RNA–Protein interactions for RNA: ENST00000494841.1

RPGR-210, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 1 (best)

Gene RPGR, Length 653 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-210ENST00000494841 TM4SF1P30408 202 aa9.48□□□□□ -0.89
RPGR-210ENST00000494841 TCIRG1Q13488 830 aa9.48□□□□□ -0.89
RPGR-210ENST00000494841 SYT9Q86SS6 491 aa9.48□□□□□ -0.89
RPGR-210ENST00000494841 GJD3Q8N144 294 aa9.48□□□□□ -0.89
RPGR-210ENST00000494841 NLGN1Q8N2Q7 840 aa9.48□□□□□ -0.89
RPGR-210ENST00000494841 BHMTQ93088 406 aa9.48□□□□□ -0.89
RPGR-210ENST00000494841 ACDQ96AP0 544 aa9.48□□□□□ -0.89
RPGR-210ENST00000494841 MYD88Q99836 296 aa9.48□□□□□ -0.89
RPGR-210ENST00000494841 OXCT2Q9BYC2 517 aaPredicted RBP9.48□□□□□ -0.89
RPGR-210ENST00000494841 ZFATQ9P243 1243 aa9.48□□□□□ -0.89
RPGR-210ENST00000494841 BCORQ6W2J9 1755 aa9.47□□□□□ -0.89
RPGR-210ENST00000494841 ARFGEF2Q9Y6D5 1785 aa9.47□□□□□ -0.89
RPGR-210ENST00000494841 MMP10P09238 476 aa9.47□□□□□ -0.89
RPGR-210ENST00000494841 PCBP4P57723 403 aaKnown RBP9.47□□□□□ -0.89
RPGR-210ENST00000494841 NFIXQ14938 502 aa9.47□□□□□ -0.89
RPGR-210ENST00000494841 SLC4A10Q6U841 1118 aa9.47□□□□□ -0.89
RPGR-210ENST00000494841 CLEC4GQ6UXB4 293 aa9.47□□□□□ -0.89
RPGR-210ENST00000494841 KRT25Q7Z3Z0 450 aa9.47□□□□□ -0.89
RPGR-210ENST00000494841 METTL22Q9BUU2 404 aaPredicted RBP9.47□□□□□ -0.89
RPGR-210ENST00000494841 EFCC1Q9HA90 598 aa9.47□□□□□ -0.89
RPGR-210ENST00000494841 BRPF3Q9ULD4 1205 aa9.47□□□□□ -0.89
RPGR-210ENST00000494841 NIP7Q9Y221 180 aaKnown RBP eCLIP9.47□□□□□ -0.89
RPGR-210ENST00000494841 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.47□□□□□ -0.89
RPGR-210ENST00000494841 SCN7AQ01118 1682 aa9.46□□□□□ -0.89
RPGR-210ENST00000494841 NDUFB5O43674 189 aa9.46□□□□□ -0.9
RPGR-210ENST00000494841 SASH3O75995 380 aa9.46□□□□□ -0.9
RPGR-210ENST00000494841 IGKV5-2P06315 115 aa9.46□□□□□ -0.9
RPGR-210ENST00000494841 ADH6P28332 368 aa9.46□□□□□ -0.9
RPGR-210ENST00000494841 DDR1Q08345 913 aa9.46□□□□□ -0.9
RPGR-210ENST00000494841 CWF19L2Q2TBE0 894 aaKnown RBP9.46□□□□□ -0.9
RPGR-210ENST00000494841 SUSD4Q5VX71 490 aa9.46□□□□□ -0.9
RPGR-210ENST00000494841 ZNF34Q8IZ26 560 aa9.46□□□□□ -0.9
RPGR-210ENST00000494841 DNAAF4Q8WXU2 420 aa9.46□□□□□ -0.9
RPGR-210ENST00000494841 JARID2Q92833 1246 aaPredicted RBP9.46□□□□□ -0.9
RPGR-210ENST00000494841 PNMA5Q96PV4 448 aa9.46□□□□□ -0.9
RPGR-210ENST00000494841 SETDB2Q96T68 719 aa9.46□□□□□ -0.9
RPGR-210ENST00000494841 MTFR1LQ9H019 292 aa9.46□□□□□ -0.9
RPGR-210ENST00000494841 GZF1Q9H116 711 aaPredicted RBP9.46□□□□□ -0.9
RPGR-210ENST00000494841 GGA1Q9UJY5 639 aa9.46□□□□□ -0.9
RPGR-210ENST00000494841 ZNF652Q9Y2D9 606 aa9.46□□□□□ -0.9
RPGR-210ENST00000494841 FNDC3AQ9Y2H6 1198 aaKnown RBP9.46□□□□□ -0.9
RPGR-210ENST00000494841 PTPRCP08575 1304 aa9.46□□□□□ -0.9
RPGR-210ENST00000494841 UBN2Q6ZU65 1347 aa9.46□□□□□ -0.9
RPGR-210ENST00000494841 A6NHS1 94 aa9.45□□□□□ -0.9
RPGR-210ENST00000494841 POLRMTO00411 1230 aaKnown RBP9.45□□□□□ -0.9
RPGR-210ENST00000494841 IPO8O15397 1037 aaKnown RBP9.45□□□□□ -0.9
RPGR-210ENST00000494841 SIN3BO75182 1162 aa9.45□□□□□ -0.9
RPGR-210ENST00000494841 RPLP1P05386 114 aaKnown RBP9.45□□□□□ -0.9
RPGR-210ENST00000494841 TRIM27P14373 513 aa9.45□□□□□ -0.9
RPGR-210ENST00000494841 PCSK2P16519 638 aa9.45□□□□□ -0.9
RPGR-210ENST00000494841 LORP23490 312 aaPredicted RBP9.45□□□□□ -0.9
RPGR-210ENST00000494841 TARSP26639 723 aaKnown RBP9.45□□□□□ -0.9
RPGR-210ENST00000494841 USP5P45974 858 aa9.45□□□□□ -0.9
RPGR-210ENST00000494841 HSP90AB3PQ58FF7 597 aa9.45□□□□□ -0.9
RPGR-210ENST00000494841 ZKSCAN2Q63HK3 967 aa9.45□□□□□ -0.9
RPGR-210ENST00000494841 ATF7IPQ6VMQ6 1270 aa9.45□□□□□ -0.9
RPGR-210ENST00000494841 SLCO4C1Q6ZQN7 724 aa9.45□□□□□ -0.9
RPGR-210ENST00000494841 NLRP10Q86W26 655 aa9.45□□□□□ -0.9
RPGR-210ENST00000494841 FCHSD1Q86WN1 690 aa9.45□□□□□ -0.9
RPGR-210ENST00000494841 SYNE4Q8N205 404 aa9.45□□□□□ -0.9
RPGR-210ENST00000494841 GOLGA6L1Q8N7Z2 621 aa9.45□□□□□ -0.9
RPGR-210ENST00000494841 WHAMMQ8TF30 809 aa9.45□□□□□ -0.9
RPGR-210ENST00000494841 ISCA1Q9BUE6 129 aa9.45□□□□□ -0.9
RPGR-210ENST00000494841 GDF2Q9UK05 429 aaPredicted RBP9.45□□□□□ -0.9
RPGR-210ENST00000494841 SUPT16HQ9Y5B9 1047 aaKnown RBP9.45□□□□□ -0.9
RPGR-210ENST00000494841 ANKRD36CQ5JPF3 1778 aa9.45□□□□□ -0.9
RPGR-210ENST00000494841 AFDNP55196 1824 aaKnown RBP9.45□□□□□ -0.9
RPGR-210ENST00000494841 NEURL1BA8MQ27 555 aa9.44□□□□□ -0.9
RPGR-210ENST00000494841 MAP3K6O95382 1288 aa9.44□□□□□ -0.9
RPGR-210ENST00000494841 SERPINB2P05120 415 aa9.44□□□□□ -0.9
RPGR-210ENST00000494841 RARAP10276 462 aa9.44□□□□□ -0.9
RPGR-210ENST00000494841 BEND3Q5T5X7 828 aa9.44□□□□□ -0.9
RPGR-210ENST00000494841 C20orf194Q5TEA3 1177 aa9.44□□□□□ -0.9
RPGR-210ENST00000494841 LYPD4Q6UWN0 246 aa9.44□□□□□ -0.9
RPGR-210ENST00000494841 PANK1Q8TE04 598 aa9.44□□□□□ -0.9
RPGR-210ENST00000494841 ARHGAP45Q92619 1136 aa9.44□□□□□ -0.9
RPGR-210ENST00000494841 MDFIQ99750 246 aa9.44□□□□□ -0.9
RPGR-210ENST00000494841 API5Q9BZZ5 524 aaKnown RBP9.44□□□□□ -0.9
RPGR-210ENST00000494841 SPON1Q9HCB6 807 aa9.44□□□□□ -0.9
RPGR-210ENST00000494841 DCTN4Q9UJW0 460 aa9.44□□□□□ -0.9
RPGR-210ENST00000494841 KIF16BQ96L93 1317 aa9.44□□□□□ -0.9
RPGR-210ENST00000494841 RLBP1P12271 317 aa9.43□□□□□ -0.9
RPGR-210ENST00000494841 NEXNQ0ZGT2 675 aa9.43□□□□□ -0.9
RPGR-210ENST00000494841 C8orf34Q49A92 452 aa9.43□□□□□ -0.9
RPGR-210ENST00000494841 PDE12Q6L8Q7 609 aaKnown RBP9.43□□□□□ -0.9
RPGR-210ENST00000494841 C1orf229Q6ZS94 237 aaPredicted RBP9.43□□□□□ -0.9
RPGR-210ENST00000494841 NBPF5PQ86XG9 351 aaPredicted RBP9.43□□□□□ -0.9
RPGR-210ENST00000494841 FAM89AQ96GI7 184 aa9.43□□□□□ -0.9
RPGR-210ENST00000494841 FAM129BQ96TA1 746 aa9.43□□□□□ -0.9
RPGR-210ENST00000494841 RBCK1Q9BYM8 510 aa9.43□□□□□ -0.9
RPGR-210ENST00000494841 TMEM63CQ9P1W3 806 aa9.43□□□□□ -0.9
RPGR-210ENST00000494841 COL24A1Q17RW2 1714 aa9.42□□□□□ -0.9
RPGR-210ENST00000494841 ATP10DQ9P241 1426 aa9.42□□□□□ -0.9
RPGR-210ENST00000494841 NTSR2O95665 410 aa9.42□□□□□ -0.9
RPGR-210ENST00000494841 IGHA2P01877 340 aa9.42□□□□□ -0.9
RPGR-210ENST00000494841 CELA2BP08218 269 aaPredicted RBP9.42□□□□□ -0.9
RPGR-210ENST00000494841 POLD1P28340 1107 aa9.42□□□□□ -0.9
RPGR-210ENST00000494841 TRIM28Q13263 835 aaKnown RBP9.42□□□□□ -0.9
RPGR-210ENST00000494841 GCKRQ14397 625 aa9.42□□□□□ -0.9
RPGR-210ENST00000494841 PARP10Q53GL7 1025 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms