RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 SZT2Q5T011 3432 aa26.8■■□□□ 1.88
HDDC3-203ENST00000494993 PDE6AP16499 860 aa26.8■■□□□ 1.88
HDDC3-203ENST00000494993 SHMT1P34896 483 aa26.8■■□□□ 1.88
HDDC3-203ENST00000494993 USP14P54578 494 aa26.8■■□□□ 1.88
HDDC3-203ENST00000494993 SLC9C2Q5TAH2 1124 aa26.8■■□□□ 1.88
HDDC3-203ENST00000494993 MAP3K21Q5TCX8 1036 aa26.8■■□□□ 1.88
HDDC3-203ENST00000494993 GPR142Q7Z601 462 aa26.8■■□□□ 1.88
HDDC3-203ENST00000494993 CCAR1Q8IX12 1150 aaKnown RBP26.8■■□□□ 1.88
HDDC3-203ENST00000494993 RPAP2Q8IXW5 612 aaPredicted RBP26.8■■□□□ 1.88
HDDC3-203ENST00000494993 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.8■■□□□ 1.88
HDDC3-203ENST00000494993 USP17L15C9J2P7 530 aa26.79■■□□□ 1.88
HDDC3-203ENST00000494993 USP17L13C9JLJ4 530 aa26.79■■□□□ 1.88
HDDC3-203ENST00000494993 USP17L11C9JVI0 530 aa26.79■■□□□ 1.88
HDDC3-203ENST00000494993 USP17L18D6R9N7 530 aa26.79■■□□□ 1.88
HDDC3-203ENST00000494993 USP17L22D6RA61 530 aa26.79■■□□□ 1.88
HDDC3-203ENST00000494993 USP17L17D6RBQ6 530 aa26.79■■□□□ 1.88
HDDC3-203ENST00000494993 USP17L19D6RCP7 530 aa26.79■■□□□ 1.88
HDDC3-203ENST00000494993 USP17L20D6RJB6 530 aa26.79■■□□□ 1.88
HDDC3-203ENST00000494993 APBB1O00213 710 aa26.79■■□□□ 1.88
HDDC3-203ENST00000494993 USP17L24Q0WX57 530 aa26.79■■□□□ 1.88
HDDC3-203ENST00000494993 TRMT44Q8IYL2 757 aaKnown RBP26.79■■□□□ 1.88
HDDC3-203ENST00000494993 USP6NLQ92738 828 aa26.79■■□□□ 1.88
HDDC3-203ENST00000494993 CRNKL1Q9BZJ0 848 aaKnown RBP26.79■■□□□ 1.88
HDDC3-203ENST00000494993 KIAA1683Q9H0B3 1180 aa26.79■■□□□ 1.88
HDDC3-203ENST00000494993 CABP5Q9NP86 173 aa26.79■■□□□ 1.88
HDDC3-203ENST00000494993 HMMRO75330 724 aa26.78■■□□□ 1.88
HDDC3-203ENST00000494993 POLR3DP05423 398 aaPredicted RBP26.78■■□□□ 1.88
HDDC3-203ENST00000494993 PRKAR2AP13861 404 aaKnown RBP26.78■■□□□ 1.88
HDDC3-203ENST00000494993 PLEKHH3Q7Z736 793 aa26.78■■□□□ 1.88
HDDC3-203ENST00000494993 ACER1Q8TDN7 264 aa26.78■■□□□ 1.88
HDDC3-203ENST00000494993 DDX19BQ9UMR2 479 aa26.78■■□□□ 1.88
HDDC3-203ENST00000494993 RABGAP1Q9Y3P9 1069 aa26.78■■□□□ 1.88
HDDC3-203ENST00000494993 ZNF532Q9HCE3 1301 aa26.77■■□□□ 1.88
HDDC3-203ENST00000494993 GOLIM4O00461 696 aa26.77■■□□□ 1.88
HDDC3-203ENST00000494993 IFIT2P09913 472 aaKnown RBP26.77■■□□□ 1.88
HDDC3-203ENST00000494993 ZKSCAN1P17029 563 aaPredicted RBP26.77■■□□□ 1.88
HDDC3-203ENST00000494993 VCAM1P19320 739 aa26.77■■□□□ 1.88
HDDC3-203ENST00000494993 RGS2P41220 211 aa26.77■■□□□ 1.88
HDDC3-203ENST00000494993 GABPAQ06546 454 aa26.77■■□□□ 1.88
HDDC3-203ENST00000494993 MORN1Q5T089 497 aa26.77■■□□□ 1.88
HDDC3-203ENST00000494993 CATSPERGQ6ZRH7 1159 aa26.77■■□□□ 1.88
HDDC3-203ENST00000494993 SIRT2Q8IXJ6 389 aa26.77■■□□□ 1.88
HDDC3-203ENST00000494993 DNAJC2Q99543 621 aaKnown RBP26.77■■□□□ 1.88
HDDC3-203ENST00000494993 OGDHLQ9ULD0 1010 aa26.77■■□□□ 1.88
HDDC3-203ENST00000494993 COG6Q9Y2V7 657 aa26.77■■□□□ 1.88
HDDC3-203ENST00000494993 CNMDO75829 334 aa26.76■■□□□ 1.87
HDDC3-203ENST00000494993 GUCY1A2P33402 732 aa26.76■■□□□ 1.87
HDDC3-203ENST00000494993 MNX1P50219 401 aaPredicted RBP26.76■■□□□ 1.87
HDDC3-203ENST00000494993 NBPF3Q9H094 633 aa26.76■■□□□ 1.87
HDDC3-203ENST00000494993 ZBTB40Q9NUA8 1239 aa26.76■■□□□ 1.87
HDDC3-203ENST00000494993 MCM9Q9NXL9 1143 aa26.76■■□□□ 1.87
HDDC3-203ENST00000494993 RLFQ13129 1914 aa26.75■■□□□ 1.87
HDDC3-203ENST00000494993 TCRBV5S4A2TA0A5A2 114 aa26.75■■□□□ 1.87
HDDC3-203ENST00000494993 APBA2Q99767 749 aa26.75■■□□□ 1.87
HDDC3-203ENST00000494993 CWC22Q9HCG8 908 aaKnown RBP26.75■■□□□ 1.87
HDDC3-203ENST00000494993 RAB11FIP3O75154 756 aa26.74■■□□□ 1.87
HDDC3-203ENST00000494993 CCNA1P78396 465 aa26.74■■□□□ 1.87
HDDC3-203ENST00000494993 EVX2Q03828 476 aa26.74■■□□□ 1.87
HDDC3-203ENST00000494993 CACNB2Q08289 660 aaPredicted RBP26.74■■□□□ 1.87
HDDC3-203ENST00000494993 SEPT2Q15019 361 aa26.74■■□□□ 1.87
HDDC3-203ENST00000494993 CCL14Q16627 93 aa26.74■■□□□ 1.87
HDDC3-203ENST00000494993 LBX2Q6XYB7 198 aa26.74■■□□□ 1.87
HDDC3-203ENST00000494993 LCORLQ8N3X6 602 aa26.73■■□□□ 1.87
HDDC3-203ENST00000494993 SDR42E1Q8WUS8 393 aa26.73■■□□□ 1.87
HDDC3-203ENST00000494993 EDC3Q96F86 508 aaKnown RBP26.73■■□□□ 1.87
HDDC3-203ENST00000494993 C11orf49Q9H6J7 331 aa26.73■■□□□ 1.87
HDDC3-203ENST00000494993 DCP1AQ9NPI6 582 aaPredicted RBP26.73■■□□□ 1.87
HDDC3-203ENST00000494993 A0A1W2PPC1 479 aa26.72■■□□□ 1.87
HDDC3-203ENST00000494993 GLRX3O76003 335 aaKnown RBP26.72■■□□□ 1.87
HDDC3-203ENST00000494993 MAP2K5Q13163 448 aa26.72■■□□□ 1.87
HDDC3-203ENST00000494993 C7orf61Q8IZ16 206 aa26.72■■□□□ 1.87
HDDC3-203ENST00000494993 BCL11AQ9H165 835 aa26.72■■□□□ 1.87
HDDC3-203ENST00000494993 RPAP3Q9H6T3 665 aaPredicted RBP26.72■■□□□ 1.87
HDDC3-203ENST00000494993 A0A0G2JMZ2 1700 aa26.72■■□□□ 1.87
HDDC3-203ENST00000494993 PARP14Q460N5 1801 aa26.72■■□□□ 1.87
HDDC3-203ENST00000494993 SPDYE16A6NNV3 312 aaPredicted RBP26.71■■□□□ 1.87
HDDC3-203ENST00000494993 PAG1Q9NWQ8 432 aa26.71■■□□□ 1.87
HDDC3-203ENST00000494993 BTBD7Q9P203 1132 aa26.71■■□□□ 1.87
HDDC3-203ENST00000494993 STAP2Q9UGK3 403 aa26.71■■□□□ 1.87
HDDC3-203ENST00000494993 MPHOSPH10O00566 681 aaKnown RBP26.7■■□□□ 1.86
HDDC3-203ENST00000494993 CCND3P30281 292 aaPredicted RBP26.7■■□□□ 1.86
HDDC3-203ENST00000494993 WDR78Q5VTH9 848 aa26.7■■□□□ 1.86
HDDC3-203ENST00000494993 BOLA2Q9H3K6 86 aa26.7■■□□□ 1.86
HDDC3-203ENST00000494993 CHMP4BQ9H444 224 aaKnown RBP26.7■■□□□ 1.86
HDDC3-203ENST00000494993 ZNF236Q9UL36 1845 aa26.69■■□□□ 1.86
HDDC3-203ENST00000494993 A0A1W2PRG0 241 aa26.69■■□□□ 1.86
HDDC3-203ENST00000494993 SLC15A5A6NIM6 579 aa26.69■■□□□ 1.86
HDDC3-203ENST00000494993 CYP2D6P10635 497 aa26.69■■□□□ 1.86
HDDC3-203ENST00000494993 ARMT1Q9H993 441 aa26.69■■□□□ 1.86
HDDC3-203ENST00000494993 ATP5JP18859 108 aa26.68■■□□□ 1.86
HDDC3-203ENST00000494993 PTPREP23469 700 aa26.68■■□□□ 1.86
HDDC3-203ENST00000494993 ADD2P35612 726 aa26.68■■□□□ 1.86
HDDC3-203ENST00000494993 LHX8Q68G74 356 aa26.68■■□□□ 1.86
HDDC3-203ENST00000494993 SLC44A5Q8NCS7 719 aa26.68■■□□□ 1.86
HDDC3-203ENST00000494993 SWAP70Q9UH65 585 aa26.68■■□□□ 1.86
HDDC3-203ENST00000494993 PFASO15067 1338 aa26.67■■□□□ 1.86
HDDC3-203ENST00000494993 TMEM179Q6ZVK1 233 aa26.67■■□□□ 1.86
HDDC3-203ENST00000494993 ZMYND8Q9ULU4 1186 aaPredicted RBP26.67■■□□□ 1.86
HDDC3-203ENST00000494993 IVNS1ABPQ9Y6Y0 642 aa26.67■■□□□ 1.86
HDDC3-203ENST00000494993 ZNFX1Q9P2E3 1918 aaKnown RBP26.67■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms