RNA–Protein interactions for RNA: ENST00000495288.5

PSMB4-206, Transcript of proteasome subunit beta 4, humanhuman

TSL 2

Gene PSMB4, Length 986 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-206ENST00000495288 FANCBQ8NB91 859 aa20.47■□□□□ 0.87
PSMB4-206ENST00000495288 NSUN7Q8NE18 718 aaKnown RBP20.47■□□□□ 0.87
PSMB4-206ENST00000495288 TMEM47Q9BQJ4 181 aa20.47■□□□□ 0.87
PSMB4-206ENST00000495288 GGA3Q9NZ52 723 aa20.47■□□□□ 0.87
PSMB4-206ENST00000495288 PGAP2Q9UHJ9 254 aa20.47■□□□□ 0.87
PSMB4-206ENST00000495288 MTMR7Q9Y216 660 aa20.47■□□□□ 0.87
PSMB4-206ENST00000495288 PTPDC1A2A3K4 754 aa20.46■□□□□ 0.87
PSMB4-206ENST00000495288 GDF11O95390 407 aa20.46■□□□□ 0.87
PSMB4-206ENST00000495288 CALM1P0DP23 149 aa20.46■□□□□ 0.87
PSMB4-206ENST00000495288 CALM2P0DP24 149 aa20.46■□□□□ 0.87
PSMB4-206ENST00000495288 CALM3P0DP25 149 aa20.46■□□□□ 0.87
PSMB4-206ENST00000495288 CDC27P30260 824 aa20.46■□□□□ 0.87
PSMB4-206ENST00000495288 CABP5Q9NP86 173 aa20.46■□□□□ 0.87
PSMB4-206ENST00000495288 CLIP2Q9UDT6 1046 aa20.46■□□□□ 0.87
PSMB4-206ENST00000495288 ZC3H4Q9UPT8 1303 aaKnown RBP20.46■□□□□ 0.87
PSMB4-206ENST00000495288 CCDC196A0A1B0GTZ2 297 aa20.45■□□□□ 0.86
PSMB4-206ENST00000495288 TBC1D12O60347 775 aa20.45■□□□□ 0.86
PSMB4-206ENST00000495288 CDKL5O76039 1030 aa20.45■□□□□ 0.86
PSMB4-206ENST00000495288 DDAH1O94760 285 aa20.45■□□□□ 0.86
PSMB4-206ENST00000495288 TOP1P11387 765 aaKnown RBP20.45■□□□□ 0.86
PSMB4-206ENST00000495288 FOXD4L5Q5VV16 416 aaPredicted RBP20.45■□□□□ 0.86
PSMB4-206ENST00000495288 PNMA1Q8ND90 353 aa20.45■□□□□ 0.86
PSMB4-206ENST00000495288 SMARCC2Q8TAQ2 1214 aa20.45■□□□□ 0.86
PSMB4-206ENST00000495288 FOXD4L4Q8WXT5 416 aaPredicted RBP20.45■□□□□ 0.86
PSMB4-206ENST00000495288 FAM217BQ9NTX9 383 aaPredicted RBP20.45■□□□□ 0.86
PSMB4-206ENST00000495288 MTMR4Q9NYA4 1195 aa20.45■□□□□ 0.86
PSMB4-206ENST00000495288 IGKV6D-41A0A0C4DH26 115 aa20.44■□□□□ 0.86
PSMB4-206ENST00000495288 RCAN1P53805 252 aa20.44■□□□□ 0.86
PSMB4-206ENST00000495288 HMGN5P82970 282 aaKnown RBP20.44■□□□□ 0.86
PSMB4-206ENST00000495288 RRP1BQ14684 758 aaKnown RBP20.44■□□□□ 0.86
PSMB4-206ENST00000495288 SHROOM1Q2M3G4 852 aaPredicted RBP20.44■□□□□ 0.86
PSMB4-206ENST00000495288 PRAMEF18Q5VWM3 479 aa20.44■□□□□ 0.86
PSMB4-206ENST00000495288 LARP1BQ659C4 914 aaKnown RBP20.44■□□□□ 0.86
PSMB4-206ENST00000495288 CLEC10AQ8IUN9 316 aa20.44■□□□□ 0.86
PSMB4-206ENST00000495288 CTCFLQ8NI51 663 aaPredicted RBP20.44■□□□□ 0.86
PSMB4-206ENST00000495288 DCPSQ96C86 337 aaKnown RBP20.44■□□□□ 0.86
PSMB4-206ENST00000495288 L3MBTL3Q96JM7 780 aaPredicted RBP20.44■□□□□ 0.86
PSMB4-206ENST00000495288 TEPSINQ96N21 525 aa20.44■□□□□ 0.86
PSMB4-206ENST00000495288 GH2P01242 217 aa20.43■□□□□ 0.86
PSMB4-206ENST00000495288 EPHX2P34913 555 aa20.43■□□□□ 0.86
PSMB4-206ENST00000495288 TROAPQ12815 778 aa20.43■□□□□ 0.86
PSMB4-206ENST00000495288 SEPT2Q15019 361 aa20.43■□□□□ 0.86
PSMB4-206ENST00000495288 RAB3GAP1Q15042 981 aa20.43■□□□□ 0.86
PSMB4-206ENST00000495288 PPP4R3BQ5MIZ7 849 aa20.43■□□□□ 0.86
PSMB4-206ENST00000495288 NBPF12Q5TAG4 269 aaPredicted RBP20.43■□□□□ 0.86
PSMB4-206ENST00000495288 TMEM179Q6ZVK1 233 aa20.43■□□□□ 0.86
PSMB4-206ENST00000495288 ORC3Q9UBD5 711 aaPredicted RBP20.43■□□□□ 0.86
PSMB4-206ENST00000495288 KIF3AQ9Y496 699 aa20.43■□□□□ 0.86
PSMB4-206ENST00000495288 PLIN4Q96Q06 1357 aa20.43■□□□□ 0.86
PSMB4-206ENST00000495288 SIPA1L1O43166 1804 aa20.42■□□□□ 0.86
PSMB4-206ENST00000495288 TTLL1O95922 423 aa20.42■□□□□ 0.86
PSMB4-206ENST00000495288 PDCP20941 246 aa20.42■□□□□ 0.86
PSMB4-206ENST00000495288 SYT1P21579 422 aa20.42■□□□□ 0.86
PSMB4-206ENST00000495288 FOSBP53539 338 aa20.42■□□□□ 0.86
PSMB4-206ENST00000495288 JAG1P78504 1218 aa20.42■□□□□ 0.86
PSMB4-206ENST00000495288 SSRP1Q08945 709 aaKnown RBP20.42■□□□□ 0.86
PSMB4-206ENST00000495288 PKP1Q13835 747 aa20.42■□□□□ 0.86
PSMB4-206ENST00000495288 PPP2R5BQ15173 497 aa20.42■□□□□ 0.86
PSMB4-206ENST00000495288 USP50Q70EL3 339 aaPredicted RBP20.42■□□□□ 0.86
PSMB4-206ENST00000495288 CCDC82Q8N4S0 544 aa20.42■□□□□ 0.86
PSMB4-206ENST00000495288 KANSL2Q9H9L4 492 aa20.42■□□□□ 0.86
PSMB4-206ENST00000495288 RBM28Q9NW13 759 aaKnown RBP20.42■□□□□ 0.86
PSMB4-206ENST00000495288 GOLGB1Q14789 3259 aaKnown RBP20.42■□□□□ 0.86
PSMB4-206ENST00000495288 KIF5BP33176 963 aa20.41■□□□□ 0.86
PSMB4-206ENST00000495288 EAPPQ56P03 285 aaPredicted RBP20.41■□□□□ 0.86
PSMB4-206ENST00000495288 CMTR1Q8N1G2 835 aaKnown RBP20.41■□□□□ 0.86
PSMB4-206ENST00000495288 LRRC47Q8N1G4 583 aaKnown RBP20.41■□□□□ 0.86
PSMB4-206ENST00000495288 PHKBQ93100 1093 aa20.41■□□□□ 0.86
PSMB4-206ENST00000495288 HOOK2Q96ED9 719 aa20.41■□□□□ 0.86
PSMB4-206ENST00000495288 SLC26A6Q9BXS9 759 aa20.41■□□□□ 0.86
PSMB4-206ENST00000495288 VPS37CA5D8V6 355 aaPredicted RBP20.4■□□□□ 0.86
PSMB4-206ENST00000495288 IQCA1LA6NCM1 817 aa20.4■□□□□ 0.86
PSMB4-206ENST00000495288 STX6O43752 255 aa20.4■□□□□ 0.86
PSMB4-206ENST00000495288 EEF2P13639 858 aaKnown RBP20.4■□□□□ 0.86
PSMB4-206ENST00000495288 NOVP48745 357 aa20.4■□□□□ 0.86
PSMB4-206ENST00000495288 MAP3K10Q02779 954 aa20.4■□□□□ 0.86
PSMB4-206ENST00000495288 DCAF15Q66K64 600 aa20.4■□□□□ 0.86
PSMB4-206ENST00000495288 SULF1Q8IWU6 871 aa20.4■□□□□ 0.86
PSMB4-206ENST00000495288 WDR33Q9C0J8 1336 aaKnown RBP20.4■□□□□ 0.86
PSMB4-206ENST00000495288 NID2Q14112 1375 aa20.39■□□□□ 0.85
PSMB4-206ENST00000495288 PITPNM2Q9BZ72 1349 aa20.39■□□□□ 0.85
PSMB4-206ENST00000495288 RAD21O60216 631 aa20.39■□□□□ 0.85
PSMB4-206ENST00000495288 PLEKHA8P1O95397 391 aa20.39■□□□□ 0.85
PSMB4-206ENST00000495288 FDPSP14324 419 aaKnown RBP20.39■□□□□ 0.85
PSMB4-206ENST00000495288 IFNAR1P17181 557 aa20.39■□□□□ 0.85
PSMB4-206ENST00000495288 GUCY1A2P33402 732 aa20.39■□□□□ 0.85
PSMB4-206ENST00000495288 ICA1Q05084 483 aa20.39■□□□□ 0.85
PSMB4-206ENST00000495288 GRM4Q14833 912 aa20.39■□□□□ 0.85
PSMB4-206ENST00000495288 NTRK3Q16288 839 aa20.39■□□□□ 0.85
PSMB4-206ENST00000495288 TRIM22Q8IYM9 498 aa20.39■□□□□ 0.85
PSMB4-206ENST00000495288 TAF1DQ9H5J8 278 aaPredicted RBP20.39■□□□□ 0.85
PSMB4-206ENST00000495288 NYAP2Q9P242 653 aa20.39■□□□□ 0.85
PSMB4-206ENST00000495288 ZDHHC9Q9Y397 364 aa20.39■□□□□ 0.85
PSMB4-206ENST00000495288 PPP2R3BQ9Y5P8 575 aa20.39■□□□□ 0.85
PSMB4-206ENST00000495288 MYH8P13535 1937 aa20.39■□□□□ 0.85
PSMB4-206ENST00000495288 H3BQV1 296 aa20.38■□□□□ 0.85
PSMB4-206ENST00000495288 FMNL1O95466 1100 aaPredicted RBP20.38■□□□□ 0.85
PSMB4-206ENST00000495288 CAP2P40123 477 aa20.38■□□□□ 0.85
PSMB4-206ENST00000495288 AKAP17AQ02040 695 aaKnown RBP20.38■□□□□ 0.85
PSMB4-206ENST00000495288 SUPT20HL1Q3ZLR7 823 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms