□□□□ -1.5
NF1-216ENST00000495910 RASGRF2O14827 1237 aa5.69□□□□□ -1.5
NF1-216ENST00000495910 ECE1P42892 770 aa5.69□□□□□ -1.5
NF1-216ENST00000495910 IL9RQ01113 521 aa5.69□□□□□ -1.5
NF1-216ENST00000495910 HDAC1Q13547 482 aaPredicted RBP5.69□□□□□ -1.5
NF1-216ENST00000495910 ARMCX6Q7L4S7 300 aa5.69□□□□□ -1.5
NF1-216ENST00000495910 RNF169Q8NCN4 708 aa5.69□□□□□ -1.5
NF1-216ENST00000495910 OMA1Q96E52 524 aa5.69□□□□□ -1.5
NF1-216ENST00000495910 VAT1LQ9HCJ6 419 aa5.69□□□□□ -1.5
NF1-216ENST00000495910 C6orf50Q9HD87 102 aa5.69□□□□□ -1.5
NF1-216ENST00000495910 IPO11Q9UI26 975 aaKnown RBP5.69□□□□□ -1.5
NF1-216ENST00000495910 STRIP2Q9ULQ0 834 aa5.69□□□□□ -1.5
NF1-216ENST00000495910 CCDC78A2IDD5 438 aa5.69□□□□□ -1.5
NF1-216ENST00000495910 GUCY2CP25092 1073 aa5.69□□□□□ -1.5
NF1-216ENST00000495910 PDE4BQ07343 736 aa5.69□□□□□ -1.5
NF1-216ENST00000495910 ARMC2Q8NEN0 867 aa5.69□□□□□ -1.5
NF1-216ENST00000495910 VTI1AQ96AJ9 217 aa5.69□□□□□ -1.5
NF1-216ENST00000495910 PHF21AQ96BD5 680 aa5.69□□□□□ -1.5
NF1-216ENST00000495910 C10orf88Q9H8K7 445 aa5.69□□□□□ -1.5
NF1-216ENST00000495910 KAT6BQ8WYB5 2073 aa5.69□□□□□ -1.5
NF1-216ENST00000495910 B4DLN1 442 aa5.68□□□□□ -1.5
NF1-216ENST00000495910 RFX1P22670 979 aa5.68□□□□□ -1.5
NF1-216ENST00000495910 LMOD1P29536 600 aaPredicted RBP5.68□□□□□ -1.5
NF1-216ENST00000495910 MRPL12P52815 198 aaKnown RBP5.68□□□□□ -1.5
NF1-216ENST00000495910 RNASE9P60153 205 aaKnown RBP5.68□□□□□ -1.5
NF1-216ENST00000495910 SLC9C1Q4G0N8 1177 aa5.68□□□□□ -1.5
NF1-216ENST00000495910 CC2D2BQ6DHV5 1058 aa5.68□□□□□ -1.5
NF1-216ENST00000495910 PRPF38AQ8NAV1 312 aaKnown RBP5.68□□□□□ -1.5
NF1-216ENST00000495910 FGFR1OP2Q9NVK5 253 aa5.68□□□□□ -1.5
NF1-216ENST00000495910 SPDYE16A6NNV3 312 aaPredicted RBP5.68□□□□□ -1.5
NF1-216ENST00000495910 TSC22D1Q15714 1073 aa5.68□□□□□ -1.5
NF1-216ENST00000495910 SPDYE2Q495Y8 402 aa5.68□□□□□ -1.5
NF1-216ENST00000495910 OGFOD1Q8N543 542 aa5.68□□□□□ -1.5
NF1-216ENST00000495910 RAD21L1Q9H4I0 556 aa5.68□□□□□ -1.5
NF1-216ENST00000495910 ARHGAP26Q9UNA1 814 aa5.68□□□□□ -1.5
NF1-216ENST00000495910 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.68□□□□□ -1.5
NF1-216ENST00000495910 CCDC144AA2RUR9 1427 aa5.68□□□□□ -1.5
NF1-216ENST00000495910 SLC9A1P19634 815 aa5.68□□□□□ -1.5
NF1-216ENST00000495910 IRX1P78414 480 aaPredicted RBP5.68□□□□□ -1.5
NF1-216ENST00000495910 KCNA1Q09470 495 aa5.68□□□□□ -1.5
NF1-216ENST00000495910 MYRIPQ8NFW9 859 aa5.68□□□□□ -1.5
NF1-216ENST00000495910 RSAD2Q8WXG1 361 aa5.68□□□□□ -1.5
NF1-216ENST00000495910 ZFYVE19Q96K21 471 aa5.68□□□□□ -1.5
NF1-216ENST00000495910 TYW1Q9NV66 732 aaKnown RBP5.68□□□□□ -1.5
NF1-216ENST00000495910 NOP53Q9NZM5 478 aaKnown RBP5.68□□□□□ -1.5
NF1-216ENST00000495910 GOLGA8IPA6NC78 632 aa5.68□□□□□ -1.5
NF1-216ENST00000495910 ADCY3O60266 1144 aa5.68□□□□□ -1.5
NF1-216ENST00000495910 NUP62P37198 522 aaPredicted RBP5.68□□□□□ -1.5
NF1-216ENST00000495910 KRT79Q5XKE5 535 aa5.68□□□□□ -1.5
NF1-216ENST00000495910 ING2Q9H160 280 aa5.68□□□□□ -1.5
NF1-216ENST00000495910 TRAF5O00463 557 aa5.68□□□□□ -1.5
NF1-216ENST00000495910 SPAG7O75391 227 aa5.68□□□□□ -1.5
NF1-216ENST00000495910 MED21Q13503 144 aa5.68□□□□□ -1.5
NF1-216ENST00000495910 IQCB1Q15051 598 aa5.68□□□□□ -1.5
NF1-216ENST00000495910 DCAF17Q5H9S7 520 aaPredicted RBP5.68□□□□□ -1.5
NF1-216ENST00000495910 TJAP1Q5JTD0 557 aa5.68□□□□□ -1.5
NF1-216ENST00000495910 TEDDM1Q5T9Z0 273 aa5.68□□□□□ -1.5
NF1-216ENST00000495910 RCSD1Q6JBY9 416 aa5.68□□□□□ -1.5
NF1-216ENST00000495910 TCP11Q8WWU5 503 aa5.68□□□□□ -1.5
NF1-216ENST00000495910 FNBP1Q96RU3 617 aa5.68□□□□□ -1.5
NF1-216ENST00000495910 AIPL1Q9NZN9 384 aa5.68□□□□□ -1.5
NF1-216ENST00000495910 CNTLNQ9NXG0 1405 aa5.68□□□□□ -1.5
NF1-216ENST00000495910 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.68□□□□□ -1.5
NF1-216ENST00000495910 CDC40O60508 579 aaKnown RBP eCLIP5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms